RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 CD320Q9NPF0 282 aa15.02■□□□□ -0
SHMT2-230ENST00000557427 PRRC2BQ5JSZ5 2229 aaKnown RBP15.02□□□□□ -0.01
SHMT2-230ENST00000557427 A0A0G2JMZ2 1700 aa15.02□□□□□ -0.01
SHMT2-230ENST00000557427 TRANK1O15050 2925 aa15.02□□□□□ -0.01
SHMT2-230ENST00000557427 ZNFX1Q9P2E3 1918 aaKnown RBP15.02□□□□□ -0.01
SHMT2-230ENST00000557427 ROBO3Q96MS0 1386 aa15.01□□□□□ -0.01
SHMT2-230ENST00000557427 A0A1W2PRG0 241 aa15.01□□□□□ -0.01
SHMT2-230ENST00000557427 MYADML2A6NDP7 307 aa15.01□□□□□ -0.01
SHMT2-230ENST00000557427 RFXAPO00287 272 aa15.01□□□□□ -0.01
SHMT2-230ENST00000557427 IDH1O75874 414 aaKnown RBP15.01□□□□□ -0.01
SHMT2-230ENST00000557427 BAG3O95817 575 aa15.01□□□□□ -0.01
SHMT2-230ENST00000557427 KCNA10Q16322 511 aa15.01□□□□□ -0.01
SHMT2-230ENST00000557427 KIAA1755Q5JYT7 1200 aa15.01□□□□□ -0.01
SHMT2-230ENST00000557427 PSRC1Q6PGN9 363 aaPredicted RBP15.01□□□□□ -0.01
SHMT2-230ENST00000557427 PPP1R12CQ9BZL4 782 aa15.01□□□□□ -0.01
SHMT2-230ENST00000557427 ANTXR1Q9H6X2 564 aa15.01□□□□□ -0.01
SHMT2-230ENST00000557427 SLC5A4Q9NY91 659 aa15.01□□□□□ -0.01
SHMT2-230ENST00000557427 NRBP1Q9UHY1 535 aa15.01□□□□□ -0.01
SHMT2-230ENST00000557427 LRRC37A2A6NM11 1700 aa15□□□□□ -0.01
SHMT2-230ENST00000557427 SYNRGQ9UMZ2 1314 aa15□□□□□ -0.01
SHMT2-230ENST00000557427 PI4K2BG5E9Z4 385 aa15□□□□□ -0.01
SHMT2-230ENST00000557427 SMARCA5O60264 1052 aaPredicted RBP15□□□□□ -0.01
SHMT2-230ENST00000557427 PGK2P07205 417 aa15□□□□□ -0.01
SHMT2-230ENST00000557427 DYNLL1P63167 89 aaKnown RBP15□□□□□ -0.01
SHMT2-230ENST00000557427 SKIV2LQ15477 1246 aaKnown RBP15□□□□□ -0.01
SHMT2-230ENST00000557427 CCDC174Q6PII3 467 aa15□□□□□ -0.01
SHMT2-230ENST00000557427 NCAPG2Q86XI2 1143 aa15□□□□□ -0.01
SHMT2-230ENST00000557427 TMEM199Q8N511 208 aa15□□□□□ -0.01
SHMT2-230ENST00000557427 NUP133Q8WUM0 1156 aa15□□□□□ -0.01
SHMT2-230ENST00000557427 TINF2Q9BSI4 451 aa15□□□□□ -0.01
SHMT2-230ENST00000557427 MROH8Q9H579 483 aa15□□□□□ -0.01
SHMT2-230ENST00000557427 HOXC10Q9NYD6 342 aa15□□□□□ -0.01
SHMT2-230ENST00000557427 MTCH2Q9Y6C9 303 aa15□□□□□ -0.01
SHMT2-230ENST00000557427 SMIM22K7EJ46 135 aa14.99□□□□□ -0.01
SHMT2-230ENST00000557427 HLA-DOAP06340 250 aa14.99□□□□□ -0.01
SHMT2-230ENST00000557427 AKR1A1P14550 325 aa14.99□□□□□ -0.01
SHMT2-230ENST00000557427 PLCG2P16885 1265 aa14.99□□□□□ -0.01
SHMT2-230ENST00000557427 POU3F3P20264 500 aaPredicted RBP14.99□□□□□ -0.01
SHMT2-230ENST00000557427 CYP7A1P22680 504 aa14.99□□□□□ -0.01
SHMT2-230ENST00000557427 CYP2C18P33260 490 aa14.99□□□□□ -0.01
SHMT2-230ENST00000557427 ABCB5Q2M3G0 1257 aa14.99□□□□□ -0.01
SHMT2-230ENST00000557427 KRT40Q6A162 431 aa14.99□□□□□ -0.01
SHMT2-230ENST00000557427 CHD1LQ86WJ1 897 aa14.99□□□□□ -0.01
SHMT2-230ENST00000557427 DDRGK1Q96HY6 314 aa14.99□□□□□ -0.01
SHMT2-230ENST00000557427 IL23AQ9NPF7 189 aa14.99□□□□□ -0.01
SHMT2-230ENST00000557427 MOXD2PA6NHM9 499 aa14.98□□□□□ -0.01
SHMT2-230ENST00000557427 FCER1AP12319 257 aa14.98□□□□□ -0.01
SHMT2-230ENST00000557427 DSG3P32926 999 aa14.98□□□□□ -0.01
SHMT2-230ENST00000557427 PLS1Q14651 629 aa14.98□□□□□ -0.01
SHMT2-230ENST00000557427 ZNF792Q3KQV3 632 aa14.98□□□□□ -0.01
SHMT2-230ENST00000557427 CERKLQ49MI3 558 aaPredicted RBP14.98□□□□□ -0.01
SHMT2-230ENST00000557427 OTOP2Q7RTS6 562 aa14.98□□□□□ -0.01
SHMT2-230ENST00000557427 FAM126BQ8IXS8 530 aa14.98□□□□□ -0.01
SHMT2-230ENST00000557427 MAGEB6Q8N7X4 407 aa14.98□□□□□ -0.01
SHMT2-230ENST00000557427 DNAJC2Q99543 621 aaKnown RBP14.98□□□□□ -0.01
SHMT2-230ENST00000557427 ELP1O95163 1332 aa14.97□□□□□ -0.01
SHMT2-230ENST00000557427 UMODL1Q5DID0 1318 aa14.97□□□□□ -0.01
SHMT2-230ENST00000557427 EPOPA6NHQ4 379 aa14.97□□□□□ -0.01
SHMT2-230ENST00000557427 FGBP02675 491 aa14.97□□□□□ -0.01
SHMT2-230ENST00000557427 SHMT1P34896 483 aa14.97□□□□□ -0.01
SHMT2-230ENST00000557427 SEPT2Q15019 361 aa14.97□□□□□ -0.01
SHMT2-230ENST00000557427 PPP2R2DQ66LE6 453 aa14.97□□□□□ -0.01
SHMT2-230ENST00000557427 MIGA1Q8NAN2 632 aa14.97□□□□□ -0.01
SHMT2-230ENST00000557427 VWCEQ96DN2 955 aa14.97□□□□□ -0.01
SHMT2-230ENST00000557427 ATG4CQ96DT6 458 aa14.97□□□□□ -0.01
SHMT2-230ENST00000557427 LRRCC1Q9C099 1032 aa14.97□□□□□ -0.01
SHMT2-230ENST00000557427 TANGO6Q9C0B7 1094 aa14.97□□□□□ -0.01
SHMT2-230ENST00000557427 DCTPP1Q9H773 170 aa14.97□□□□□ -0.01
SHMT2-230ENST00000557427 SERPINB13Q9UIV8 391 aa14.97□□□□□ -0.01
SHMT2-230ENST00000557427 MYH1P12882 1939 aa14.96□□□□□ -0.01
SHMT2-230ENST00000557427 GOLIM4O00461 696 aa14.96□□□□□ -0.01
SHMT2-230ENST00000557427 ADCY6O43306 1168 aa14.96□□□□□ -0.01
SHMT2-230ENST00000557427 CD4P01730 458 aa14.96□□□□□ -0.01
SHMT2-230ENST00000557427 TMEM132BQ14DG7 1078 aa14.96□□□□□ -0.01
SHMT2-230ENST00000557427 EHD4Q9H223 541 aa14.96□□□□□ -0.01
SHMT2-230ENST00000557427 BOLA2Q9H3K6 86 aa14.96□□□□□ -0.01
SHMT2-230ENST00000557427 COG5Q9UP83 839 aa14.96□□□□□ -0.01
SHMT2-230ENST00000557427 MYO5AQ9Y4I1 1855 aaKnown RBP14.96□□□□□ -0.01
SHMT2-230ENST00000557427 MROH7Q68CQ1 1323 aa14.95□□□□□ -0.02
SHMT2-230ENST00000557427 WDFY4Q6ZS81 3184 aa14.95□□□□□ -0.02
SHMT2-230ENST00000557427 ARVCFO00192 962 aa14.95□□□□□ -0.02
SHMT2-230ENST00000557427 ASGR1P07306 291 aa14.95□□□□□ -0.02
SHMT2-230ENST00000557427 PLCD1P51178 756 aa14.95□□□□□ -0.02
SHMT2-230ENST00000557427 NHLH1Q02575 133 aa14.95□□□□□ -0.02
SHMT2-230ENST00000557427 EVX2Q03828 476 aa14.95□□□□□ -0.02
SHMT2-230ENST00000557427 MB21D1Q8N884 522 aa14.95□□□□□ -0.02
SHMT2-230ENST00000557427 GLT1D1Q96MS3 346 aa14.95□□□□□ -0.02
SHMT2-230ENST00000557427 MMP19Q99542 508 aa14.95□□□□□ -0.02
SHMT2-230ENST00000557427 CERS4Q9HA82 394 aa14.95□□□□□ -0.02
SHMT2-230ENST00000557427 ZBTB47Q9UFB7 747 aaPredicted RBP14.95□□□□□ -0.02
SHMT2-230ENST00000557427 DIS3Q9Y2L1 958 aaKnown RBP14.95□□□□□ -0.02
SHMT2-230ENST00000557427 PCDHA11Q9Y5I1 949 aa14.95□□□□□ -0.02
SHMT2-230ENST00000557427 PRR33A8MZF0 331 aa14.94□□□□□ -0.02
SHMT2-230ENST00000557427 SNAI1O95863 264 aaPredicted RBP14.94□□□□□ -0.02
SHMT2-230ENST00000557427 CST5P28325 142 aaPredicted RBP14.94□□□□□ -0.02
SHMT2-230ENST00000557427 TTF1Q15361 905 aaPredicted RBP14.94□□□□□ -0.02
SHMT2-230ENST00000557427 SLC9C2Q5TAH2 1124 aa14.94□□□□□ -0.02
SHMT2-230ENST00000557427 ANKRD45Q5TZF3 282 aa14.94□□□□□ -0.02
SHMT2-230ENST00000557427 LNPKQ9C0E8 428 aa14.94□□□□□ -0.02
SHMT2-230ENST00000557427 CABP5Q9NP86 173 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms