RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 ATAD5Q96QE3 1844 aa14.2□□□□□ -0.14
HMGB1P8-201ENST00000558211 RANBP6O60518 1105 aaKnown RBP14.2□□□□□ -0.14
HMGB1P8-201ENST00000558211 GH2P01242 217 aa14.2□□□□□ -0.14
HMGB1P8-201ENST00000558211 RASA1P20936 1047 aa14.2□□□□□ -0.14
HMGB1P8-201ENST00000558211 CTHP32929 405 aa14.2□□□□□ -0.14
HMGB1P8-201ENST00000558211 ZNF157P51786 506 aaPredicted RBP14.2□□□□□ -0.14
HMGB1P8-201ENST00000558211 JAG1P78504 1218 aa14.2□□□□□ -0.14
HMGB1P8-201ENST00000558211 TRIM32Q13049 653 aa14.2□□□□□ -0.14
HMGB1P8-201ENST00000558211 RAB3GAP1Q15042 981 aa14.2□□□□□ -0.14
HMGB1P8-201ENST00000558211 LDLRAD1Q5T700 205 aa14.2□□□□□ -0.14
HMGB1P8-201ENST00000558211 SCYL3Q8IZE3 742 aa14.2□□□□□ -0.14
HMGB1P8-201ENST00000558211 STAG1Q8WVM7 1258 aa14.2□□□□□ -0.14
HMGB1P8-201ENST00000558211 RNF41Q9H4P4 317 aaPredicted RBP14.2□□□□□ -0.14
HMGB1P8-201ENST00000558211 PICK1Q9NRD5 415 aa14.2□□□□□ -0.14
HMGB1P8-201ENST00000558211 TSPY2A6NKD2 308 aa14.19□□□□□ -0.14
HMGB1P8-201ENST00000558211 ZBTB24O43167 697 aaPredicted RBP14.19□□□□□ -0.14
HMGB1P8-201ENST00000558211 EIF5BO60841 1220 aaKnown RBP14.19□□□□□ -0.14
HMGB1P8-201ENST00000558211 TFAP4Q01664 338 aa14.19□□□□□ -0.14
HMGB1P8-201ENST00000558211 DEFB115Q30KQ5 88 aa14.19□□□□□ -0.14
HMGB1P8-201ENST00000558211 RNF20Q5VTR2 975 aa14.19□□□□□ -0.14
HMGB1P8-201ENST00000558211 RGMBQ6NW40 437 aa14.19□□□□□ -0.14
HMGB1P8-201ENST00000558211 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.19□□□□□ -0.14
HMGB1P8-201ENST00000558211 SNCAIPQ9Y6H5 919 aa14.19□□□□□ -0.14
HMGB1P8-201ENST00000558211 DOCK1Q14185 1865 aa14.18□□□□□ -0.14
HMGB1P8-201ENST00000558211 NEDD4P46934 1319 aa14.18□□□□□ -0.14
HMGB1P8-201ENST00000558211 B4E1Z4 1266 aa14.18□□□□□ -0.14
HMGB1P8-201ENST00000558211 E7EWF7 191 aa14.18□□□□□ -0.14
HMGB1P8-201ENST00000558211 TSPY3P0CV98 308 aa14.18□□□□□ -0.14
HMGB1P8-201ENST00000558211 TSPY8P0CW00 308 aa14.18□□□□□ -0.14
HMGB1P8-201ENST00000558211 ZKSCAN1P17029 563 aaPredicted RBP14.18□□□□□ -0.14
HMGB1P8-201ENST00000558211 HSPA6P17066 643 aa14.18□□□□□ -0.14
HMGB1P8-201ENST00000558211 MCCP23508 829 aa14.18□□□□□ -0.14
HMGB1P8-201ENST00000558211 HSPA4P34932 840 aa14.18□□□□□ -0.14
HMGB1P8-201ENST00000558211 TRDNQ13061 729 aa14.18□□□□□ -0.14
HMGB1P8-201ENST00000558211 SEPT2Q15019 361 aa14.18□□□□□ -0.14
HMGB1P8-201ENST00000558211 CYP4F22Q6NT55 531 aa14.18□□□□□ -0.14
HMGB1P8-201ENST00000558211 STOX1Q6ZVD7 989 aa14.18□□□□□ -0.14
HMGB1P8-201ENST00000558211 EPS8L1Q8TE68 723 aa14.18□□□□□ -0.14
HMGB1P8-201ENST00000558211 CCDC17Q96LX7 622 aa14.18□□□□□ -0.14
HMGB1P8-201ENST00000558211 ZBTB21Q9ULJ3 1066 aa14.18□□□□□ -0.14
HMGB1P8-201ENST00000558211 ORC4O43929 436 aa14.17□□□□□ -0.14
HMGB1P8-201ENST00000558211 ASNSP08243 561 aa14.17□□□□□ -0.14
HMGB1P8-201ENST00000558211 PTPRAP18433 802 aa14.17□□□□□ -0.14
HMGB1P8-201ENST00000558211 ATP2B2Q01814 1243 aa14.17□□□□□ -0.14
HMGB1P8-201ENST00000558211 MCM6Q14566 821 aa14.17□□□□□ -0.14
HMGB1P8-201ENST00000558211 NR6A1Q15406 480 aa14.17□□□□□ -0.14
HMGB1P8-201ENST00000558211 NOL9Q5SY16 702 aaKnown RBP14.17□□□□□ -0.14
HMGB1P8-201ENST00000558211 RALYLQ86SE5 291 aaKnown RBP14.17□□□□□ -0.14
HMGB1P8-201ENST00000558211 CLEC10AQ8IUN9 316 aa14.17□□□□□ -0.14
HMGB1P8-201ENST00000558211 ESR2Q92731 530 aa14.17□□□□□ -0.14
HMGB1P8-201ENST00000558211 OPTNQ96CV9 577 aa14.17□□□□□ -0.14
HMGB1P8-201ENST00000558211 KRT23Q9C075 422 aa14.17□□□□□ -0.14
HMGB1P8-201ENST00000558211 ZHX2Q9Y6X8 837 aa14.17□□□□□ -0.14
HMGB1P8-201ENST00000558211 USP17L5A8MUK1 530 aa14.16□□□□□ -0.14
HMGB1P8-201ENST00000558211 CD2BP2O95400 341 aaKnown RBP14.16□□□□□ -0.14
HMGB1P8-201ENST00000558211 FGRP09769 529 aa14.16□□□□□ -0.14
HMGB1P8-201ENST00000558211 PCP11498 1178 aaKnown RBP14.16□□□□□ -0.14
HMGB1P8-201ENST00000558211 GUCY1A2P33402 732 aa14.16□□□□□ -0.14
HMGB1P8-201ENST00000558211 TMEM179Q6ZVK1 233 aa14.16□□□□□ -0.14
HMGB1P8-201ENST00000558211 ERO1BQ86YB8 467 aa14.16□□□□□ -0.14
HMGB1P8-201ENST00000558211 HOMEZQ8IX15 550 aa14.16□□□□□ -0.14
HMGB1P8-201ENST00000558211 NCOA7Q8NI08 942 aa14.16□□□□□ -0.14
HMGB1P8-201ENST00000558211 WNK4Q96J92 1243 aa14.16□□□□□ -0.14
HMGB1P8-201ENST00000558211 ZKSCAN3Q9BRR0 538 aa14.16□□□□□ -0.14
HMGB1P8-201ENST00000558211 CNNM2Q9H8M5 875 aa14.16□□□□□ -0.14
HMGB1P8-201ENST00000558211 SNX14Q9Y5W7 946 aa14.16□□□□□ -0.14
HMGB1P8-201ENST00000558211 UNCXA6NJT0 531 aa14.15□□□□□ -0.14
HMGB1P8-201ENST00000558211 TRIM75PA6NK02 468 aa14.15□□□□□ -0.14
HMGB1P8-201ENST00000558211 EPB41L2O43491 1005 aaKnown RBP14.15□□□□□ -0.14
HMGB1P8-201ENST00000558211 NMT2O60551 498 aa14.15□□□□□ -0.14
HMGB1P8-201ENST00000558211 ADCK5Q3MIX3 580 aa14.15□□□□□ -0.14
HMGB1P8-201ENST00000558211 CHST3Q7LGC8 479 aa14.15□□□□□ -0.14
HMGB1P8-201ENST00000558211 ZNF598Q86UK7 904 aaKnown RBP14.15□□□□□ -0.14
HMGB1P8-201ENST00000558211 RASAL3Q86YV0 1011 aa14.15□□□□□ -0.14
HMGB1P8-201ENST00000558211 NEDD1Q8NHV4 660 aa14.15□□□□□ -0.14
HMGB1P8-201ENST00000558211 BACH2Q9BYV9 841 aa14.15□□□□□ -0.14
HMGB1P8-201ENST00000558211 AS3MTQ9HBK9 375 aa14.15□□□□□ -0.14
HMGB1P8-201ENST00000558211 ZSWIM5Q9P217 1185 aa14.15□□□□□ -0.14
HMGB1P8-201ENST00000558211 RASSF10A6NK89 507 aa14.14□□□□□ -0.15
HMGB1P8-201ENST00000558211 ICA1Q05084 483 aa14.14□□□□□ -0.15
HMGB1P8-201ENST00000558211 PPATQ06203 517 aa14.14□□□□□ -0.15
HMGB1P8-201ENST00000558211 SPP2Q13103 211 aa14.14□□□□□ -0.15
HMGB1P8-201ENST00000558211 ZYXQ15942 572 aaKnown RBP14.14□□□□□ -0.15
HMGB1P8-201ENST00000558211 CYB5R4Q7L1T6 521 aa14.14□□□□□ -0.15
HMGB1P8-201ENST00000558211 ACER1Q8TDN7 264 aa14.14□□□□□ -0.15
HMGB1P8-201ENST00000558211 CEP95Q96GE4 821 aa14.14□□□□□ -0.15
HMGB1P8-201ENST00000558211 CAPNS2Q96L46 248 aa14.14□□□□□ -0.15
HMGB1P8-201ENST00000558211 JAKMIP1Q96N16 626 aaKnown RBP14.14□□□□□ -0.15
HMGB1P8-201ENST00000558211 UPF2Q9HAU5 1272 aaKnown RBP14.14□□□□□ -0.15
HMGB1P8-201ENST00000558211 GINM1Q9NU53 330 aa14.14□□□□□ -0.15
HMGB1P8-201ENST00000558211 CLIP2Q9UDT6 1046 aa14.14□□□□□ -0.15
HMGB1P8-201ENST00000558211 RAD21O60216 631 aa14.13□□□□□ -0.15
HMGB1P8-201ENST00000558211 EEF2P13639 858 aaKnown RBP14.13□□□□□ -0.15
HMGB1P8-201ENST00000558211 CPA1P15085 419 aa14.13□□□□□ -0.15
HMGB1P8-201ENST00000558211 ECE1P42892 770 aa14.13□□□□□ -0.15
HMGB1P8-201ENST00000558211 PPIL2Q13356 520 aa14.13□□□□□ -0.15
HMGB1P8-201ENST00000558211 COL9A3Q14050 684 aaPredicted RBP14.13□□□□□ -0.15
HMGB1P8-201ENST00000558211 KRT32Q14532 448 aa14.13□□□□□ -0.15
HMGB1P8-201ENST00000558211 IQCA1Q86XH1 822 aa14.13□□□□□ -0.15
HMGB1P8-201ENST00000558211 ZNF280CQ8ND82 737 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms