RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 GPBAR1Q8TDU6 330 aa6.6□□□□□ -1.35
MTHFD1-216ENST00000557539 NUDT8Q8WV74 236 aa6.6□□□□□ -1.35
MTHFD1-216ENST00000557539 CEP89Q96ST8 783 aa6.6□□□□□ -1.35
MTHFD1-216ENST00000557539 IER2Q9BTL4 223 aa6.6□□□□□ -1.35
MTHFD1-216ENST00000557539 SLC52A1Q9NWF4 448 aa6.6□□□□□ -1.35
MTHFD1-216ENST00000557539 PCDHB10Q9UN67 800 aa6.6□□□□□ -1.35
MTHFD1-216ENST00000557539 FAN1Q9Y2M0 1017 aa6.6□□□□□ -1.35
MTHFD1-216ENST00000557539 ABCC5O15440 1437 aa6.59□□□□□ -1.35
MTHFD1-216ENST00000557539 NCOA3Q9Y6Q9 1424 aa6.59□□□□□ -1.35
MTHFD1-216ENST00000557539 PRR36Q9H6K5 1346 aa6.59□□□□□ -1.35
MTHFD1-216ENST00000557539 LTBP3Q9NS15 1303 aa6.59□□□□□ -1.35
MTHFD1-216ENST00000557539 GFRA2O00451 464 aa6.59□□□□□ -1.35
MTHFD1-216ENST00000557539 SOX1O00570 391 aaPredicted RBP6.59□□□□□ -1.35
MTHFD1-216ENST00000557539 LILRB5O75023 590 aa6.59□□□□□ -1.35
MTHFD1-216ENST00000557539 ACRP10323 421 aa6.59□□□□□ -1.35
MTHFD1-216ENST00000557539 MYCLP1P12525 358 aaPredicted RBP6.59□□□□□ -1.35
MTHFD1-216ENST00000557539 SELPP16109 830 aa6.59□□□□□ -1.35
MTHFD1-216ENST00000557539 EPHA1P21709 976 aa6.59□□□□□ -1.35
MTHFD1-216ENST00000557539 CDC27P30260 824 aa6.59□□□□□ -1.35
MTHFD1-216ENST00000557539 GSTM4Q03013 218 aa6.59□□□□□ -1.35
MTHFD1-216ENST00000557539 TRIM28Q13263 835 aaKnown RBP6.59□□□□□ -1.35
MTHFD1-216ENST00000557539 INPP5AQ14642 412 aa6.59□□□□□ -1.35
MTHFD1-216ENST00000557539 RSPO4Q2I0M5 234 aaPredicted RBP6.59□□□□□ -1.35
MTHFD1-216ENST00000557539 OVOS1Q6IE37 1185 aa6.59□□□□□ -1.35
MTHFD1-216ENST00000557539 GDF6Q6KF10 455 aaPredicted RBP6.59□□□□□ -1.35
MTHFD1-216ENST00000557539 FMNL3Q8IVF7 1028 aa6.59□□□□□ -1.35
MTHFD1-216ENST00000557539 NIM1KQ8IY84 436 aa6.59□□□□□ -1.35
MTHFD1-216ENST00000557539 TAB3Q8N5C8 712 aaPredicted RBP6.59□□□□□ -1.35
MTHFD1-216ENST00000557539 MFSD3Q96ES6 412 aa6.59□□□□□ -1.35
MTHFD1-216ENST00000557539 PLPPR2Q96GM1 343 aa6.59□□□□□ -1.35
MTHFD1-216ENST00000557539 SEMA6BQ9H3T3 888 aa6.59□□□□□ -1.35
MTHFD1-216ENST00000557539 TPSG1Q9NRR2 321 aa6.59□□□□□ -1.35
MTHFD1-216ENST00000557539 GMIPQ9P107 970 aa6.59□□□□□ -1.35
MTHFD1-216ENST00000557539 REV1Q9UBZ9 1251 aa6.59□□□□□ -1.35
MTHFD1-216ENST00000557539 KIDINS220Q9ULH0 1771 aa6.59□□□□□ -1.35
MTHFD1-216ENST00000557539 A0A0A0MRY4 1105 aa6.58□□□□□ -1.36
MTHFD1-216ENST00000557539 IRS4O14654 1257 aaPredicted RBP6.58□□□□□ -1.36
MTHFD1-216ENST00000557539 SUSD5O60279 629 aa6.58□□□□□ -1.36
MTHFD1-216ENST00000557539 NME1P15531 152 aaKnown RBP6.58□□□□□ -1.36
MTHFD1-216ENST00000557539 PLCG1P19174 1290 aa6.58□□□□□ -1.36
MTHFD1-216ENST00000557539 CDKN1CP49918 316 aaPredicted RBP6.58□□□□□ -1.36
MTHFD1-216ENST00000557539 AFF1P51825 1210 aaKnown RBP6.58□□□□□ -1.36
MTHFD1-216ENST00000557539 TM4SF20Q53R12 229 aa6.58□□□□□ -1.36
MTHFD1-216ENST00000557539 NKAPLQ5M9Q1 402 aa6.58□□□□□ -1.36
MTHFD1-216ENST00000557539 TRAPPC3LQ5T215 181 aa6.58□□□□□ -1.36
MTHFD1-216ENST00000557539 PSAPL1Q6NUJ1 521 aa6.58□□□□□ -1.36
MTHFD1-216ENST00000557539 KIAA1211LQ6NV74 962 aa6.58□□□□□ -1.36
MTHFD1-216ENST00000557539 LRFN4Q6PJG9 635 aa6.58□□□□□ -1.36
MTHFD1-216ENST00000557539 CHAC2Q8WUX2 184 aa6.58□□□□□ -1.36
MTHFD1-216ENST00000557539 SLC7A3Q8WY07 619 aa6.58□□□□□ -1.36
MTHFD1-216ENST00000557539 NINJ1Q92982 152 aa6.58□□□□□ -1.36
MTHFD1-216ENST00000557539 ATG4CQ96DT6 458 aa6.58□□□□□ -1.36
MTHFD1-216ENST00000557539 FAM126AQ9BYI3 521 aaPredicted RBP6.58□□□□□ -1.36
MTHFD1-216ENST00000557539 PHAXQ9H814 394 aaKnown RBP6.58□□□□□ -1.36
MTHFD1-216ENST00000557539 JPH1Q9HDC5 661 aaPredicted RBP6.58□□□□□ -1.36
MTHFD1-216ENST00000557539 ATP8A1Q9Y2Q0 1164 aa6.58□□□□□ -1.36
MTHFD1-216ENST00000557539 SLIT2O94813 1529 aa6.58□□□□□ -1.36
MTHFD1-216ENST00000557539 SLC22A31A6NKX4 558 aa6.57□□□□□ -1.36
MTHFD1-216ENST00000557539 ADCY3O60266 1144 aa6.57□□□□□ -1.36
MTHFD1-216ENST00000557539 HSPA8P11142 646 aaKnown RBP6.57□□□□□ -1.36
MTHFD1-216ENST00000557539 CBX2Q14781 532 aaPredicted RBP6.57□□□□□ -1.36
MTHFD1-216ENST00000557539 SLC10A6Q3KNW5 377 aa6.57□□□□□ -1.36
MTHFD1-216ENST00000557539 NLRC3Q7RTR2 1065 aa6.57□□□□□ -1.36
MTHFD1-216ENST00000557539 HDXQ7Z353 690 aa6.57□□□□□ -1.36
MTHFD1-216ENST00000557539 THNSL2Q86YJ6 484 aa6.57□□□□□ -1.36
MTHFD1-216ENST00000557539 LRRC47Q8N1G4 583 aaKnown RBP6.57□□□□□ -1.36
MTHFD1-216ENST00000557539 Q8N3U1 123 aa6.57□□□□□ -1.36
MTHFD1-216ENST00000557539 ZBTB38Q8NAP3 1195 aaPredicted RBP6.57□□□□□ -1.36
MTHFD1-216ENST00000557539 SLC9A7Q96T83 725 aa6.57□□□□□ -1.36
MTHFD1-216ENST00000557539 LPIN3Q9BQK8 851 aa6.57□□□□□ -1.36
MTHFD1-216ENST00000557539 CORO1BQ9BR76 489 aa6.57□□□□□ -1.36
MTHFD1-216ENST00000557539 CACNA2D2Q9NY47 1150 aa6.57□□□□□ -1.36
MTHFD1-216ENST00000557539 SNCAIPQ9Y6H5 919 aa6.57□□□□□ -1.36
MTHFD1-216ENST00000557539 IQCA1LA6NCM1 817 aa6.56□□□□□ -1.36
MTHFD1-216ENST00000557539 H3BRJ5 948 aa6.56□□□□□ -1.36
MTHFD1-216ENST00000557539 DNAJA2O60884 412 aa6.56□□□□□ -1.36
MTHFD1-216ENST00000557539 ECEL1O95672 775 aa6.56□□□□□ -1.36
MTHFD1-216ENST00000557539 MAP4K4O95819 1239 aaPredicted RBP6.56□□□□□ -1.36
MTHFD1-216ENST00000557539 SOX10P56693 466 aa6.56□□□□□ -1.36
MTHFD1-216ENST00000557539 PABPC4Q13310 644 aaKnown RBP eCLIP6.56□□□□□ -1.36
MTHFD1-216ENST00000557539 GRIK5Q16478 980 aa6.56□□□□□ -1.36
MTHFD1-216ENST00000557539 LONRF2Q1L5Z9 754 aa6.56□□□□□ -1.36
MTHFD1-216ENST00000557539 GNPTABQ3T906 1256 aa6.56□□□□□ -1.36
MTHFD1-216ENST00000557539 CT47A1Q5JQC4 288 aaPredicted RBP6.56□□□□□ -1.36
MTHFD1-216ENST00000557539 INTS3Q68E01 1043 aaKnown RBP6.56□□□□□ -1.36
MTHFD1-216ENST00000557539 ELMO3Q96BJ8 720 aa6.56□□□□□ -1.36
MTHFD1-216ENST00000557539 CCDC86Q9H6F5 360 aaKnown RBP6.56□□□□□ -1.36
MTHFD1-216ENST00000557539 KLHL3Q9UH77 587 aa6.56□□□□□ -1.36
MTHFD1-216ENST00000557539 RAPGEFL1Q9UHV5 662 aa6.56□□□□□ -1.36
MTHFD1-216ENST00000557539 TMEM131LA2VDJ0 1609 aa6.56□□□□□ -1.36
MTHFD1-216ENST00000557539 MEGF6O75095 1541 aa6.55□□□□□ -1.36
MTHFD1-216ENST00000557539 MYOM2P54296 1465 aa6.55□□□□□ -1.36
MTHFD1-216ENST00000557539 CYP11A1P05108 521 aa6.55□□□□□ -1.36
MTHFD1-216ENST00000557539 L1CAMP32004 1257 aa6.55□□□□□ -1.36
MTHFD1-216ENST00000557539 STAT3P40763 770 aa6.55□□□□□ -1.36
MTHFD1-216ENST00000557539 SLC7A5Q01650 507 aa6.55□□□□□ -1.36
MTHFD1-216ENST00000557539 PDE4BQ07343 736 aa6.55□□□□□ -1.36
MTHFD1-216ENST00000557539 FAM50AQ14320 339 aaKnown RBP6.55□□□□□ -1.36
MTHFD1-216ENST00000557539 POU4F3Q15319 338 aa6.55□□□□□ -1.36
MTHFD1-216ENST00000557539 BRDTQ58F21 947 aaPredicted RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms