RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 ADCY8P40145 1251 aa9.63□□□□□ -0.87
SYNE3-205ENST00000557275 TNNI2P48788 182 aa9.63□□□□□ -0.87
SYNE3-205ENST00000557275 TRPC1P48995 793 aa9.63□□□□□ -0.87
SYNE3-205ENST00000557275 RARSP54136 660 aaKnown RBP9.63□□□□□ -0.87
SYNE3-205ENST00000557275 PRDM1O75626 825 aa9.63□□□□□ -0.87
SYNE3-205ENST00000557275 ATF2P15336 505 aa9.63□□□□□ -0.87
SYNE3-205ENST00000557275 ART3Q13508 389 aa9.63□□□□□ -0.87
SYNE3-205ENST00000557275 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.63□□□□□ -0.87
SYNE3-205ENST00000557275 KIF14Q15058 1648 aa9.63□□□□□ -0.87
SYNE3-205ENST00000557275 H7C0S8 307 aa9.63□□□□□ -0.87
SYNE3-205ENST00000557275 NAF1Q96HR8 494 aaKnown RBP9.63□□□□□ -0.87
SYNE3-205ENST00000557275 CUL7Q14999 1698 aa9.63□□□□□ -0.87
SYNE3-205ENST00000557275 ST13P5Q8NFI4 369 aaPredicted RBP9.63□□□□□ -0.87
SYNE3-205ENST00000557275 MBD2Q9UBB5 411 aa9.63□□□□□ -0.87
SYNE3-205ENST00000557275 SEPT3Q9UH03 358 aa9.63□□□□□ -0.87
SYNE3-205ENST00000557275 CTNND2Q9UQB3 1225 aa9.63□□□□□ -0.87
SYNE3-205ENST00000557275 DHX9Q08211 1270 aaKnown RBP9.63□□□□□ -0.87
SYNE3-205ENST00000557275 DACH2Q96NX9 599 aa9.63□□□□□ -0.87
SYNE3-205ENST00000557275 INTS9Q9NV88 658 aaKnown RBP9.63□□□□□ -0.87
SYNE3-205ENST00000557275 H3BRJ5 948 aa9.63□□□□□ -0.87
SYNE3-205ENST00000557275 GNGT1P63211 74 aa9.63□□□□□ -0.87
SYNE3-205ENST00000557275 BASP1P80723 227 aaKnown RBP9.63□□□□□ -0.87
SYNE3-205ENST00000557275 TRIM59Q8IWR1 403 aa9.63□□□□□ -0.87
SYNE3-205ENST00000557275 C9orf84Q5VXU9 1444 aa9.63□□□□□ -0.87
SYNE3-205ENST00000557275 KRIT1O00522 736 aa9.63□□□□□ -0.87
SYNE3-205ENST00000557275 CEP85Q6P2H3 762 aa9.63□□□□□ -0.87
SYNE3-205ENST00000557275 HDDC2Q7Z4H3 204 aa9.63□□□□□ -0.87
SYNE3-205ENST00000557275 SCYL1Q96KG9 808 aa9.63□□□□□ -0.87
SYNE3-205ENST00000557275 SH3GL2Q99962 352 aa9.63□□□□□ -0.87
SYNE3-205ENST00000557275 VAT1LQ9HCJ6 419 aa9.63□□□□□ -0.87
SYNE3-205ENST00000557275 EPHB4P54760 987 aa9.63□□□□□ -0.87
SYNE3-205ENST00000557275 SUN2Q9UH99 717 aa9.63□□□□□ -0.87
SYNE3-205ENST00000557275 CCDC151A5D8V7 595 aa9.62□□□□□ -0.87
SYNE3-205ENST00000557275 S100A5P33763 92 aa9.62□□□□□ -0.87
SYNE3-205ENST00000557275 CDK19Q9BWU1 502 aa9.62□□□□□ -0.87
SYNE3-205ENST00000557275 BAZ2BQ9UIF8 2168 aaKnown RBP9.62□□□□□ -0.87
SYNE3-205ENST00000557275 IBTKQ9P2D0 1353 aaPredicted RBP9.62□□□□□ -0.87
SYNE3-205ENST00000557275 ARHGEF37A1IGU5 675 aa9.62□□□□□ -0.87
SYNE3-205ENST00000557275 SPAG7O75391 227 aa9.62□□□□□ -0.87
SYNE3-205ENST00000557275 DAB1O75553 588 aa9.62□□□□□ -0.87
SYNE3-205ENST00000557275 CARSP49589 748 aaKnown RBP9.62□□□□□ -0.87
SYNE3-205ENST00000557275 FSCBQ5H9T9 825 aa9.62□□□□□ -0.87
SYNE3-205ENST00000557275 ZNF233A6NK53 670 aa9.62□□□□□ -0.87
SYNE3-205ENST00000557275 MARCKSP29966 332 aaPredicted RBP9.62□□□□□ -0.87
SYNE3-205ENST00000557275 ST13P50502 369 aaKnown RBP9.62□□□□□ -0.87
SYNE3-205ENST00000557275 HORMAD1Q86X24 394 aa9.62□□□□□ -0.87
SYNE3-205ENST00000557275 ASPSCR1Q9BZE9 553 aa9.62□□□□□ -0.87
SYNE3-205ENST00000557275 NYXQ9GZU5 481 aa9.62□□□□□ -0.87
SYNE3-205ENST00000557275 LDHAL6AQ6ZMR3 332 aa9.62□□□□□ -0.87
SYNE3-205ENST00000557275 CYTH1Q15438 398 aa9.62□□□□□ -0.87
SYNE3-205ENST00000557275 KLHL29Q96CT2 875 aa9.62□□□□□ -0.87
SYNE3-205ENST00000557275 TUBGCP3Q96CW5 907 aa9.62□□□□□ -0.87
SYNE3-205ENST00000557275 CUTAO60888 179 aa9.62□□□□□ -0.87
SYNE3-205ENST00000557275 MAPK13O15264 365 aa9.62□□□□□ -0.87
SYNE3-205ENST00000557275 PARP1P09874 1014 aaKnown RBP9.62□□□□□ -0.87
SYNE3-205ENST00000557275 EXOC4Q96A65 974 aa9.62□□□□□ -0.87
SYNE3-205ENST00000557275 CEP55Q53EZ4 464 aa9.62□□□□□ -0.87
SYNE3-205ENST00000557275 KRT16P08779 473 aa9.62□□□□□ -0.87
SYNE3-205ENST00000557275 MRFAP1Q9Y605 127 aa9.62□□□□□ -0.87
SYNE3-205ENST00000557275 NVLO15381 856 aaKnown RBP9.62□□□□□ -0.87
SYNE3-205ENST00000557275 PRIM1P49642 420 aaKnown RBP9.62□□□□□ -0.87
SYNE3-205ENST00000557275 CHGBP05060 677 aa9.62□□□□□ -0.87
SYNE3-205ENST00000557275 AOC3Q16853 763 aa9.62□□□□□ -0.87
SYNE3-205ENST00000557275 RARS2Q5T160 578 aaKnown RBP9.62□□□□□ -0.87
SYNE3-205ENST00000557275 PRAM1Q96QH2 718 aa9.62□□□□□ -0.87
SYNE3-205ENST00000557275 HAUS4Q9H6D7 363 aa9.62□□□□□ -0.87
SYNE3-205ENST00000557275 GDPD2Q9HCC8 539 aa9.62□□□□□ -0.87
SYNE3-205ENST00000557275 LONRF2Q1L5Z9 754 aa9.61□□□□□ -0.87
SYNE3-205ENST00000557275 TADA1Q96BN2 335 aa9.61□□□□□ -0.87
SYNE3-205ENST00000557275 TMEM191CA6NGB0 347 aa9.61□□□□□ -0.87
SYNE3-205ENST00000557275 TMEM191BP0C7N4 346 aa9.61□□□□□ -0.87
SYNE3-205ENST00000557275 DNM1Q05193 864 aaKnown RBP9.61□□□□□ -0.87
SYNE3-205ENST00000557275 GJC2Q5T442 439 aaPredicted RBP9.61□□□□□ -0.87
SYNE3-205ENST00000557275 TNNQ9UQP3 1299 aa9.61□□□□□ -0.87
SYNE3-205ENST00000557275 ARHGEF35A5YM69 484 aa9.61□□□□□ -0.87
SYNE3-205ENST00000557275 RASSF9O75901 435 aa9.61□□□□□ -0.87
SYNE3-205ENST00000557275 IL15P40933 162 aaPredicted RBP9.61□□□□□ -0.87
SYNE3-205ENST00000557275 IRX1P78414 480 aaPredicted RBP9.61□□□□□ -0.87
SYNE3-205ENST00000557275 NR5A1Q13285 461 aa9.61□□□□□ -0.87
SYNE3-205ENST00000557275 SNX29Q8TEQ0 813 aa9.61□□□□□ -0.87
SYNE3-205ENST00000557275 ZFYVE1Q9HBF4 777 aa9.61□□□□□ -0.87
SYNE3-205ENST00000557275 CAPRIN1Q14444 709 aaKnown RBP9.61□□□□□ -0.87
SYNE3-205ENST00000557275 NUTM2GQ5VZR2 741 aa9.61□□□□□ -0.87
SYNE3-205ENST00000557275 EEF1GP26641 437 aaKnown RBP9.61□□□□□ -0.87
SYNE3-205ENST00000557275 TFAP4Q01664 338 aa9.61□□□□□ -0.87
SYNE3-205ENST00000557275 NBPF14Q5TI25 921 aa9.61□□□□□ -0.87
SYNE3-205ENST00000557275 BZW1Q7L1Q6 419 aaKnown RBP9.61□□□□□ -0.87
SYNE3-205ENST00000557275 BRF1Q92994 677 aa9.61□□□□□ -0.87
SYNE3-205ENST00000557275 EPAS1Q99814 870 aa9.61□□□□□ -0.87
SYNE3-205ENST00000557275 DHX32Q7L7V1 743 aaKnown RBP9.61□□□□□ -0.87
SYNE3-205ENST00000557275 NCAPG2Q86XI2 1143 aa9.61□□□□□ -0.87
SYNE3-205ENST00000557275 OLFML3Q9NRN5 406 aa9.61□□□□□ -0.87
SYNE3-205ENST00000557275 KIF17Q9P2E2 1029 aa9.61□□□□□ -0.87
SYNE3-205ENST00000557275 TRPC5Q9UL62 973 aaPredicted RBP9.61□□□□□ -0.87
SYNE3-205ENST00000557275 ANKRD36BQ8N2N9 1353 aa9.61□□□□□ -0.87
SYNE3-205ENST00000557275 AP2B1P63010 937 aa9.61□□□□□ -0.87
SYNE3-205ENST00000557275 Q6ZUG5 572 aa9.61□□□□□ -0.87
SYNE3-205ENST00000557275 GPHNQ9NQX3 736 aaPredicted RBP9.61□□□□□ -0.87
SYNE3-205ENST00000557275 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.61□□□□□ -0.87
SYNE3-205ENST00000557275 KDM2BQ8NHM5 1336 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms