RNA–Protein interactions for RNA: ENST00000557382.1

PPP4R3A-212, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 844 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-212ENST00000557382 STXBP3O00186 592 aa10.14□□□□□ -0.79
PPP4R3A-212ENST00000557382 CDK11BP21127 795 aaKnown RBP10.14□□□□□ -0.79
PPP4R3A-212ENST00000557382 GNA11P29992 359 aa10.14□□□□□ -0.79
PPP4R3A-212ENST00000557382 HOXA7P31268 230 aaPredicted RBP10.14□□□□□ -0.79
PPP4R3A-212ENST00000557382 HSPA1LP34931 641 aa10.14□□□□□ -0.79
PPP4R3A-212ENST00000557382 FKBP1AP62942 108 aaKnown RBP10.14□□□□□ -0.79
PPP4R3A-212ENST00000557382 CUL4BQ13620 913 aa10.14□□□□□ -0.79
PPP4R3A-212ENST00000557382 WWC2Q6AWC2 1192 aa10.14□□□□□ -0.79
PPP4R3A-212ENST00000557382 PDXDC2PQ6P474 469 aa10.14□□□□□ -0.79
PPP4R3A-212ENST00000557382 USP17L1Q7RTZ2 530 aa10.14□□□□□ -0.79
PPP4R3A-212ENST00000557382 STAG2Q8N3U4 1231 aa10.14□□□□□ -0.79
PPP4R3A-212ENST00000557382 KIF18AQ8NI77 898 aa10.14□□□□□ -0.79
PPP4R3A-212ENST00000557382 RRP36Q96EU6 259 aaKnown RBP10.14□□□□□ -0.79
PPP4R3A-212ENST00000557382 AK8Q96MA6 479 aa10.14□□□□□ -0.79
PPP4R3A-212ENST00000557382 MRIQ9BWK5 157 aa10.14□□□□□ -0.79
PPP4R3A-212ENST00000557382 C6orf50Q9HD87 102 aa10.14□□□□□ -0.79
PPP4R3A-212ENST00000557382 SWAP70Q9UH65 585 aa10.14□□□□□ -0.79
PPP4R3A-212ENST00000557382 PCDHA6Q9UN73 950 aa10.14□□□□□ -0.79
PPP4R3A-212ENST00000557382 DAGLAQ9Y4D2 1042 aa10.14□□□□□ -0.79
PPP4R3A-212ENST00000557382 PCDHA8Q9Y5H6 950 aa10.14□□□□□ -0.79
PPP4R3A-212ENST00000557382 GREB1LQ9C091 1923 aaPredicted RBP10.13□□□□□ -0.79
PPP4R3A-212ENST00000557382 A0A1B0GTH6 734 aa10.13□□□□□ -0.79
PPP4R3A-212ENST00000557382 GOLGA6L9A6NEM1 432 aa10.13□□□□□ -0.79
PPP4R3A-212ENST00000557382 PPP1R3GB7ZBB8 358 aa10.13□□□□□ -0.79
PPP4R3A-212ENST00000557382 C6orf229H3BNL8 230 aa10.13□□□□□ -0.79
PPP4R3A-212ENST00000557382 WNT7AO00755 349 aa10.13□□□□□ -0.79
PPP4R3A-212ENST00000557382 PLSCR1O15162 318 aa10.13□□□□□ -0.79
PPP4R3A-212ENST00000557382 ARHGAP6O43182 974 aa10.13□□□□□ -0.79
PPP4R3A-212ENST00000557382 CYTH3O43739 400 aa10.13□□□□□ -0.79
PPP4R3A-212ENST00000557382 MCM7P33993 719 aa10.13□□□□□ -0.79
PPP4R3A-212ENST00000557382 PDE6BP35913 854 aa10.13□□□□□ -0.79
PPP4R3A-212ENST00000557382 GABPAQ06546 454 aa10.13□□□□□ -0.79
PPP4R3A-212ENST00000557382 FMR1Q06787 632 aaKnown RBP eCLIP10.13□□□□□ -0.79
PPP4R3A-212ENST00000557382 SPAG1Q07617 926 aa10.13□□□□□ -0.79
PPP4R3A-212ENST00000557382 KCNB1Q14721 858 aa10.13□□□□□ -0.79
PPP4R3A-212ENST00000557382 NR1I3Q14994 352 aa10.13□□□□□ -0.79
PPP4R3A-212ENST00000557382 TXNRD1Q16881 649 aa10.13□□□□□ -0.79
PPP4R3A-212ENST00000557382 ASPRV1Q53RT3 343 aa10.13□□□□□ -0.79
PPP4R3A-212ENST00000557382 CDKAL1Q5VV42 579 aa10.13□□□□□ -0.79
PPP4R3A-212ENST00000557382 E4F1Q66K89 784 aaPredicted RBP10.13□□□□□ -0.79
PPP4R3A-212ENST00000557382 SPECC1LQ69YQ0 1117 aa10.13□□□□□ -0.79
PPP4R3A-212ENST00000557382 HHIPL2Q6UWX4 724 aa10.13□□□□□ -0.79
PPP4R3A-212ENST00000557382 DTHD1Q6ZMT9 781 aa10.13□□□□□ -0.79
PPP4R3A-212ENST00000557382 DPF2Q92785 391 aa10.13□□□□□ -0.79
PPP4R3A-212ENST00000557382 RIOX1Q9H6W3 641 aa10.13□□□□□ -0.79
PPP4R3A-212ENST00000557382 SAP30BPQ9UHR5 308 aaKnown RBP10.13□□□□□ -0.79
PPP4R3A-212ENST00000557382 STX8Q9UNK0 236 aa10.13□□□□□ -0.79
PPP4R3A-212ENST00000557382 SYNRGQ9UMZ2 1314 aa10.12□□□□□ -0.79
PPP4R3A-212ENST00000557382 IGKV6D-41A0A0C4DH26 115 aa10.12□□□□□ -0.79
PPP4R3A-212ENST00000557382 SPDYE2BA6NHP3 402 aa10.12□□□□□ -0.79
PPP4R3A-212ENST00000557382 ZSCAN12O43309 604 aa10.12□□□□□ -0.79
PPP4R3A-212ENST00000557382 STX10O60499 249 aa10.12□□□□□ -0.79
PPP4R3A-212ENST00000557382 SPDYE6P0CI01 402 aa10.12□□□□□ -0.79
PPP4R3A-212ENST00000557382 SNHG28P0DPA3 235 aa10.12□□□□□ -0.79
PPP4R3A-212ENST00000557382 SRGNP10124 158 aa10.12□□□□□ -0.79
PPP4R3A-212ENST00000557382 PPP1R2P41236 205 aa10.12□□□□□ -0.79
PPP4R3A-212ENST00000557382 AFMP43652 599 aa10.12□□□□□ -0.79
PPP4R3A-212ENST00000557382 IL17AQ16552 155 aa10.12□□□□□ -0.79
PPP4R3A-212ENST00000557382 SLC35G1Q2M3R5 365 aa10.12□□□□□ -0.79
PPP4R3A-212ENST00000557382 SPDYE2Q495Y8 402 aa10.12□□□□□ -0.79
PPP4R3A-212ENST00000557382 FILIP1LQ4L180 1135 aa10.12□□□□□ -0.79
PPP4R3A-212ENST00000557382 NOM1Q5C9Z4 860 aaKnown RBP10.12□□□□□ -0.79
PPP4R3A-212ENST00000557382 SOGA3Q5TF21 947 aa10.12□□□□□ -0.79
PPP4R3A-212ENST00000557382 ZNF658Q5TYW1 1059 aaPredicted RBP10.12□□□□□ -0.79
PPP4R3A-212ENST00000557382 PPP1R18Q6NYC8 613 aa10.12□□□□□ -0.79
PPP4R3A-212ENST00000557382 GRAMD1CQ8IYS0 662 aa10.12□□□□□ -0.79
PPP4R3A-212ENST00000557382 SLC44A5Q8NCS7 719 aa10.12□□□□□ -0.79
PPP4R3A-212ENST00000557382 ANKRD7Q92527 254 aa10.12□□□□□ -0.79
PPP4R3A-212ENST00000557382 GPKOWQ92917 476 aaPredicted RBP eCLIP10.12□□□□□ -0.79
PPP4R3A-212ENST00000557382 PPP1R13BQ96KQ4 1090 aa10.12□□□□□ -0.79
PPP4R3A-212ENST00000557382 GPR101Q96P66 508 aaPredicted RBP10.12□□□□□ -0.79
PPP4R3A-212ENST00000557382 ZC3H12CQ9C0D7 883 aaKnown RBP10.12□□□□□ -0.79
PPP4R3A-212ENST00000557382 TMX4Q9H1E5 349 aaPredicted RBP10.12□□□□□ -0.79
PPP4R3A-212ENST00000557382 INTS13Q9NVM9 706 aa10.12□□□□□ -0.79
PPP4R3A-212ENST00000557382 SEC63Q9UGP8 760 aaKnown RBP10.12□□□□□ -0.79
PPP4R3A-212ENST00000557382 RWDD2AQ9UIY3 292 aa10.12□□□□□ -0.79
PPP4R3A-212ENST00000557382 RGPD3A6NKT7 1758 aaPredicted RBP10.11□□□□□ -0.79
PPP4R3A-212ENST00000557382 RGPD4Q7Z3J3 1758 aa10.11□□□□□ -0.79
PPP4R3A-212ENST00000557382 ITIH6Q6UXX5 1313 aa10.11□□□□□ -0.79
PPP4R3A-212ENST00000557382 LRRC10BA6NIK2 292 aa10.11□□□□□ -0.79
PPP4R3A-212ENST00000557382 USP27XA6NNY8 438 aa10.11□□□□□ -0.79
PPP4R3A-212ENST00000557382 TRIM37O94972 964 aa10.11□□□□□ -0.79
PPP4R3A-212ENST00000557382 VEGFAP15692 232 aaPredicted RBP10.11□□□□□ -0.79
PPP4R3A-212ENST00000557382 STAT6P42226 847 aa10.11□□□□□ -0.79
PPP4R3A-212ENST00000557382 NAPAP54920 295 aa10.11□□□□□ -0.79
PPP4R3A-212ENST00000557382 GTF2IP78347 998 aa10.11□□□□□ -0.79
PPP4R3A-212ENST00000557382 HDLBPQ00341 1268 aaKnown RBP10.11□□□□□ -0.79
PPP4R3A-212ENST00000557382 NONOQ15233 471 aaKnown RBP eCLIP10.11□□□□□ -0.79
PPP4R3A-212ENST00000557382 TYW1BQ6NUM6 668 aa10.11□□□□□ -0.79
PPP4R3A-212ENST00000557382 HEATR3Q7Z4Q2 680 aa10.11□□□□□ -0.79
PPP4R3A-212ENST00000557382 ANKRD20A12PQ8NF67 263 aa10.11□□□□□ -0.79
PPP4R3A-212ENST00000557382 CCDC51Q96ER9 411 aa10.11□□□□□ -0.79
PPP4R3A-212ENST00000557382 CEP95Q96GE4 821 aa10.11□□□□□ -0.79
PPP4R3A-212ENST00000557382 MASTLQ96GX5 879 aa10.11□□□□□ -0.79
PPP4R3A-212ENST00000557382 CCDC17Q96LX7 622 aa10.11□□□□□ -0.79
PPP4R3A-212ENST00000557382 PANX2Q96RD6 677 aa10.11□□□□□ -0.79
PPP4R3A-212ENST00000557382 MED15Q96RN5 788 aa10.11□□□□□ -0.79
PPP4R3A-212ENST00000557382 NAA15Q9BXJ9 866 aaKnown RBP10.11□□□□□ -0.79
PPP4R3A-212ENST00000557382 EHD4Q9H223 541 aa10.11□□□□□ -0.79
PPP4R3A-212ENST00000557382 DISC1Q9NRI5 854 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms