RNA–Protein interactions for RNA: ENST00000557641.5

GABRB3-212, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 828 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-212ENST00000557641 SCN4AP35499 1836 aa11.82□□□□□ -0.52
GABRB3-212ENST00000557641 POTECB2RU33 542 aa11.82□□□□□ -0.52
GABRB3-212ENST00000557641 PLA2G6O60733 806 aa11.82□□□□□ -0.52
GABRB3-212ENST00000557641 PPFIA3O75145 1194 aa11.82□□□□□ -0.52
GABRB3-212ENST00000557641 MMP1P03956 469 aa11.82□□□□□ -0.52
GABRB3-212ENST00000557641 GOLGA8HP0CJ92 632 aa11.82□□□□□ -0.52
GABRB3-212ENST00000557641 BMP3P12645 472 aa11.82□□□□□ -0.52
GABRB3-212ENST00000557641 CALML3P27482 149 aa11.82□□□□□ -0.52
GABRB3-212ENST00000557641 USP14P54578 494 aa11.82□□□□□ -0.52
GABRB3-212ENST00000557641 TRAF1Q13077 416 aa11.82□□□□□ -0.52
GABRB3-212ENST00000557641 RESTQ13127 1097 aa11.82□□□□□ -0.52
GABRB3-212ENST00000557641 FOXD4L5Q5VV16 416 aaPredicted RBP11.82□□□□□ -0.52
GABRB3-212ENST00000557641 MCTP1Q6DN14 999 aa11.82□□□□□ -0.52
GABRB3-212ENST00000557641 GALNT17Q6IS24 598 aa11.82□□□□□ -0.52
GABRB3-212ENST00000557641 CCDC148Q8NFR7 591 aa11.82□□□□□ -0.52
GABRB3-212ENST00000557641 FOXD4L4Q8WXT5 416 aaPredicted RBP11.82□□□□□ -0.52
GABRB3-212ENST00000557641 LPAR1Q92633 364 aa11.82□□□□□ -0.52
GABRB3-212ENST00000557641 ZNF396Q96N95 335 aaPredicted RBP11.82□□□□□ -0.52
GABRB3-212ENST00000557641 WRNIP1Q96S55 665 aa11.82□□□□□ -0.52
GABRB3-212ENST00000557641 KIAA1683Q9H0B3 1180 aa11.82□□□□□ -0.52
GABRB3-212ENST00000557641 VCPKMTQ9H867 229 aa11.82□□□□□ -0.52
GABRB3-212ENST00000557641 BRMS1Q9HCU9 246 aa11.82□□□□□ -0.52
GABRB3-212ENST00000557641 PICK1Q9NRD5 415 aa11.82□□□□□ -0.52
GABRB3-212ENST00000557641 SCAF8Q9UPN6 1271 aaKnown RBP11.82□□□□□ -0.52
GABRB3-212ENST00000557641 MTMR7Q9Y216 660 aa11.82□□□□□ -0.52
GABRB3-212ENST00000557641 A0A1W2PRG0 241 aa11.81□□□□□ -0.52
GABRB3-212ENST00000557641 UNCXA6NJT0 531 aa11.81□□□□□ -0.52
GABRB3-212ENST00000557641 DTNBO60941 627 aa11.81□□□□□ -0.52
GABRB3-212ENST00000557641 PPP1R37O75864 691 aa11.81□□□□□ -0.52
GABRB3-212ENST00000557641 NDUFB10O96000 172 aa11.81□□□□□ -0.52
GABRB3-212ENST00000557641 POTEJP0CG39 1038 aa11.81□□□□□ -0.52
GABRB3-212ENST00000557641 U2AF2P26368 475 aaKnown RBP eCLIP11.81□□□□□ -0.52
GABRB3-212ENST00000557641 INPP5BP32019 993 aa11.81□□□□□ -0.52
GABRB3-212ENST00000557641 IREB2P48200 963 aaKnown RBP11.81□□□□□ -0.52
GABRB3-212ENST00000557641 KRT85P78386 507 aa11.81□□□□□ -0.52
GABRB3-212ENST00000557641 MAP3K9P80192 1104 aa11.81□□□□□ -0.52
GABRB3-212ENST00000557641 KIF23Q02241 960 aaPredicted RBP11.81□□□□□ -0.52
GABRB3-212ENST00000557641 GNL2Q13823 731 aaKnown RBP11.81□□□□□ -0.52
GABRB3-212ENST00000557641 SHROOM1Q2M3G4 852 aaPredicted RBP11.81□□□□□ -0.52
GABRB3-212ENST00000557641 EAPPQ56P03 285 aaPredicted RBP11.81□□□□□ -0.52
GABRB3-212ENST00000557641 BTNL9Q6UXG8 535 aa11.81□□□□□ -0.52
GABRB3-212ENST00000557641 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.81□□□□□ -0.52
GABRB3-212ENST00000557641 CHURC1Q8WUH1 139 aa11.81□□□□□ -0.52
GABRB3-212ENST00000557641 PHF20Q9BVI0 1012 aa11.81□□□□□ -0.52
GABRB3-212ENST00000557641 FOXP1Q9H334 677 aaPredicted RBP11.81□□□□□ -0.52
GABRB3-212ENST00000557641 CFAP45Q9UL16 551 aa11.81□□□□□ -0.52
GABRB3-212ENST00000557641 MYH8P13535 1937 aa11.81□□□□□ -0.52
GABRB3-212ENST00000557641 FRMPD2Q68DX3 1309 aaPredicted RBP11.81□□□□□ -0.52
GABRB3-212ENST00000557641 PNMA6FA0A0J9YX94 578 aa11.8□□□□□ -0.52
GABRB3-212ENST00000557641 C19orf81C9J6K1 198 aa11.8□□□□□ -0.52
GABRB3-212ENST00000557641 USP17L10C9JJH3 530 aa11.8□□□□□ -0.52
GABRB3-212ENST00000557641 CYTH3O43739 400 aa11.8□□□□□ -0.52
GABRB3-212ENST00000557641 USP2O75604 605 aaPredicted RBP11.8□□□□□ -0.52
GABRB3-212ENST00000557641 PTPRAP18433 802 aa11.8□□□□□ -0.52
GABRB3-212ENST00000557641 GUCY1B3Q02153 619 aa11.8□□□□□ -0.52
GABRB3-212ENST00000557641 MAP3K11Q16584 847 aa11.8□□□□□ -0.52
GABRB3-212ENST00000557641 SKOR2Q2VWA4 1001 aaPredicted RBP11.8□□□□□ -0.52
GABRB3-212ENST00000557641 PRAMEF18Q5VWM3 479 aa11.8□□□□□ -0.52
GABRB3-212ENST00000557641 PPP1R18Q6NYC8 613 aa11.8□□□□□ -0.52
GABRB3-212ENST00000557641 FERMT3Q86UX7 667 aa11.8□□□□□ -0.52
GABRB3-212ENST00000557641 FAM160B2Q86V87 743 aa11.8□□□□□ -0.52
GABRB3-212ENST00000557641 TEX2Q8IWB9 1127 aa11.8□□□□□ -0.52
GABRB3-212ENST00000557641 ACER1Q8TDN7 264 aa11.8□□□□□ -0.52
GABRB3-212ENST00000557641 MTMR8Q96EF0 704 aa11.8□□□□□ -0.52
GABRB3-212ENST00000557641 CDCA5Q96FF9 252 aa11.8□□□□□ -0.52
GABRB3-212ENST00000557641 AIFM3Q96NN9 605 aa11.8□□□□□ -0.52
GABRB3-212ENST00000557641 FEZ1Q99689 392 aa11.8□□□□□ -0.52
GABRB3-212ENST00000557641 SCAND2PQ9GZW5 306 aaPredicted RBP11.8□□□□□ -0.52
GABRB3-212ENST00000557641 UBA5Q9GZZ9 404 aa11.8□□□□□ -0.52
GABRB3-212ENST00000557641 GPCPD1Q9NPB8 672 aa11.8□□□□□ -0.52
GABRB3-212ENST00000557641 SCUBE2Q9NQ36 999 aa11.8□□□□□ -0.52
GABRB3-212ENST00000557641 BARHL2Q9NY43 387 aa11.8□□□□□ -0.52
GABRB3-212ENST00000557641 ESYT2A0FGR8 921 aa11.79□□□□□ -0.52
GABRB3-212ENST00000557641 ADM5C9JUS6 153 aa11.79□□□□□ -0.52
GABRB3-212ENST00000557641 ZBTB5O15062 677 aa11.79□□□□□ -0.52
GABRB3-212ENST00000557641 WDR46O15213 610 aaKnown RBP11.79□□□□□ -0.52
GABRB3-212ENST00000557641 RAD21O60216 631 aa11.79□□□□□ -0.52
GABRB3-212ENST00000557641 ECE1P42892 770 aa11.79□□□□□ -0.52
GABRB3-212ENST00000557641 FOSBP53539 338 aa11.79□□□□□ -0.52
GABRB3-212ENST00000557641 NLRP5P59047 1200 aa11.79□□□□□ -0.52
GABRB3-212ENST00000557641 SLC35G1Q2M3R5 365 aa11.79□□□□□ -0.52
GABRB3-212ENST00000557641 OTUD7BQ6GQQ9 843 aa11.79□□□□□ -0.52
GABRB3-212ENST00000557641 KCTD1Q719H9 257 aa11.79□□□□□ -0.52
GABRB3-212ENST00000557641 DIS3L2Q8IYB7 885 aaKnown RBP11.79□□□□□ -0.52
GABRB3-212ENST00000557641 ADGRF4Q8IZF3 695 aa11.79□□□□□ -0.52
GABRB3-212ENST00000557641 TMEM87AQ8NBN3 555 aa11.79□□□□□ -0.52
GABRB3-212ENST00000557641 DAGLBQ8NCG7 672 aa11.79□□□□□ -0.52
GABRB3-212ENST00000557641 ZNF280CQ8ND82 737 aa11.79□□□□□ -0.52
GABRB3-212ENST00000557641 RBM46Q8TBY0 533 aaKnown RBP11.79□□□□□ -0.52
GABRB3-212ENST00000557641 GLT8D2Q9H1C3 349 aa11.79□□□□□ -0.52
GABRB3-212ENST00000557641 JMJD4Q9H9V9 463 aa11.79□□□□□ -0.52
GABRB3-212ENST00000557641 FEM1BQ9UK73 627 aa11.79□□□□□ -0.52
GABRB3-212ENST00000557641 CSADQ9Y600 493 aa11.79□□□□□ -0.52
GABRB3-212ENST00000557641 SSC5DA1L4H1 1573 aa11.79□□□□□ -0.52
GABRB3-212ENST00000557641 TMEM232C9JQI7 657 aa11.78□□□□□ -0.52
GABRB3-212ENST00000557641 GNA11P29992 359 aa11.78□□□□□ -0.52
GABRB3-212ENST00000557641 KRT2P35908 639 aa11.78□□□□□ -0.52
GABRB3-212ENST00000557641 STAT2P52630 851 aa11.78□□□□□ -0.52
GABRB3-212ENST00000557641 FKBP1BP68106 108 aa11.78□□□□□ -0.52
GABRB3-212ENST00000557641 DNM1Q05193 864 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms