RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 NCAPG2Q86XI2 1143 aa14.67□□□□□ -0.06
SLIRP-209ENST00000557342 RIOX2Q8IUF8 465 aa14.67□□□□□ -0.06
SLIRP-209ENST00000557342 ANKS1AQ92625 1134 aa14.67□□□□□ -0.06
SLIRP-209ENST00000557342 KAT14Q9H8E8 782 aa14.67□□□□□ -0.06
SLIRP-209ENST00000557342 MTMR7Q9Y216 660 aa14.67□□□□□ -0.06
SLIRP-209ENST00000557342 TNKSO95271 1327 aa14.66□□□□□ -0.06
SLIRP-209ENST00000557342 E7EWF7 191 aa14.66□□□□□ -0.06
SLIRP-209ENST00000557342 ATP2A1O14983 1001 aa14.66□□□□□ -0.06
SLIRP-209ENST00000557342 CYP2B6P20813 491 aa14.66□□□□□ -0.06
SLIRP-209ENST00000557342 OAZ1P54368 228 aa14.66□□□□□ -0.06
SLIRP-209ENST00000557342 MAP2K5Q13163 448 aa14.66□□□□□ -0.06
SLIRP-209ENST00000557342 RNF20Q5VTR2 975 aa14.66□□□□□ -0.06
SLIRP-209ENST00000557342 KCTD1Q719H9 257 aa14.66□□□□□ -0.06
SLIRP-209ENST00000557342 REPS2Q8NFH8 660 aa14.66□□□□□ -0.06
SLIRP-209ENST00000557342 NKX2-3Q8TAU0 364 aa14.66□□□□□ -0.06
SLIRP-209ENST00000557342 USP6NLQ92738 828 aa14.66□□□□□ -0.06
SLIRP-209ENST00000557342 APBA2Q99767 749 aa14.66□□□□□ -0.06
SLIRP-209ENST00000557342 TEX13BQ9BXU2 312 aa14.66□□□□□ -0.06
SLIRP-209ENST00000557342 SLC38A10Q9HBR0 1119 aa14.66□□□□□ -0.06
SLIRP-209ENST00000557342 ZNF214Q9UL59 606 aaPredicted RBP14.66□□□□□ -0.06
SLIRP-209ENST00000557342 MYH6P13533 1939 aa14.65□□□□□ -0.06
SLIRP-209ENST00000557342 ERICH2A1L162 156 aa14.65□□□□□ -0.06
SLIRP-209ENST00000557342 HMGCRP04035 888 aa14.65□□□□□ -0.06
SLIRP-209ENST00000557342 PDHBP11177 359 aa14.65□□□□□ -0.06
SLIRP-209ENST00000557342 ELNP15502 786 aa14.65□□□□□ -0.06
SLIRP-209ENST00000557342 SOX10P56693 466 aa14.65□□□□□ -0.06
SLIRP-209ENST00000557342 GRB14Q14449 540 aa14.65□□□□□ -0.06
SLIRP-209ENST00000557342 SART3Q15020 963 aaKnown RBP14.65□□□□□ -0.06
SLIRP-209ENST00000557342 NECTIN1Q15223 517 aa14.65□□□□□ -0.06
SLIRP-209ENST00000557342 IFIT1BQ5T764 474 aaKnown RBP14.65□□□□□ -0.06
SLIRP-209ENST00000557342 ABRAQ8N0Z2 381 aa14.65□□□□□ -0.06
SLIRP-209ENST00000557342 ENAHQ8N8S7 591 aaPredicted RBP14.65□□□□□ -0.06
SLIRP-209ENST00000557342 PNMA1Q8ND90 353 aa14.65□□□□□ -0.06
SLIRP-209ENST00000557342 CHMP4CQ96CF2 233 aa14.65□□□□□ -0.06
SLIRP-209ENST00000557342 SLC5A4Q9NY91 659 aa14.65□□□□□ -0.06
SLIRP-209ENST00000557342 SLC27A2O14975 620 aa14.64□□□□□ -0.07
SLIRP-209ENST00000557342 INHAP05111 366 aa14.64□□□□□ -0.07
SLIRP-209ENST00000557342 FCER1AP12319 257 aa14.64□□□□□ -0.07
SLIRP-209ENST00000557342 ZKSCAN1P17029 563 aaPredicted RBP14.64□□□□□ -0.07
SLIRP-209ENST00000557342 RGS19P49795 217 aa14.64□□□□□ -0.07
SLIRP-209ENST00000557342 CREB3L3Q68CJ9 461 aa14.64□□□□□ -0.07
SLIRP-209ENST00000557342 SNRNP48Q6IEG0 339 aaKnown RBP14.64□□□□□ -0.07
SLIRP-209ENST00000557342 BTNL9Q6UXG8 535 aa14.64□□□□□ -0.07
SLIRP-209ENST00000557342 CYB5R4Q7L1T6 521 aa14.64□□□□□ -0.07
SLIRP-209ENST00000557342 CPXCR1Q8N123 301 aa14.64□□□□□ -0.07
SLIRP-209ENST00000557342 HOXC6P09630 235 aa14.63□□□□□ -0.07
SLIRP-209ENST00000557342 SNHG28P0DPA3 235 aa14.63□□□□□ -0.07
SLIRP-209ENST00000557342 ZNF543Q08ER8 600 aa14.63□□□□□ -0.07
SLIRP-209ENST00000557342 GPATCH4Q5T3I0 446 aaKnown RBP14.63□□□□□ -0.07
SLIRP-209ENST00000557342 STOX1Q6ZVD7 989 aa14.63□□□□□ -0.07
SLIRP-209ENST00000557342 DPP9Q86TI2 863 aa14.63□□□□□ -0.07
SLIRP-209ENST00000557342 MMP19Q99542 508 aa14.63□□□□□ -0.07
SLIRP-209ENST00000557342 MTA3Q9BTC8 594 aa14.63□□□□□ -0.07
SLIRP-209ENST00000557342 RAVER2Q9HCJ3 691 aaKnown RBP14.63□□□□□ -0.07
SLIRP-209ENST00000557342 FBXO40Q9UH90 709 aa14.63□□□□□ -0.07
SLIRP-209ENST00000557342 PRR12Q9ULL5 1215 aa14.63□□□□□ -0.07
SLIRP-209ENST00000557342 FRMPD2Q68DX3 1309 aaPredicted RBP14.63□□□□□ -0.07
SLIRP-209ENST00000557342 IFIT3O14879 490 aaKnown RBP14.62□□□□□ -0.07
SLIRP-209ENST00000557342 REC8O95072 547 aa14.62□□□□□ -0.07
SLIRP-209ENST00000557342 MYCP01106 439 aaPredicted RBP14.62□□□□□ -0.07
SLIRP-209ENST00000557342 CCL5P13501 91 aa14.62□□□□□ -0.07
SLIRP-209ENST00000557342 CAPN2P17655 700 aa14.62□□□□□ -0.07
SLIRP-209ENST00000557342 ADORA2AP29274 412 aa14.62□□□□□ -0.07
SLIRP-209ENST00000557342 KCTD2Q14681 263 aa14.62□□□□□ -0.07
SLIRP-209ENST00000557342 MTFR1Q15390 333 aa14.62□□□□□ -0.07
SLIRP-209ENST00000557342 SEC23AQ15436 765 aa14.62□□□□□ -0.07
SLIRP-209ENST00000557342 TKFCQ3LXA3 575 aa14.62□□□□□ -0.07
SLIRP-209ENST00000557342 SYDE2Q5VT97 1194 aa14.62□□□□□ -0.07
SLIRP-209ENST00000557342 RASGRP2Q7LDG7 609 aa14.62□□□□□ -0.07
SLIRP-209ENST00000557342 CHST13Q8NET6 341 aa14.62□□□□□ -0.07
SLIRP-209ENST00000557342 TRIB2Q92519 343 aa14.62□□□□□ -0.07
SLIRP-209ENST00000557342 RNF208Q9H0X6 261 aa14.62□□□□□ -0.07
SLIRP-209ENST00000557342 GPCPD1Q9NPB8 672 aa14.62□□□□□ -0.07
SLIRP-209ENST00000557342 PNMA2Q9UL42 364 aa14.62□□□□□ -0.07
SLIRP-209ENST00000557342 TAF6LQ9Y6J9 622 aa14.62□□□□□ -0.07
SLIRP-209ENST00000557342 PARP1P09874 1014 aaKnown RBP14.61□□□□□ -0.07
SLIRP-209ENST00000557342 MCM5P33992 734 aa14.61□□□□□ -0.07
SLIRP-209ENST00000557342 SLC4A3P48751 1232 aa14.61□□□□□ -0.07
SLIRP-209ENST00000557342 WTAPQ15007 396 aa14.61□□□□□ -0.07
SLIRP-209ENST00000557342 ASPRV1Q53RT3 343 aa14.61□□□□□ -0.07
SLIRP-209ENST00000557342 TTBK2Q6IQ55 1244 aa14.61□□□□□ -0.07
SLIRP-209ENST00000557342 MB21D2Q8IYB1 491 aaPredicted RBP14.61□□□□□ -0.07
SLIRP-209ENST00000557342 RANBP17Q9H2T7 1088 aaKnown RBP14.61□□□□□ -0.07
SLIRP-209ENST00000557342 RIPK3Q9Y572 518 aa14.61□□□□□ -0.07
SLIRP-209ENST00000557342 RPTORQ8N122 1335 aa14.61□□□□□ -0.07
SLIRP-209ENST00000557342 POTEFA5A3E0 1075 aa14.6□□□□□ -0.07
SLIRP-209ENST00000557342 GJB1P08034 283 aa14.6□□□□□ -0.07
SLIRP-209ENST00000557342 SLC16A2P36021 539 aa14.6□□□□□ -0.07
SLIRP-209ENST00000557342 KRT32Q14532 448 aa14.6□□□□□ -0.07
SLIRP-209ENST00000557342 TMEM67Q5HYA8 995 aa14.6□□□□□ -0.07
SLIRP-209ENST00000557342 MFSD14CQ5VZR4 134 aa14.6□□□□□ -0.07
SLIRP-209ENST00000557342 OLFML2BQ68BL8 750 aa14.6□□□□□ -0.07
SLIRP-209ENST00000557342 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.6□□□□□ -0.07
SLIRP-209ENST00000557342 NPLOC4Q8TAT6 608 aa14.6□□□□□ -0.07
SLIRP-209ENST00000557342 TMEM87BQ96K49 555 aa14.6□□□□□ -0.07
SLIRP-209ENST00000557342 UNC93B1Q9H1C4 597 aa14.6□□□□□ -0.07
SLIRP-209ENST00000557342 HMX1Q9NP08 348 aaPredicted RBP14.6□□□□□ -0.07
SLIRP-209ENST00000557342 DIS3Q9Y2L1 958 aaKnown RBP14.6□□□□□ -0.07
SLIRP-209ENST00000557342 ZNF536O15090 1300 aa14.6□□□□□ -0.07
SLIRP-209ENST00000557342 SMCHD1A6NHR9 2005 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms