RNA–Protein interactions for RNA: ENST00000556975.5

TMEM260-214, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-214ENST00000556975 IL17RBQ9NRM6 502 aa26.87■■□□□ 1.89
TMEM260-214ENST00000556975 RANBP2P49792 3224 aaKnown RBP26.87■■□□□ 1.89
TMEM260-214ENST00000556975 EVI5O60447 810 aa26.86■■□□□ 1.89
TMEM260-214ENST00000556975 BMP3P12645 472 aa26.86■■□□□ 1.89
TMEM260-214ENST00000556975 CYBAP13498 195 aa26.86■■□□□ 1.89
TMEM260-214ENST00000556975 MFAP1P55081 439 aaKnown RBP26.86■■□□□ 1.89
TMEM260-214ENST00000556975 TRPV1Q8NER1 839 aa26.86■■□□□ 1.89
TMEM260-214ENST00000556975 GMCL1Q96IK5 515 aa26.86■■□□□ 1.89
TMEM260-214ENST00000556975 MAML3Q96JK9 1138 aa26.86■■□□□ 1.89
TMEM260-214ENST00000556975 DDX20Q9UHI6 824 aaKnown RBP26.86■■□□□ 1.89
TMEM260-214ENST00000556975 DIS3Q9Y2L1 958 aaKnown RBP26.86■■□□□ 1.89
TMEM260-214ENST00000556975 ZBED4O75132 1171 aa26.85■■□□□ 1.89
TMEM260-214ENST00000556975 COL6A1P12109 1028 aa26.85■■□□□ 1.89
TMEM260-214ENST00000556975 KCTD2Q14681 263 aa26.85■■□□□ 1.89
TMEM260-214ENST00000556975 SLC38A10Q9HBR0 1119 aa26.85■■□□□ 1.89
TMEM260-214ENST00000556975 RANBP6O60518 1105 aaKnown RBP26.84■■□□□ 1.89
TMEM260-214ENST00000556975 FDX1P10109 184 aa26.84■■□□□ 1.89
TMEM260-214ENST00000556975 CHRDL2Q6WN34 429 aa26.84■■□□□ 1.89
TMEM260-214ENST00000556975 KIFC2Q96AC6 838 aa26.84■■□□□ 1.89
TMEM260-214ENST00000556975 STX8Q9UNK0 236 aa26.84■■□□□ 1.89
TMEM260-214ENST00000556975 ALPK3Q96L96 1907 aa26.83■■□□□ 1.89
TMEM260-214ENST00000556975 PLA2G6O60733 806 aa26.83■■□□□ 1.89
TMEM260-214ENST00000556975 CNGA1P29973 690 aa26.83■■□□□ 1.89
TMEM260-214ENST00000556975 OAZ1P54368 228 aa26.83■■□□□ 1.89
TMEM260-214ENST00000556975 ZNF792Q3KQV3 632 aa26.83■■□□□ 1.89
TMEM260-214ENST00000556975 SNRNP48Q6IEG0 339 aaKnown RBP26.83■■□□□ 1.89
TMEM260-214ENST00000556975 RIPK3Q9Y572 518 aa26.83■■□□□ 1.89
TMEM260-214ENST00000556975 FRMPD3Q5JV73 1810 aa26.82■■□□□ 1.88
TMEM260-214ENST00000556975 HIP1O00291 1037 aa26.82■■□□□ 1.88
TMEM260-214ENST00000556975 NMT2O60551 498 aa26.82■■□□□ 1.88
TMEM260-214ENST00000556975 PCP11498 1178 aaKnown RBP26.82■■□□□ 1.88
TMEM260-214ENST00000556975 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.82■■□□□ 1.88
TMEM260-214ENST00000556975 CHURC1Q8WUH1 139 aa26.82■■□□□ 1.88
TMEM260-214ENST00000556975 TCP11L1Q9NUJ3 509 aa26.82■■□□□ 1.88
TMEM260-214ENST00000556975 NRBP1Q9UHY1 535 aa26.82■■□□□ 1.88
TMEM260-214ENST00000556975 PFASO15067 1338 aa26.82■■□□□ 1.88
TMEM260-214ENST00000556975 TMEM232C9JQI7 657 aa26.81■■□□□ 1.88
TMEM260-214ENST00000556975 PGK2P07205 417 aa26.81■■□□□ 1.88
TMEM260-214ENST00000556975 SLC1A4P43007 532 aa26.81■■□□□ 1.88
TMEM260-214ENST00000556975 STAT2P52630 851 aa26.81■■□□□ 1.88
TMEM260-214ENST00000556975 FAM160B2Q86V87 743 aa26.81■■□□□ 1.88
TMEM260-214ENST00000556975 CPXCR1Q8N123 301 aa26.81■■□□□ 1.88
TMEM260-214ENST00000556975 STAG1Q8WVM7 1258 aa26.81■■□□□ 1.88
TMEM260-214ENST00000556975 CTDP1Q9Y5B0 961 aaPredicted RBP26.81■■□□□ 1.88
TMEM260-214ENST00000556975 SEPT4O43236 478 aa26.8■■□□□ 1.88
TMEM260-214ENST00000556975 MCCP23508 829 aa26.8■■□□□ 1.88
TMEM260-214ENST00000556975 RCSD1Q6JBY9 416 aa26.8■■□□□ 1.88
TMEM260-214ENST00000556975 AKNAD1Q5T1N1 836 aa26.79■■□□□ 1.88
TMEM260-214ENST00000556975 CWC27Q6UX04 472 aaKnown RBP26.79■■□□□ 1.88
TMEM260-214ENST00000556975 TINF2Q9BSI4 451 aa26.79■■□□□ 1.88
TMEM260-214ENST00000556975 PRO3102Q9H379 93 aa26.79■■□□□ 1.88
TMEM260-214ENST00000556975 RAVER2Q9HCJ3 691 aaKnown RBP26.79■■□□□ 1.88
TMEM260-214ENST00000556975 DIAPH3Q9NSV4 1193 aa26.79■■□□□ 1.88
TMEM260-214ENST00000556975 PLXNA1Q9UIW2 1896 aa26.79■■□□□ 1.88
TMEM260-214ENST00000556975 DNAJC25-GNG10A0A024R161 153 aa26.78■■□□□ 1.88
TMEM260-214ENST00000556975 PDE4AP27815 886 aa26.78■■□□□ 1.88
TMEM260-214ENST00000556975 HAND2P61296 217 aa26.78■■□□□ 1.88
TMEM260-214ENST00000556975 PRAMEF19Q5SWL8 479 aa26.78■■□□□ 1.88
TMEM260-214ENST00000556975 MSL3Q8N5Y2 521 aaKnown RBP26.78■■□□□ 1.88
TMEM260-214ENST00000556975 CHST13Q8NET6 341 aa26.78■■□□□ 1.88
TMEM260-214ENST00000556975 TOMM22Q9NS69 142 aa26.78■■□□□ 1.88
TMEM260-214ENST00000556975 FBXO40Q9UH90 709 aa26.78■■□□□ 1.88
TMEM260-214ENST00000556975 SZT2Q5T011 3432 aa26.77■■□□□ 1.88
TMEM260-214ENST00000556975 RRP12Q5JTH9 1297 aaKnown RBP26.77■■□□□ 1.88
TMEM260-214ENST00000556975 MFSD6Q6ZSS7 791 aa26.77■■□□□ 1.88
TMEM260-214ENST00000556975 DDX11Q96FC9 970 aa26.77■■□□□ 1.88
TMEM260-214ENST00000556975 DNM1LO00429 736 aa26.76■■□□□ 1.87
TMEM260-214ENST00000556975 NT5C2P49902 561 aa26.76■■□□□ 1.87
TMEM260-214ENST00000556975 ARRDC4Q8NCT1 418 aa26.76■■□□□ 1.87
TMEM260-214ENST00000556975 TTC14Q96N46 770 aa26.76■■□□□ 1.87
TMEM260-214ENST00000556975 RNF41Q9H4P4 317 aaPredicted RBP26.76■■□□□ 1.87
TMEM260-214ENST00000556975 ZNF213O14771 459 aa26.75■■□□□ 1.87
TMEM260-214ENST00000556975 TOP1P11387 765 aaKnown RBP26.75■■□□□ 1.87
TMEM260-214ENST00000556975 IRX6P78412 446 aaPredicted RBP26.75■■□□□ 1.87
TMEM260-214ENST00000556975 MAMDC4Q6UXC1 1216 aa26.75■■□□□ 1.87
TMEM260-214ENST00000556975 KCTD1Q719H9 257 aa26.75■■□□□ 1.87
TMEM260-214ENST00000556975 C7orf61Q8IZ16 206 aa26.75■■□□□ 1.87
TMEM260-214ENST00000556975 DCAF4Q8WV16 495 aa26.75■■□□□ 1.87
TMEM260-214ENST00000556975 TMEM47Q9BQJ4 181 aa26.75■■□□□ 1.87
TMEM260-214ENST00000556975 DSCC1Q9BVC3 393 aa26.75■■□□□ 1.87
TMEM260-214ENST00000556975 RBM27Q9P2N5 1060 aaKnown RBP26.75■■□□□ 1.87
TMEM260-214ENST00000556975 ZNF536O15090 1300 aa26.74■■□□□ 1.87
TMEM260-214ENST00000556975 SMCHD1A6NHR9 2005 aa26.74■■□□□ 1.87
TMEM260-214ENST00000556975 SLC4A3P48751 1232 aa26.74■■□□□ 1.87
TMEM260-214ENST00000556975 ZNF467Q7Z7K2 595 aaPredicted RBP26.74■■□□□ 1.87
TMEM260-214ENST00000556975 TBC1D10CQ8IV04 446 aa26.74■■□□□ 1.87
TMEM260-214ENST00000556975 ISY1Q9ULR0 285 aaKnown RBP26.74■■□□□ 1.87
TMEM260-214ENST00000556975 IKQ13123 557 aaPredicted RBP26.73■■□□□ 1.87
TMEM260-214ENST00000556975 TTC22Q5TAA0 569 aa26.73■■□□□ 1.87
TMEM260-214ENST00000556975 SENP6Q9GZR1 1112 aaPredicted RBP26.73■■□□□ 1.87
TMEM260-214ENST00000556975 PRR12Q9ULL5 1215 aa26.73■■□□□ 1.87
TMEM260-214ENST00000556975 SYNGAP1Q96PV0 1343 aa26.72■■□□□ 1.87
TMEM260-214ENST00000556975 ZNF865P0CJ78 1059 aaPredicted RBP26.72■■□□□ 1.87
TMEM260-214ENST00000556975 GSPT1P15170 499 aaKnown RBP26.72■■□□□ 1.87
TMEM260-214ENST00000556975 LRRC26Q2I0M4 334 aa26.72■■□□□ 1.87
TMEM260-214ENST00000556975 TKFCQ3LXA3 575 aa26.72■■□□□ 1.87
TMEM260-214ENST00000556975 BTNL9Q6UXG8 535 aa26.72■■□□□ 1.87
TMEM260-214ENST00000556975 ANKRD35Q8N283 1001 aa26.72■■□□□ 1.87
TMEM260-214ENST00000556975 ESR2Q92731 530 aa26.72■■□□□ 1.87
TMEM260-214ENST00000556975 CHMP4CQ96CF2 233 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms