RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 SUGP1Q8IWZ8 645 aaKnown RBP7.19□□□□□ -1.26
ATXN3-245ENST00000556958 ARNTL2Q8WYA1 636 aa7.19□□□□□ -1.26
ATXN3-245ENST00000556958 ATOH1Q92858 354 aaPredicted RBP7.19□□□□□ -1.26
ATXN3-245ENST00000556958 VTI1AQ96AJ9 217 aa7.19□□□□□ -1.26
ATXN3-245ENST00000556958 GLT1D1Q96MS3 346 aa7.19□□□□□ -1.26
ATXN3-245ENST00000556958 SLC24A3Q9HC58 644 aa7.19□□□□□ -1.26
ATXN3-245ENST00000556958 ELP1O95163 1332 aa7.19□□□□□ -1.26
ATXN3-245ENST00000556958 CACNA1BQ00975 2339 aa7.18□□□□□ -1.26
ATXN3-245ENST00000556958 PDE8BO95263 885 aa7.18□□□□□ -1.26
ATXN3-245ENST00000556958 PGK1P00558 417 aa7.18□□□□□ -1.26
ATXN3-245ENST00000556958 CA3P07451 260 aa7.18□□□□□ -1.26
ATXN3-245ENST00000556958 MYOGP15173 224 aa7.18□□□□□ -1.26
ATXN3-245ENST00000556958 ADORA2AP29274 412 aa7.18□□□□□ -1.26
ATXN3-245ENST00000556958 PRDX5P30044 214 aa7.18□□□□□ -1.26
ATXN3-245ENST00000556958 CDK7P50613 346 aa7.18□□□□□ -1.26
ATXN3-245ENST00000556958 GNAI1P63096 354 aa7.18□□□□□ -1.26
ATXN3-245ENST00000556958 NBPF20Q3BBV1 942 aa7.18□□□□□ -1.26
ATXN3-245ENST00000556958 PRAMEF19Q5SWL8 479 aa7.18□□□□□ -1.26
ATXN3-245ENST00000556958 KRT40Q6A162 431 aa7.18□□□□□ -1.26
ATXN3-245ENST00000556958 USP17L2Q6R6M4 530 aa7.18□□□□□ -1.26
ATXN3-245ENST00000556958 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.18□□□□□ -1.26
ATXN3-245ENST00000556958 DNAAF4Q8WXU2 420 aa7.18□□□□□ -1.26
ATXN3-245ENST00000556958 PPP1R12CQ9BZL4 782 aa7.18□□□□□ -1.26
ATXN3-245ENST00000556958 CERS4Q9HA82 394 aa7.18□□□□□ -1.26
ATXN3-245ENST00000556958 GNL3LQ9NVN8 582 aaKnown RBP7.18□□□□□ -1.26
ATXN3-245ENST00000556958 PRKAG3Q9UGI9 489 aa7.18□□□□□ -1.26
ATXN3-245ENST00000556958 HERC5Q9UII4 1024 aaKnown RBP7.18□□□□□ -1.26
ATXN3-245ENST00000556958 EPG5Q9HCE0 2579 aa7.18□□□□□ -1.26
ATXN3-245ENST00000556958 ZNF536O15090 1300 aa7.18□□□□□ -1.26
ATXN3-245ENST00000556958 KIF16BQ96L93 1317 aa7.18□□□□□ -1.26
ATXN3-245ENST00000556958 CHD9Q3L8U1 2897 aa7.17□□□□□ -1.26
ATXN3-245ENST00000556958 ARVCFO00192 962 aa7.17□□□□□ -1.26
ATXN3-245ENST00000556958 MAP4K4O95819 1239 aaPredicted RBP7.17□□□□□ -1.26
ATXN3-245ENST00000556958 SLURP2P0DP57 97 aa7.17□□□□□ -1.26
ATXN3-245ENST00000556958 KCNA5P22460 613 aa7.17□□□□□ -1.26
ATXN3-245ENST00000556958 CYP2C18P33260 490 aa7.17□□□□□ -1.26
ATXN3-245ENST00000556958 TCF15Q12870 199 aa7.17□□□□□ -1.26
ATXN3-245ENST00000556958 GRB10Q13322 594 aa7.17□□□□□ -1.26
ATXN3-245ENST00000556958 LBX2Q6XYB7 198 aa7.17□□□□□ -1.26
ATXN3-245ENST00000556958 NUDT18Q6ZVK8 323 aa7.17□□□□□ -1.26
ATXN3-245ENST00000556958 ABRAQ8N0Z2 381 aa7.17□□□□□ -1.26
ATXN3-245ENST00000556958 ZGPATQ8N5A5 531 aaKnown RBP7.17□□□□□ -1.26
ATXN3-245ENST00000556958 PCSK9Q8NBP7 692 aaKnown RBP7.17□□□□□ -1.26
ATXN3-245ENST00000556958 PHOSPHO2Q8TCD6 241 aa7.17□□□□□ -1.26
ATXN3-245ENST00000556958 COL26A1Q96A83 441 aa7.17□□□□□ -1.26
ATXN3-245ENST00000556958 PBXIP1Q96AQ6 731 aa7.17□□□□□ -1.26
ATXN3-245ENST00000556958 PUS3Q9BZE2 481 aaKnown RBP7.17□□□□□ -1.26
ATXN3-245ENST00000556958 IFT57Q9NWB7 429 aa7.17□□□□□ -1.26
ATXN3-245ENST00000556958 ARAP2Q8WZ64 1704 aa7.17□□□□□ -1.26
ATXN3-245ENST00000556958 ECM29Q5VYK3 1845 aa7.17□□□□□ -1.26
ATXN3-245ENST00000556958 CFAP54Q96N23 3096 aa7.16□□□□□ -1.26
ATXN3-245ENST00000556958 MGAMO43451 1857 aa7.16□□□□□ -1.26
ATXN3-245ENST00000556958 A0A0U1RQG5 324 aaPredicted RBP7.16□□□□□ -1.26
ATXN3-245ENST00000556958 FAM196BA6NMK8 535 aa7.16□□□□□ -1.26
ATXN3-245ENST00000556958 PROB1E7EW31 1015 aa7.16□□□□□ -1.26
ATXN3-245ENST00000556958 CNMDO75829 334 aa7.16□□□□□ -1.26
ATXN3-245ENST00000556958 AVPP01185 164 aa7.16□□□□□ -1.26
ATXN3-245ENST00000556958 PFKMP08237 780 aa7.16□□□□□ -1.26
ATXN3-245ENST00000556958 ZNF853P0CG23 659 aa7.16□□□□□ -1.26
ATXN3-245ENST00000556958 AKR1A1P14550 325 aa7.16□□□□□ -1.26
ATXN3-245ENST00000556958 IL9P15248 144 aa7.16□□□□□ -1.26
ATXN3-245ENST00000556958 PUM3Q15397 648 aaKnown RBP7.16□□□□□ -1.26
ATXN3-245ENST00000556958 KCNA10Q16322 511 aa7.16□□□□□ -1.26
ATXN3-245ENST00000556958 HERC4Q5GLZ8 1057 aaPredicted RBP7.16□□□□□ -1.26
ATXN3-245ENST00000556958 SWT1Q5T5J6 900 aaKnown RBP7.16□□□□□ -1.26
ATXN3-245ENST00000556958 BLOC1S3Q6QNY0 202 aa7.16□□□□□ -1.26
ATXN3-245ENST00000556958 C8orf58Q8NAV2 365 aa7.16□□□□□ -1.26
ATXN3-245ENST00000556958 EDAQ92838 391 aa7.16□□□□□ -1.26
ATXN3-245ENST00000556958 HIPK3Q9H422 1215 aa7.16□□□□□ -1.26
ATXN3-245ENST00000556958 SPC25Q9HBM1 224 aa7.16□□□□□ -1.26
ATXN3-245ENST00000556958 DDX4Q9NQI0 724 aaKnown RBP7.16□□□□□ -1.26
ATXN3-245ENST00000556958 SPTBN4Q9H254 2564 aa7.16□□□□□ -1.26
ATXN3-245ENST00000556958 CLSPNQ9HAW4 1339 aa7.16□□□□□ -1.26
ATXN3-245ENST00000556958 EPOPA6NHQ4 379 aa7.15□□□□□ -1.26
ATXN3-245ENST00000556958 COBLO75128 1261 aa7.15□□□□□ -1.26
ATXN3-245ENST00000556958 S1PR4O95977 384 aa7.15□□□□□ -1.26
ATXN3-245ENST00000556958 ACTN1P12814 892 aa7.15□□□□□ -1.26
ATXN3-245ENST00000556958 USP14P54578 494 aa7.15□□□□□ -1.26
ATXN3-245ENST00000556958 TAP1Q03518 808 aa7.15□□□□□ -1.26
ATXN3-245ENST00000556958 TRIM26Q12899 539 aaPredicted RBP7.15□□□□□ -1.26
ATXN3-245ENST00000556958 FKBP5Q13451 457 aaPredicted RBP7.15□□□□□ -1.26
ATXN3-245ENST00000556958 SUZ12Q15022 739 aaKnown RBP7.15□□□□□ -1.26
ATXN3-245ENST00000556958 SPTY2D1Q68D10 685 aaPredicted RBP7.15□□□□□ -1.26
ATXN3-245ENST00000556958 CATSPERGQ6ZRH7 1159 aa7.15□□□□□ -1.26
ATXN3-245ENST00000556958 DZIP1Q86YF9 867 aaKnown RBP7.15□□□□□ -1.26
ATXN3-245ENST00000556958 ADHFE1Q8IWW8 467 aa7.15□□□□□ -1.26
ATXN3-245ENST00000556958 SHCBP1Q8NEM2 672 aa7.15□□□□□ -1.26
ATXN3-245ENST00000556958 ANKS1AQ92625 1134 aa7.15□□□□□ -1.26
ATXN3-245ENST00000556958 RUNDC1Q96C34 613 aa7.15□□□□□ -1.26
ATXN3-245ENST00000556958 MAML3Q96JK9 1138 aa7.15□□□□□ -1.26
ATXN3-245ENST00000556958 POP1Q99575 1024 aaKnown RBP7.15□□□□□ -1.26
ATXN3-245ENST00000556958 SEZ6LQ9BYH1 1024 aa7.15□□□□□ -1.26
ATXN3-245ENST00000556958 TRIM34Q9BYJ4 488 aa7.15□□□□□ -1.26
ATXN3-245ENST00000556958 MROH8Q9H579 483 aa7.15□□□□□ -1.26
ATXN3-245ENST00000556958 FAM86C1Q9NVL1 165 aa7.15□□□□□ -1.26
ATXN3-245ENST00000556958 HOXC10Q9NYD6 342 aa7.15□□□□□ -1.26
ATXN3-245ENST00000556958 PKD2L1Q9P0L9 805 aa7.15□□□□□ -1.26
ATXN3-245ENST00000556958 BTBD7Q9P203 1132 aa7.15□□□□□ -1.26
ATXN3-245ENST00000556958 PI4KBQ9UBF8 816 aa7.15□□□□□ -1.26
ATXN3-245ENST00000556958 DENND2AQ9ULE3 1009 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms