RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-231	ENST00000557336	NCAPG2	Q86XI2	1143 aa		13.41	□□□□□ -0.26
HNRNPC-231	ENST00000557336	RIOX2	Q8IUF8	465 aa		13.41	□□□□□ -0.26
HNRNPC-231	ENST00000557336	KBTBD3	Q8NAB2	608 aa		13.41	□□□□□ -0.26
HNRNPC-231	ENST00000557336	BBX	Q8WY36	941 aa	Predicted RBP	13.41	□□□□□ -0.26
HNRNPC-231	ENST00000557336	CHMP4B	Q9H444	224 aa	Known RBP	13.41	□□□□□ -0.26
HNRNPC-231	ENST00000557336	GREB1L	Q9C091	1923 aa	Predicted RBP	13.41	□□□□□ -0.26
HNRNPC-231	ENST00000557336	VCAN	P13611	3396 aa		13.4	□□□□□ -0.26
HNRNPC-231	ENST00000557336	IGKV6D-41	A0A0C4DH26	115 aa		13.4	□□□□□ -0.26
HNRNPC-231	ENST00000557336	PGK2	P07205	417 aa		13.4	□□□□□ -0.26
HNRNPC-231	ENST00000557336	TAL1	P17542	331 aa	Predicted RBP	13.4	□□□□□ -0.26
HNRNPC-231	ENST00000557336	ZNF792	Q3KQV3	632 aa		13.4	□□□□□ -0.26
HNRNPC-231	ENST00000557336	FAM83B	Q5T0W9	1011 aa		13.4	□□□□□ -0.26
HNRNPC-231	ENST00000557336	ZSCAN25	Q6NSZ9	544 aa		13.4	□□□□□ -0.26
HNRNPC-231	ENST00000557336	NUP88	Q99567	741 aa	Predicted RBP	13.4	□□□□□ -0.26
HNRNPC-231	ENST00000557336	SH2D4A	Q9H788	454 aa		13.4	□□□□□ -0.26
HNRNPC-231	ENST00000557336	PPP1R9A	Q9ULJ8	1098 aa		13.4	□□□□□ -0.26
HNRNPC-231	ENST00000557336	ROBO3	Q96MS0	1386 aa		13.4	□□□□□ -0.26
HNRNPC-231	ENST00000557336		M0R2C6	588 aa		13.39	□□□□□ -0.27
HNRNPC-231	ENST00000557336	FCER1A	P12319	257 aa		13.39	□□□□□ -0.27
HNRNPC-231	ENST00000557336	RTP1	P59025	263 aa		13.39	□□□□□ -0.27
HNRNPC-231	ENST00000557336	SNX17	Q15036	470 aa		13.39	□□□□□ -0.27
HNRNPC-231	ENST00000557336	LRRC41	Q15345	812 aa		13.39	□□□□□ -0.27
HNRNPC-231	ENST00000557336	FAM47A	Q5JRC9	791 aa		13.39	□□□□□ -0.27
HNRNPC-231	ENST00000557336	GIMAP6	Q6P9H5	292 aa		13.39	□□□□□ -0.27
HNRNPC-231	ENST00000557336	TMEM92	Q6UXU6	159 aa		13.39	□□□□□ -0.27
HNRNPC-231	ENST00000557336	SLC39A5	Q6ZMH5	540 aa		13.39	□□□□□ -0.27
HNRNPC-231	ENST00000557336	STK11IP	Q8N1F8	1099 aa		13.39	□□□□□ -0.27
HNRNPC-231	ENST00000557336	DEFB123	Q8N688	67 aa		13.39	□□□□□ -0.27
HNRNPC-231	ENST00000557336	OTUD7A	Q8TE49	926 aa	Predicted RBP	13.39	□□□□□ -0.27
HNRNPC-231	ENST00000557336	APPBP2	Q92624	585 aa		13.39	□□□□□ -0.27
HNRNPC-231	ENST00000557336	MTMR10	Q9NXD2	777 aa		13.39	□□□□□ -0.27
HNRNPC-231	ENST00000557336	ARPP21	Q9UBL0	812 aa	Predicted RBP	13.39	□□□□□ -0.27
HNRNPC-231	ENST00000557336	RIPK3	Q9Y572	518 aa		13.39	□□□□□ -0.27
HNRNPC-231	ENST00000557336	PCDHB15	Q9Y5E8	787 aa		13.39	□□□□□ -0.27
HNRNPC-231	ENST00000557336	MYH7	P12883	1935 aa		13.39	□□□□□ -0.27
HNRNPC-231	ENST00000557336		F5H6K3	240 aa		13.38	□□□□□ -0.27
HNRNPC-231	ENST00000557336	RNF113A	O15541	343 aa	Known RBP	13.38	□□□□□ -0.27
HNRNPC-231	ENST00000557336	GPAA1	O43292	621 aa		13.38	□□□□□ -0.27
HNRNPC-231	ENST00000557336	SLC25A27	O95847	323 aa		13.38	□□□□□ -0.27
HNRNPC-231	ENST00000557336	NDUFB10	O96000	172 aa		13.38	□□□□□ -0.27
HNRNPC-231	ENST00000557336	STAT3	P40763	770 aa		13.38	□□□□□ -0.27
HNRNPC-231	ENST00000557336	ADCYAP1R1	P41586	468 aa		13.38	□□□□□ -0.27
HNRNPC-231	ENST00000557336	KLRC3	Q07444	240 aa		13.38	□□□□□ -0.27
HNRNPC-231	ENST00000557336	ARRDC4	Q8NCT1	418 aa		13.38	□□□□□ -0.27
HNRNPC-231	ENST00000557336	PI4K2B	Q8TCG2	481 aa		13.38	□□□□□ -0.27
HNRNPC-231	ENST00000557336	SEC62	Q99442	399 aa	Known RBP	13.38	□□□□□ -0.27
HNRNPC-231	ENST00000557336	SCUBE2	Q9NQ36	999 aa		13.38	□□□□□ -0.27
HNRNPC-231	ENST00000557336	NYAP2	Q9P242	653 aa		13.38	□□□□□ -0.27
HNRNPC-231	ENST00000557336	SMCHD1	A6NHR9	2005 aa		13.38	□□□□□ -0.27
HNRNPC-231	ENST00000557336	COL11A1	P12107	1806 aa	Predicted RBP	13.38	□□□□□ -0.27
HNRNPC-231	ENST00000557336	MYH8	P13535	1937 aa		13.37	□□□□□ -0.27
HNRNPC-231	ENST00000557336	MINDY4B	A8MYZ0	360 aa		13.37	□□□□□ -0.27
HNRNPC-231	ENST00000557336	FOXP2	O15409	715 aa		13.37	□□□□□ -0.27
HNRNPC-231	ENST00000557336	ZNF865	P0CJ78	1059 aa	Predicted RBP	13.37	□□□□□ -0.27
HNRNPC-231	ENST00000557336	MAMSTR	Q6ZN01	415 aa		13.37	□□□□□ -0.27
HNRNPC-231	ENST00000557336	SH3RF1	Q7Z6J0	888 aa		13.37	□□□□□ -0.27
HNRNPC-231	ENST00000557336	AMOTL1	Q8IY63	956 aa		13.37	□□□□□ -0.27
HNRNPC-231	ENST00000557336	MKL1	Q969V6	931 aa		13.37	□□□□□ -0.27
HNRNPC-231	ENST00000557336	FERMT2	Q96AC1	680 aa		13.37	□□□□□ -0.27
HNRNPC-231	ENST00000557336	DDRGK1	Q96HY6	314 aa		13.37	□□□□□ -0.27
HNRNPC-231	ENST00000557336	MMP19	Q99542	508 aa		13.37	□□□□□ -0.27
HNRNPC-231	ENST00000557336	TINF2	Q9BSI4	451 aa		13.37	□□□□□ -0.27
HNRNPC-231	ENST00000557336	GOPC	Q9HD26	462 aa		13.37	□□□□□ -0.27
HNRNPC-231	ENST00000557336	ATP11B	Q9Y2G3	1177 aa		13.37	□□□□□ -0.27
HNRNPC-231	ENST00000557336	DIS3	Q9Y2L1	958 aa	Known RBP	13.37	□□□□□ -0.27
HNRNPC-231	ENST00000557336	ZNFX1	Q9P2E3	1918 aa	Known RBP	13.37	□□□□□ -0.27
HNRNPC-231	ENST00000557336	DNAJC25-GNG10	A0A024R161	153 aa		13.36	□□□□□ -0.27
HNRNPC-231	ENST00000557336	TRIM43B	A6NCK2	446 aa		13.36	□□□□□ -0.27
HNRNPC-231	ENST00000557336	PRDM1	O75626	825 aa		13.36	□□□□□ -0.27
HNRNPC-231	ENST00000557336	ITGB8	P26012	769 aa		13.36	□□□□□ -0.27
HNRNPC-231	ENST00000557336	TRIM60	Q495X7	471 aa		13.36	□□□□□ -0.27
HNRNPC-231	ENST00000557336	C1orf53	Q5VUE5	145 aa		13.36	□□□□□ -0.27
HNRNPC-231	ENST00000557336	TRIM43	Q96BQ3	446 aa	Predicted RBP	13.36	□□□□□ -0.27
HNRNPC-231	ENST00000557336	LENG1	Q96BZ8	264 aa	Predicted RBP	13.36	□□□□□ -0.27
HNRNPC-231	ENST00000557336	FGD4	Q96M96	766 aa		13.36	□□□□□ -0.27
HNRNPC-231	ENST00000557336	SLC5A4	Q9NY91	659 aa		13.36	□□□□□ -0.27
HNRNPC-231	ENST00000557336	CLIP2	Q9UDT6	1046 aa		13.36	□□□□□ -0.27
HNRNPC-231	ENST00000557336	NRBP1	Q9UHY1	535 aa		13.36	□□□□□ -0.27
HNRNPC-231	ENST00000557336	PHF24	Q9UPV7	400 aa		13.36	□□□□□ -0.27
HNRNPC-231	ENST00000557336	LTBP2	Q14767	1821 aa		13.35	□□□□□ -0.27
HNRNPC-231	ENST00000557336	SPTBN5	Q9NRC6	3674 aa	Known RBP	13.35	□□□□□ -0.27
HNRNPC-231	ENST00000557336	PATL2	C9JE40	543 aa	Known RBP	13.35	□□□□□ -0.27
HNRNPC-231	ENST00000557336	KBTBD13	C9JR72	458 aa		13.35	□□□□□ -0.27
HNRNPC-231	ENST00000557336	ATP2A1	O14983	1001 aa		13.35	□□□□□ -0.27
HNRNPC-231	ENST00000557336	SNAI1	O95863	264 aa	Predicted RBP	13.35	□□□□□ -0.27
HNRNPC-231	ENST00000557336	PGK1	P00558	417 aa		13.35	□□□□□ -0.27
HNRNPC-231	ENST00000557336	KCTD2	Q14681	263 aa		13.35	□□□□□ -0.27
HNRNPC-231	ENST00000557336	C9orf50	Q5SZB4	431 aa		13.35	□□□□□ -0.27
HNRNPC-231	ENST00000557336	IFNL3	Q8IZI9	196 aa		13.35	□□□□□ -0.27
HNRNPC-231	ENST00000557336	SLC17A8	Q8NDX2	589 aa		13.35	□□□□□ -0.27
HNRNPC-231	ENST00000557336	CEP95	Q96GE4	821 aa		13.35	□□□□□ -0.27
HNRNPC-231	ENST00000557336	SLF1	Q9BQI6	1058 aa		13.35	□□□□□ -0.27
HNRNPC-231	ENST00000557336	MKNK2	Q9HBH9	465 aa		13.35	□□□□□ -0.27
HNRNPC-231	ENST00000557336	PDLIM7	Q9NR12	457 aa		13.35	□□□□□ -0.27
HNRNPC-231	ENST00000557336	MTMR4	Q9NYA4	1195 aa		13.35	□□□□□ -0.27
HNRNPC-231	ENST00000557336	STXBP5L	Q9Y2K9	1186 aa		13.35	□□□□□ -0.27
HNRNPC-231	ENST00000557336	TACC3	Q9Y6A5	838 aa		13.35	□□□□□ -0.27
HNRNPC-231	ENST00000557336	CHD9	Q3L8U1	2897 aa		13.35	□□□□□ -0.27
HNRNPC-231	ENST00000557336	SALL3	Q9BXA9	1300 aa		13.35	□□□□□ -0.27
HNRNPC-231	ENST00000557336	RAD21	O60216	631 aa		13.34	□□□□□ -0.27

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