RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 RANBP6O60518 1105 aaKnown RBP18.35■□□□□ 0.53
CSHL1-208ENST00000558609 PDE4AP27815 886 aa18.35■□□□□ 0.53
CSHL1-208ENST00000558609 CYP2C19P33261 490 aa18.35■□□□□ 0.53
CSHL1-208ENST00000558609 DIS3LQ8TF46 1054 aaKnown RBP18.35■□□□□ 0.53
CSHL1-208ENST00000558609 GMCL1Q96IK5 515 aa18.35■□□□□ 0.53
CSHL1-208ENST00000558609 TEX13BQ9BXU2 312 aa18.35■□□□□ 0.53
CSHL1-208ENST00000558609 DIAPH3Q9NSV4 1193 aa18.35■□□□□ 0.53
CSHL1-208ENST00000558609 ZNFX1Q9P2E3 1918 aaKnown RBP18.34■□□□□ 0.53
CSHL1-208ENST00000558609 NMT2O60551 498 aa18.34■□□□□ 0.53
CSHL1-208ENST00000558609 ZBED4O75132 1171 aa18.34■□□□□ 0.53
CSHL1-208ENST00000558609 BMP3P12645 472 aa18.34■□□□□ 0.53
CSHL1-208ENST00000558609 CWC27Q6UX04 472 aaKnown RBP18.34■□□□□ 0.53
CSHL1-208ENST00000558609 KIFC2Q96AC6 838 aa18.34■□□□□ 0.53
CSHL1-208ENST00000558609 MMP19Q99542 508 aa18.34■□□□□ 0.53
CSHL1-208ENST00000558609 NBPF3Q9H094 633 aa18.34■□□□□ 0.53
CSHL1-208ENST00000558609 STX8Q9UNK0 236 aa18.34■□□□□ 0.53
CSHL1-208ENST00000558609 MSCO60682 206 aa18.33■□□□□ 0.52
CSHL1-208ENST00000558609 FDX1P10109 184 aa18.33■□□□□ 0.52
CSHL1-208ENST00000558609 PCP11498 1178 aaKnown RBP18.33■□□□□ 0.52
CSHL1-208ENST00000558609 CYBAP13498 195 aa18.33■□□□□ 0.52
CSHL1-208ENST00000558609 KCTD2Q14681 263 aa18.33■□□□□ 0.52
CSHL1-208ENST00000558609 TRPV1Q8NER1 839 aa18.33■□□□□ 0.52
CSHL1-208ENST00000558609 MAML3Q96JK9 1138 aa18.33■□□□□ 0.52
CSHL1-208ENST00000558609 SLC38A10Q9HBR0 1119 aa18.33■□□□□ 0.52
CSHL1-208ENST00000558609 TCP11L1Q9NUJ3 509 aa18.33■□□□□ 0.52
CSHL1-208ENST00000558609 DIS3Q9Y2L1 958 aaKnown RBP18.33■□□□□ 0.52
CSHL1-208ENST00000558609 NR2E3Q9Y5X4 410 aa18.33■□□□□ 0.52
CSHL1-208ENST00000558609 LAMA3Q16787 3333 aa18.32■□□□□ 0.52
CSHL1-208ENST00000558609 TMEM232C9JQI7 657 aa18.32■□□□□ 0.52
CSHL1-208ENST00000558609 PLA2G6O60733 806 aa18.32■□□□□ 0.52
CSHL1-208ENST00000558609 SLC1A4P43007 532 aa18.32■□□□□ 0.52
CSHL1-208ENST00000558609 OAZ1P54368 228 aa18.32■□□□□ 0.52
CSHL1-208ENST00000558609 HAND2P61296 217 aa18.32■□□□□ 0.52
CSHL1-208ENST00000558609 AKNAD1Q5T1N1 836 aa18.32■□□□□ 0.52
CSHL1-208ENST00000558609 SNRNP48Q6IEG0 339 aaKnown RBP18.32■□□□□ 0.52
CSHL1-208ENST00000558609 CHURC1Q8WUH1 139 aa18.32■□□□□ 0.52
CSHL1-208ENST00000558609 STAG1Q8WVM7 1258 aa18.32■□□□□ 0.52
CSHL1-208ENST00000558609 TOMM22Q9NS69 142 aa18.32■□□□□ 0.52
CSHL1-208ENST00000558609 DDX20Q9UHI6 824 aaKnown RBP18.32■□□□□ 0.52
CSHL1-208ENST00000558609 RIPK3Q9Y572 518 aa18.32■□□□□ 0.52
CSHL1-208ENST00000558609 CTDP1Q9Y5B0 961 aaPredicted RBP18.32■□□□□ 0.52
CSHL1-208ENST00000558609 MCCP23508 829 aa18.31■□□□□ 0.52
CSHL1-208ENST00000558609 CNGA1P29973 690 aa18.31■□□□□ 0.52
CSHL1-208ENST00000558609 STAT2P52630 851 aa18.31■□□□□ 0.52
CSHL1-208ENST00000558609 ZNF792Q3KQV3 632 aa18.31■□□□□ 0.52
CSHL1-208ENST00000558609 TTC22Q5TAA0 569 aa18.31■□□□□ 0.52
CSHL1-208ENST00000558609 RCSD1Q6JBY9 416 aa18.31■□□□□ 0.52
CSHL1-208ENST00000558609 MFSD6Q6ZSS7 791 aa18.31■□□□□ 0.52
CSHL1-208ENST00000558609 FAM160B2Q86V87 743 aa18.31■□□□□ 0.52
CSHL1-208ENST00000558609 CPXCR1Q8N123 301 aa18.31■□□□□ 0.52
CSHL1-208ENST00000558609 C11orf49Q9H6J7 331 aa18.31■□□□□ 0.52
CSHL1-208ENST00000558609 EVI5O60447 810 aa18.3■□□□□ 0.52
CSHL1-208ENST00000558609 PGK2P07205 417 aa18.3■□□□□ 0.52
CSHL1-208ENST00000558609 COL6A1P12109 1028 aa18.3■□□□□ 0.52
CSHL1-208ENST00000558609 RRP12Q5JTH9 1297 aaKnown RBP18.3■□□□□ 0.52
CSHL1-208ENST00000558609 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.3■□□□□ 0.52
CSHL1-208ENST00000558609 TBC1D10CQ8IV04 446 aa18.3■□□□□ 0.52
CSHL1-208ENST00000558609 DSCC1Q9BVC3 393 aa18.3■□□□□ 0.52
CSHL1-208ENST00000558609 RNF41Q9H4P4 317 aaPredicted RBP18.3■□□□□ 0.52
CSHL1-208ENST00000558609 RAVER2Q9HCJ3 691 aaKnown RBP18.3■□□□□ 0.52
CSHL1-208ENST00000558609 ZNF213O14771 459 aa18.29■□□□□ 0.52
CSHL1-208ENST00000558609 TOP1P11387 765 aaKnown RBP18.29■□□□□ 0.52
CSHL1-208ENST00000558609 GSPT1P15170 499 aaKnown RBP18.29■□□□□ 0.52
CSHL1-208ENST00000558609 NT5C2P49902 561 aa18.29■□□□□ 0.52
CSHL1-208ENST00000558609 TTC14Q96N46 770 aa18.29■□□□□ 0.52
CSHL1-208ENST00000558609 FBXO40Q9UH90 709 aa18.29■□□□□ 0.52
CSHL1-208ENST00000558609 NRBP1Q9UHY1 535 aa18.29■□□□□ 0.52
CSHL1-208ENST00000558609 COL6A3P12111 3177 aa18.28■□□□□ 0.52
CSHL1-208ENST00000558609 A0A0C4DFX4 3053 aa18.28■□□□□ 0.52
CSHL1-208ENST00000558609 DNAJC25-GNG10A0A024R161 153 aa18.28■□□□□ 0.52
CSHL1-208ENST00000558609 SEPT4O43236 478 aa18.28■□□□□ 0.52
CSHL1-208ENST00000558609 PRAMEF19Q5SWL8 479 aa18.28■□□□□ 0.52
CSHL1-208ENST00000558609 KCTD1Q719H9 257 aa18.28■□□□□ 0.52
CSHL1-208ENST00000558609 CHST13Q8NET6 341 aa18.28■□□□□ 0.52
CSHL1-208ENST00000558609 DCAF4Q8WV16 495 aa18.28■□□□□ 0.52
CSHL1-208ENST00000558609 TMEM47Q9BQJ4 181 aa18.28■□□□□ 0.52
CSHL1-208ENST00000558609 TINF2Q9BSI4 451 aa18.28■□□□□ 0.52
CSHL1-208ENST00000558609 ISY1Q9ULR0 285 aaKnown RBP18.28■□□□□ 0.52
CSHL1-208ENST00000558609 PFASO15067 1338 aa18.27■□□□□ 0.52
CSHL1-208ENST00000558609 SOX1O00570 391 aaPredicted RBP18.27■□□□□ 0.52
CSHL1-208ENST00000558609 SLC4A3P48751 1232 aa18.27■□□□□ 0.52
CSHL1-208ENST00000558609 IKQ13123 557 aaPredicted RBP18.27■□□□□ 0.52
CSHL1-208ENST00000558609 MSL3Q8N5Y2 521 aaKnown RBP18.27■□□□□ 0.52
CSHL1-208ENST00000558609 ESR2Q92731 530 aa18.27■□□□□ 0.52
CSHL1-208ENST00000558609 CHMP4CQ96CF2 233 aa18.27■□□□□ 0.52
CSHL1-208ENST00000558609 DDX11Q96FC9 970 aa18.27■□□□□ 0.52
CSHL1-208ENST00000558609 CTNNA3Q9UI47 895 aa18.27■□□□□ 0.52
CSHL1-208ENST00000558609 FRMPD3Q5JV73 1810 aa18.27■□□□□ 0.52
CSHL1-208ENST00000558609 ALPK3Q96L96 1907 aa18.27■□□□□ 0.51
CSHL1-208ENST00000558609 PLXNA1Q9UIW2 1896 aa18.26■□□□□ 0.51
CSHL1-208ENST00000558609 ZNF536O15090 1300 aa18.26■□□□□ 0.51
CSHL1-208ENST00000558609 PRR12Q9ULL5 1215 aa18.26■□□□□ 0.51
CSHL1-208ENST00000558609 NEDD4P46934 1319 aa18.25■□□□□ 0.51
CSHL1-208ENST00000558609 DNM1LO00429 736 aa18.25■□□□□ 0.51
CSHL1-208ENST00000558609 IMMTQ16891 758 aaKnown RBP18.25■□□□□ 0.51
CSHL1-208ENST00000558609 TKFCQ3LXA3 575 aa18.25■□□□□ 0.51
CSHL1-208ENST00000558609 MAMDC4Q6UXC1 1216 aa18.25■□□□□ 0.51
CSHL1-208ENST00000558609 BTNL9Q6UXG8 535 aa18.25■□□□□ 0.51
CSHL1-208ENST00000558609 RASGRP2Q7LDG7 609 aa18.25■□□□□ 0.51
CSHL1-208ENST00000558609 ZNF467Q7Z7K2 595 aaPredicted RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms