RNA–Protein interactions for RNA: ENST00000557201.5

HNRNPC-230, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-230ENST00000557201 ADAMTS4O75173 837 aa12.83□□□□□ -0.36
HNRNPC-230ENST00000557201 RARBP10826 455 aa12.83□□□□□ -0.36
HNRNPC-230ENST00000557201 ITGB8P26012 769 aa12.83□□□□□ -0.36
HNRNPC-230ENST00000557201 COPB2P35606 906 aa12.83□□□□□ -0.36
HNRNPC-230ENST00000557201 TLE2Q04725 743 aa12.83□□□□□ -0.36
HNRNPC-230ENST00000557201 KCTD2Q14681 263 aa12.83□□□□□ -0.36
HNRNPC-230ENST00000557201 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.83□□□□□ -0.36
HNRNPC-230ENST00000557201 KBTBD3Q8NAB2 608 aa12.83□□□□□ -0.36
HNRNPC-230ENST00000557201 ECHDC1Q9NTX5 307 aa12.83□□□□□ -0.36
HNRNPC-230ENST00000557201 SMCHD1A6NHR9 2005 aa12.83□□□□□ -0.36
HNRNPC-230ENST00000557201 F5H6K3 240 aa12.82□□□□□ -0.36
HNRNPC-230ENST00000557201 ATP2A1O14983 1001 aa12.82□□□□□ -0.36
HNRNPC-230ENST00000557201 NDUFB10O96000 172 aa12.82□□□□□ -0.36
HNRNPC-230ENST00000557201 PGK1P00558 417 aa12.82□□□□□ -0.36
HNRNPC-230ENST00000557201 NEFLP07196 543 aa12.82□□□□□ -0.36
HNRNPC-230ENST00000557201 KLRC3Q07444 240 aa12.82□□□□□ -0.36
HNRNPC-230ENST00000557201 MAMDC4Q6UXC1 1216 aa12.82□□□□□ -0.36
HNRNPC-230ENST00000557201 MSL3Q8N5Y2 521 aaKnown RBP12.82□□□□□ -0.36
HNRNPC-230ENST00000557201 NUP88Q99567 741 aaPredicted RBP12.82□□□□□ -0.36
HNRNPC-230ENST00000557201 SLF1Q9BQI6 1058 aa12.82□□□□□ -0.36
HNRNPC-230ENST00000557201 DCTPP1Q9H773 170 aa12.82□□□□□ -0.36
HNRNPC-230ENST00000557201 EPB41L4AQ9HCS5 686 aaPredicted RBP12.82□□□□□ -0.36
HNRNPC-230ENST00000557201 PRDM5Q9NQX1 630 aaPredicted RBP12.82□□□□□ -0.36
HNRNPC-230ENST00000557201 RIPK3Q9Y572 518 aa12.82□□□□□ -0.36
HNRNPC-230ENST00000557201 PLXNA1Q9UIW2 1896 aa12.82□□□□□ -0.36
HNRNPC-230ENST00000557201 SNAI1O95863 264 aaPredicted RBP12.81□□□□□ -0.36
HNRNPC-230ENST00000557201 ERICH6BQ5W0A0 696 aa12.81□□□□□ -0.36
HNRNPC-230ENST00000557201 CCSAPQ6IQ19 270 aaPredicted RBP12.81□□□□□ -0.36
HNRNPC-230ENST00000557201 RNF180Q86T96 592 aa12.81□□□□□ -0.36
HNRNPC-230ENST00000557201 KLHDC9Q8NEP7 349 aa12.81□□□□□ -0.36
HNRNPC-230ENST00000557201 APPBP2Q92624 585 aa12.81□□□□□ -0.36
HNRNPC-230ENST00000557201 MKL1Q969V6 931 aa12.81□□□□□ -0.36
HNRNPC-230ENST00000557201 LENG1Q96BZ8 264 aaPredicted RBP12.81□□□□□ -0.36
HNRNPC-230ENST00000557201 TEX13BQ9BXU2 312 aa12.81□□□□□ -0.36
HNRNPC-230ENST00000557201 RWDD1Q9H446 243 aaPredicted RBP12.81□□□□□ -0.36
HNRNPC-230ENST00000557201 TACC3Q9Y6A5 838 aa12.81□□□□□ -0.36
HNRNPC-230ENST00000557201 A0A1W2PQ45 241 aaPredicted RBP12.81□□□□□ -0.36
HNRNPC-230ENST00000557201 A0A1W2PQY0 241 aa12.81□□□□□ -0.36
HNRNPC-230ENST00000557201 KIAA0355O15063 1070 aa12.81□□□□□ -0.36
HNRNPC-230ENST00000557201 RNF113AO15541 343 aaKnown RBP12.81□□□□□ -0.36
HNRNPC-230ENST00000557201 AKR1A1P14550 325 aa12.81□□□□□ -0.36
HNRNPC-230ENST00000557201 EPHB4P54760 987 aa12.81□□□□□ -0.36
HNRNPC-230ENST00000557201 SMAD3P84022 425 aaKnown RBP12.81□□□□□ -0.36
HNRNPC-230ENST00000557201 ZNF697Q5TEC3 545 aa12.81□□□□□ -0.36
HNRNPC-230ENST00000557201 ANKRD33Q7Z3H0 272 aa12.81□□□□□ -0.36
HNRNPC-230ENST00000557201 PRPF38AQ8NAV1 312 aaKnown RBP12.81□□□□□ -0.36
HNRNPC-230ENST00000557201 FGD4Q96M96 766 aa12.81□□□□□ -0.36
HNRNPC-230ENST00000557201 FAM161BQ96MY7 647 aa12.81□□□□□ -0.36
HNRNPC-230ENST00000557201 TSEN34Q9BSV6 310 aaKnown RBP12.81□□□□□ -0.36
HNRNPC-230ENST00000557201 SEMA6BQ9H3T3 888 aa12.81□□□□□ -0.36
HNRNPC-230ENST00000557201 SYNGAP1Q96PV0 1343 aa12.8□□□□□ -0.36
HNRNPC-230ENST00000557201 GPAA1O43292 621 aa12.8□□□□□ -0.36
HNRNPC-230ENST00000557201 CLTBP09497 229 aa12.8□□□□□ -0.36
HNRNPC-230ENST00000557201 TSHZ3Q63HK5 1081 aa12.8□□□□□ -0.36
HNRNPC-230ENST00000557201 SNRNP48Q6IEG0 339 aaKnown RBP12.8□□□□□ -0.36
HNRNPC-230ENST00000557201 ZNF467Q7Z7K2 595 aaPredicted RBP12.8□□□□□ -0.36
HNRNPC-230ENST00000557201 TOX2Q96NM4 488 aa12.8□□□□□ -0.36
HNRNPC-230ENST00000557201 CDX2Q99626 313 aaPredicted RBP12.8□□□□□ -0.36
HNRNPC-230ENST00000557201 COL25A1Q9BXS0 654 aaPredicted RBP12.8□□□□□ -0.36
HNRNPC-230ENST00000557201 TTYH1Q9H313 450 aaPredicted RBP12.8□□□□□ -0.36
HNRNPC-230ENST00000557201 MKNK2Q9HBH9 465 aa12.8□□□□□ -0.36
HNRNPC-230ENST00000557201 SLC38A10Q9HBR0 1119 aa12.8□□□□□ -0.36
HNRNPC-230ENST00000557201 SYNPO2Q9UMS6 1093 aa12.8□□□□□ -0.36
HNRNPC-230ENST00000557201 CNPY2Q9Y2B0 182 aa12.8□□□□□ -0.36
HNRNPC-230ENST00000557201 VCANP13611 3396 aa12.79□□□□□ -0.36
HNRNPC-230ENST00000557201 MINDY4BA8MYZ0 360 aa12.79□□□□□ -0.36
HNRNPC-230ENST00000557201 M0R2C6 588 aa12.79□□□□□ -0.36
HNRNPC-230ENST00000557201 ADCY6O43306 1168 aa12.79□□□□□ -0.36
HNRNPC-230ENST00000557201 RAD21O60216 631 aa12.79□□□□□ -0.36
HNRNPC-230ENST00000557201 ZFYP08048 801 aaPredicted RBP12.79□□□□□ -0.36
HNRNPC-230ENST00000557201 ACLYP53396 1101 aa12.79□□□□□ -0.36
HNRNPC-230ENST00000557201 FAAP100Q0VG06 881 aa12.79□□□□□ -0.36
HNRNPC-230ENST00000557201 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.79□□□□□ -0.36
HNRNPC-230ENST00000557201 STK11IPQ8N1F8 1099 aa12.79□□□□□ -0.36
HNRNPC-230ENST00000557201 CEP95Q96GE4 821 aa12.79□□□□□ -0.36
HNRNPC-230ENST00000557201 MTMR4Q9NYA4 1195 aa12.79□□□□□ -0.36
HNRNPC-230ENST00000557201 CLIP2Q9UDT6 1046 aa12.79□□□□□ -0.36
HNRNPC-230ENST00000557201 SYNRGQ9UMZ2 1314 aa12.79□□□□□ -0.36
HNRNPC-230ENST00000557201 PLIN4Q96Q06 1357 aa12.79□□□□□ -0.36
HNRNPC-230ENST00000557201 MYADML2A6NDP7 307 aa12.78□□□□□ -0.36
HNRNPC-230ENST00000557201 MOXD2PA6NHM9 499 aa12.78□□□□□ -0.36
HNRNPC-230ENST00000557201 PATL2C9JE40 543 aaKnown RBP12.78□□□□□ -0.36
HNRNPC-230ENST00000557201 DUSP11O75319 330 aaKnown RBP12.78□□□□□ -0.36
HNRNPC-230ENST00000557201 PRDM1O75626 825 aa12.78□□□□□ -0.36
HNRNPC-230ENST00000557201 IGHDP01880 384 aa12.78□□□□□ -0.36
HNRNPC-230ENST00000557201 GNAT2P19087 354 aa12.78□□□□□ -0.36
HNRNPC-230ENST00000557201 CST5P28325 142 aaPredicted RBP12.78□□□□□ -0.36
HNRNPC-230ENST00000557201 IRX5P78411 483 aaPredicted RBP12.78□□□□□ -0.36
HNRNPC-230ENST00000557201 SMC5Q8IY18 1101 aa12.78□□□□□ -0.36
HNRNPC-230ENST00000557201 IFNL3Q8IZI9 196 aa12.78□□□□□ -0.36
HNRNPC-230ENST00000557201 GMCL1P1Q8NEA9 526 aa12.78□□□□□ -0.36
HNRNPC-230ENST00000557201 KATNBL1Q9H079 304 aa12.78□□□□□ -0.36
HNRNPC-230ENST00000557201 RAVER2Q9HCJ3 691 aaKnown RBP12.78□□□□□ -0.36
HNRNPC-230ENST00000557201 FEM1BQ9UK73 627 aa12.78□□□□□ -0.36
HNRNPC-230ENST00000557201 FAM184BQ9ULE4 1060 aa12.78□□□□□ -0.36
HNRNPC-230ENST00000557201 CTAGE5O15320 804 aa12.77□□□□□ -0.37
HNRNPC-230ENST00000557201 PQBP1O60828 265 aaKnown RBP12.77□□□□□ -0.37
HNRNPC-230ENST00000557201 ZBED4O75132 1171 aa12.77□□□□□ -0.37
HNRNPC-230ENST00000557201 TTLL1O95922 423 aa12.77□□□□□ -0.37
HNRNPC-230ENST00000557201 CDK7P50613 346 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms