RNA–Protein interactions for RNA: ENST00000557685.5

EFCAB11-213, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-213ENST00000557685 PPP1R14AQ96A00 147 aa6.38□□□□□ -1.39
EFCAB11-213ENST00000557685 MRGPRX3Q96LB0 322 aa6.38□□□□□ -1.39
EFCAB11-213ENST00000557685 OSBPL1AQ9BXW6 950 aa6.38□□□□□ -1.39
EFCAB11-213ENST00000557685 GPR62Q9BZJ7 368 aa6.38□□□□□ -1.39
EFCAB11-213ENST00000557685 FANCLQ9NW38 375 aa6.38□□□□□ -1.39
EFCAB11-213ENST00000557685 LEMD3Q9Y2U8 911 aa6.38□□□□□ -1.39
EFCAB11-213ENST00000557685 EMC9Q9Y3B6 208 aa6.38□□□□□ -1.39
EFCAB11-213ENST00000557685 SBNO2Q9Y2G9 1366 aa6.38□□□□□ -1.39
EFCAB11-213ENST00000557685 CDC45O75419 566 aa6.37□□□□□ -1.39
EFCAB11-213ENST00000557685 SRFP11831 508 aa6.37□□□□□ -1.39
EFCAB11-213ENST00000557685 OXCT1P55809 520 aa6.37□□□□□ -1.39
EFCAB11-213ENST00000557685 NMIQ13287 307 aaPredicted RBP6.37□□□□□ -1.39
EFCAB11-213ENST00000557685 ARHGAP27Q6ZUM4 889 aa6.37□□□□□ -1.39
EFCAB11-213ENST00000557685 ZNF227Q86WZ6 799 aa6.37□□□□□ -1.39
EFCAB11-213ENST00000557685 SYNPOQ8N3V7 929 aa6.37□□□□□ -1.39
EFCAB11-213ENST00000557685 SHKBP1Q8TBC3 707 aa6.37□□□□□ -1.39
EFCAB11-213ENST00000557685 BRF1Q92994 677 aa6.37□□□□□ -1.39
EFCAB11-213ENST00000557685 CHST7Q9NS84 486 aa6.37□□□□□ -1.39
EFCAB11-213ENST00000557685 GFOD1Q9NXC2 390 aa6.37□□□□□ -1.39
EFCAB11-213ENST00000557685 SF3B6Q9Y3B4 125 aaKnown RBP6.37□□□□□ -1.39
EFCAB11-213ENST00000557685 PTCH2Q9Y6C5 1203 aa6.37□□□□□ -1.39
EFCAB11-213ENST00000557685 TRAV20A0A0B4J274 112 aa6.36□□□□□ -1.39
EFCAB11-213ENST00000557685 FAM155AB1AL88 458 aaPredicted RBP6.36□□□□□ -1.39
EFCAB11-213ENST00000557685 RBAK-RBAKDNI3L0D1 243 aa6.36□□□□□ -1.39
EFCAB11-213ENST00000557685 PAX4O43316 350 aa6.36□□□□□ -1.39
EFCAB11-213ENST00000557685 SSTR4P31391 388 aa6.36□□□□□ -1.39
EFCAB11-213ENST00000557685 PPP2R2AP63151 447 aa6.36□□□□□ -1.39
EFCAB11-213ENST00000557685 GRB10Q13322 594 aa6.36□□□□□ -1.39
EFCAB11-213ENST00000557685 TMEM67Q5HYA8 995 aa6.36□□□□□ -1.39
EFCAB11-213ENST00000557685 C16orf86Q6ZW13 317 aa6.36□□□□□ -1.39
EFCAB11-213ENST00000557685 TMC3Q7Z5M5 1100 aa6.36□□□□□ -1.39
EFCAB11-213ENST00000557685 KRTAP19-1Q8IUB9 90 aa6.36□□□□□ -1.39
EFCAB11-213ENST00000557685 TRIM59Q8IWR1 403 aa6.36□□□□□ -1.39
EFCAB11-213ENST00000557685 SCUBE1Q8IWY4 988 aa6.36□□□□□ -1.39
EFCAB11-213ENST00000557685 FIBCD1Q8N539 461 aa6.36□□□□□ -1.39
EFCAB11-213ENST00000557685 DAGLBQ8NCG7 672 aa6.36□□□□□ -1.39
EFCAB11-213ENST00000557685 ADCY4Q8NFM4 1077 aa6.36□□□□□ -1.39
EFCAB11-213ENST00000557685 DSCC1Q9BVC3 393 aa6.36□□□□□ -1.39
EFCAB11-213ENST00000557685 DUSP15Q9H1R2 295 aaPredicted RBP6.36□□□□□ -1.39
EFCAB11-213ENST00000557685 TRIT1Q9H3H1 467 aaKnown RBP6.36□□□□□ -1.39
EFCAB11-213ENST00000557685 NOL6Q9H6R4 1146 aaKnown RBP6.36□□□□□ -1.39
EFCAB11-213ENST00000557685 ARHGEF4Q9NR80 690 aa6.36□□□□□ -1.39
EFCAB11-213ENST00000557685 CGGBP1Q9UFW8 167 aaPredicted RBP6.36□□□□□ -1.39
EFCAB11-213ENST00000557685 PRAMEF1O95521 474 aa6.35□□□□□ -1.39
EFCAB11-213ENST00000557685 FGFR1P11362 822 aa6.35□□□□□ -1.39
EFCAB11-213ENST00000557685 PPP2R5DQ14738 602 aa6.35□□□□□ -1.39
EFCAB11-213ENST00000557685 NKPD1Q17RQ9 610 aa6.35□□□□□ -1.39
EFCAB11-213ENST00000557685 CLEC16AQ2KHT3 1053 aa6.35□□□□□ -1.39
EFCAB11-213ENST00000557685 KIAA0907Q7Z7F0 614 aaPredicted RBP6.35□□□□□ -1.39
EFCAB11-213ENST00000557685 ZNF655Q8N720 491 aaPredicted RBP6.35□□□□□ -1.39
EFCAB11-213ENST00000557685 CCDC140Q96MF4 163 aa6.35□□□□□ -1.39
EFCAB11-213ENST00000557685 IPO9Q96P70 1041 aaKnown RBP6.35□□□□□ -1.39
EFCAB11-213ENST00000557685 CDC6Q99741 560 aa6.35□□□□□ -1.39
EFCAB11-213ENST00000557685 AARSD1Q9BTE6 412 aaKnown RBP6.35□□□□□ -1.39
EFCAB11-213ENST00000557685 DHRS4Q9BTZ2 278 aa6.35□□□□□ -1.39
EFCAB11-213ENST00000557685 GPATCH2Q9NW75 528 aa6.35□□□□□ -1.39
EFCAB11-213ENST00000557685 ST14Q9Y5Y6 855 aa6.35□□□□□ -1.39
EFCAB11-213ENST00000557685 CYP26A1O43174 497 aa6.34□□□□□ -1.39
EFCAB11-213ENST00000557685 KCNH1O95259 989 aa6.34□□□□□ -1.39
EFCAB11-213ENST00000557685 GSNP06396 782 aa6.34□□□□□ -1.39
EFCAB11-213ENST00000557685 HOXC12P31275 282 aa6.34□□□□□ -1.39
EFCAB11-213ENST00000557685 TCEA2Q15560 299 aa6.34□□□□□ -1.39
EFCAB11-213ENST00000557685 ZNF662Q6ZS27 426 aa6.34□□□□□ -1.39
EFCAB11-213ENST00000557685 LGR4Q9BXB1 951 aa6.34□□□□□ -1.39
EFCAB11-213ENST00000557685 HDAC8Q9BY41 377 aa6.34□□□□□ -1.39
EFCAB11-213ENST00000557685 KRTAP9-9Q9BYP9 154 aa6.34□□□□□ -1.39
EFCAB11-213ENST00000557685 KRTAP9-4Q9BYQ2 154 aa6.34□□□□□ -1.39
EFCAB11-213ENST00000557685 LRRC4CQ9HCJ2 640 aa6.34□□□□□ -1.39
EFCAB11-213ENST00000557685 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.34□□□□□ -1.39
EFCAB11-213ENST00000557685 SNX11Q9Y5W9 270 aa6.34□□□□□ -1.39
EFCAB11-213ENST00000557685 TRBV23-1A0A0A0MS06 115 aa6.33□□□□□ -1.4
EFCAB11-213ENST00000557685 SHISA3A0PJX4 238 aa6.33□□□□□ -1.4
EFCAB11-213ENST00000557685 TBX1O43435 398 aa6.33□□□□□ -1.4
EFCAB11-213ENST00000557685 PABPC1P11940 636 aaKnown RBP6.33□□□□□ -1.4
EFCAB11-213ENST00000557685 NCLP19338 710 aaKnown RBP6.33□□□□□ -1.4
EFCAB11-213ENST00000557685 ITIH2P19823 946 aa6.33□□□□□ -1.4
EFCAB11-213ENST00000557685 NOP2P46087 812 aaKnown RBP6.33□□□□□ -1.4
EFCAB11-213ENST00000557685 CLCN7P51798 805 aa6.33□□□□□ -1.4
EFCAB11-213ENST00000557685 POU4F1Q01851 419 aa6.33□□□□□ -1.4
EFCAB11-213ENST00000557685 CDKAL1Q5VV42 579 aa6.33□□□□□ -1.4
EFCAB11-213ENST00000557685 FOXB2Q5VYV0 432 aa6.33□□□□□ -1.4
EFCAB11-213ENST00000557685 CWF19L1Q69YN2 538 aaKnown RBP6.33□□□□□ -1.4
EFCAB11-213ENST00000557685 GTF2IRD2BQ6EKJ0 949 aa6.33□□□□□ -1.4
EFCAB11-213ENST00000557685 NSMFQ6X4W1 530 aa6.33□□□□□ -1.4
EFCAB11-213ENST00000557685 THAP5Q7Z6K1 395 aa6.33□□□□□ -1.4
EFCAB11-213ENST00000557685 GTF2IRD2Q86UP8 949 aa6.33□□□□□ -1.4
EFCAB11-213ENST00000557685 TSPYL5Q86VY4 417 aaPredicted RBP6.33□□□□□ -1.4
EFCAB11-213ENST00000557685 ZDHHC13Q8IUH4 622 aa6.33□□□□□ -1.4
EFCAB11-213ENST00000557685 SPACA3Q8IXA5 215 aa6.33□□□□□ -1.4
EFCAB11-213ENST00000557685 FAM181AQ8N9Y4 354 aa6.33□□□□□ -1.4
EFCAB11-213ENST00000557685 NETO1Q8TDF5 533 aa6.33□□□□□ -1.4
EFCAB11-213ENST00000557685 KISS1RQ969F8 398 aaPredicted RBP6.33□□□□□ -1.4
EFCAB11-213ENST00000557685 FEZ1Q99689 392 aa6.33□□□□□ -1.4
EFCAB11-213ENST00000557685 SLKQ9H2G2 1235 aaPredicted RBP6.33□□□□□ -1.4
EFCAB11-213ENST00000557685 NKX2-4Q9H2Z4 354 aa6.33□□□□□ -1.4
EFCAB11-213ENST00000557685 TMX1Q9H3N1 280 aa6.33□□□□□ -1.4
EFCAB11-213ENST00000557685 CYP26B1Q9NR63 512 aa6.33□□□□□ -1.4
EFCAB11-213ENST00000557685 PIM2Q9P1W9 311 aa6.33□□□□□ -1.4
EFCAB11-213ENST00000557685 PLAGL2Q9UPG8 496 aa6.33□□□□□ -1.4
EFCAB11-213ENST00000557685 U3KQE9 123 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms