RNA–Protein interactions for RNA: ENST00000556916.5

FOXN3-213, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-213ENST00000556916 USHBP1Q8N6Y0 703 aa5.49□□□□□ -1.53
FOXN3-213ENST00000556916 ZNF655Q8N720 491 aaPredicted RBP5.49□□□□□ -1.53
FOXN3-213ENST00000556916 HHIPL1Q96JK4 782 aa5.49□□□□□ -1.53
FOXN3-213ENST00000556916 LRRC3Q9BY71 257 aa5.49□□□□□ -1.53
FOXN3-213ENST00000556916 ZCCHC4Q9H5U6 513 aa5.49□□□□□ -1.53
FOXN3-213ENST00000556916 ADAMTS1Q9UHI8 967 aa5.49□□□□□ -1.53
FOXN3-213ENST00000556916 MBD1Q9UIS9 605 aaPredicted RBP5.49□□□□□ -1.53
FOXN3-213ENST00000556916 KCTD3Q9Y597 815 aa5.49□□□□□ -1.53
FOXN3-213ENST00000556916 SSU72P8A0A1W2PR75 194 aa5.48□□□□□ -1.53
FOXN3-213ENST00000556916 PRAMEF1O95521 474 aa5.48□□□□□ -1.53
FOXN3-213ENST00000556916 SYPP08247 313 aa5.48□□□□□ -1.53
FOXN3-213ENST00000556916 SDHBP21912 280 aa5.48□□□□□ -1.53
FOXN3-213ENST00000556916 ZNF76P36508 570 aa5.48□□□□□ -1.53
FOXN3-213ENST00000556916 KIR2DL1P43626 348 aaPredicted RBP5.48□□□□□ -1.53
FOXN3-213ENST00000556916 KIR2DL2P43627 348 aaPredicted RBP5.48□□□□□ -1.53
FOXN3-213ENST00000556916 CRKP46108 304 aa5.48□□□□□ -1.53
FOXN3-213ENST00000556916 RACK1P63244 317 aaKnown RBP5.48□□□□□ -1.53
FOXN3-213ENST00000556916 NBPF9Q3BBW0 867 aa5.48□□□□□ -1.53
FOXN3-213ENST00000556916 ZNF385BQ569K4 471 aa5.48□□□□□ -1.53
FOXN3-213ENST00000556916 NBPF12Q5TAG4 269 aaPredicted RBP5.48□□□□□ -1.53
FOXN3-213ENST00000556916 TCERG1LQ5VWI1 586 aa5.48□□□□□ -1.53
FOXN3-213ENST00000556916 ZNF512BQ96KM6 892 aaPredicted RBP5.48□□□□□ -1.53
FOXN3-213ENST00000556916 C20orf173Q96LM9 149 aa5.48□□□□□ -1.53
FOXN3-213ENST00000556916 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.48□□□□□ -1.534e-7■■■■■ 36.2
FOXN3-213ENST00000556916 BCL11AQ9H165 835 aa5.48□□□□□ -1.53
FOXN3-213ENST00000556916 PARD6AQ9NPB6 346 aa5.48□□□□□ -1.53
FOXN3-213ENST00000556916 MINPP1Q9UNW1 487 aa5.48□□□□□ -1.53
FOXN3-213ENST00000556916 SUPT16HQ9Y5B9 1047 aaKnown RBP5.48□□□□□ -1.53
FOXN3-213ENST00000556916 A0A0G2JLL6 359 aaPredicted RBP5.47□□□□□ -1.53
FOXN3-213ENST00000556916 TRIM13O60858 407 aa5.47□□□□□ -1.53
FOXN3-213ENST00000556916 VAMP1P23763 118 aa5.47□□□□□ -1.53
FOXN3-213ENST00000556916 EIF4A3P38919 411 aaKnown RBP5.47□□□□□ -1.53
FOXN3-213ENST00000556916 RBM25P49756 843 aaKnown RBP5.47□□□□□ -1.53
FOXN3-213ENST00000556916 EPHB3P54753 998 aa5.47□□□□□ -1.53
FOXN3-213ENST00000556916 SRSF3P84103 164 aaKnown RBP5.47□□□□□ -1.53
FOXN3-213ENST00000556916 HDLBPQ00341 1268 aaKnown RBP5.47□□□□□ -1.53
FOXN3-213ENST00000556916 METTL16Q86W50 562 aaKnown RBP5.47□□□□□ -1.53
FOXN3-213ENST00000556916 LINC00116Q8NCU8 138 aa5.47□□□□□ -1.53
FOXN3-213ENST00000556916 ZNF296Q8WUU4 475 aaPredicted RBP5.47□□□□□ -1.53
FOXN3-213ENST00000556916 FCRL2Q96LA5 508 aaPredicted RBP5.47□□□□□ -1.53
FOXN3-213ENST00000556916 PLCD4Q9BRC7 762 aa5.47□□□□□ -1.53
FOXN3-213ENST00000556916 KCNQ5Q9NR82 932 aa5.47□□□□□ -1.53
FOXN3-213ENST00000556916 UBP1Q9NZI7 540 aa5.47□□□□□ -1.53
FOXN3-213ENST00000556916 GPR55Q9Y2T6 319 aaPredicted RBP5.47□□□□□ -1.53
FOXN3-213ENST00000556916 CLSPNQ9HAW4 1339 aa5.47□□□□□ -1.53
FOXN3-213ENST00000556916 HRKO00198 91 aa5.46□□□□□ -1.54
FOXN3-213ENST00000556916 SIGLEC6O43699 453 aa5.46□□□□□ -1.54
FOXN3-213ENST00000556916 ATE1O95260 518 aa5.46□□□□□ -1.54
FOXN3-213ENST00000556916 ITGAEP38570 1179 aa5.46□□□□□ -1.54
FOXN3-213ENST00000556916 EAF1Q96JC9 268 aaPredicted RBP5.46□□□□□ -1.54
FOXN3-213ENST00000556916 SIGLEC10Q96LC7 697 aa5.46□□□□□ -1.54
FOXN3-213ENST00000556916 KCNC2Q96PR1 638 aa5.46□□□□□ -1.54
FOXN3-213ENST00000556916 KRTAP9-3Q9BYQ3 159 aa5.46□□□□□ -1.54
FOXN3-213ENST00000556916 PRDM14Q9GZV8 571 aa5.46□□□□□ -1.54
FOXN3-213ENST00000556916 CRTAC1Q9NQ79 661 aa5.46□□□□□ -1.54
FOXN3-213ENST00000556916 SIRT5Q9NXA8 310 aa5.46□□□□□ -1.54
FOXN3-213ENST00000556916 IRAK3Q9Y616 596 aa5.46□□□□□ -1.54
FOXN3-213ENST00000556916 TAF6LQ9Y6J9 622 aa5.46□□□□□ -1.54
FOXN3-213ENST00000556916 MEIS1O00470 390 aa5.45□□□□□ -1.54
FOXN3-213ENST00000556916 GREM1O60565 184 aa5.45□□□□□ -1.54
FOXN3-213ENST00000556916 CLEC3AO75596 197 aa5.45□□□□□ -1.54
FOXN3-213ENST00000556916 VIPR1P32241 457 aa5.45□□□□□ -1.54
FOXN3-213ENST00000556916 KIR3DS1Q14943 382 aa5.45□□□□□ -1.54
FOXN3-213ENST00000556916 SEZ6Q53EL9 994 aa5.45□□□□□ -1.54
FOXN3-213ENST00000556916 CDCP2Q5VXM1 449 aa5.45□□□□□ -1.54
FOXN3-213ENST00000556916 GK5Q6ZS86 529 aa5.45□□□□□ -1.54
FOXN3-213ENST00000556916 NLRC3Q7RTR2 1065 aa5.45□□□□□ -1.54
FOXN3-213ENST00000556916 USP48Q86UV5 1035 aa5.45□□□□□ -1.54
FOXN3-213ENST00000556916 TMEM151BQ8IW70 566 aa5.45□□□□□ -1.54
FOXN3-213ENST00000556916 PANK1Q8TE04 598 aa5.45□□□□□ -1.54
FOXN3-213ENST00000556916 RNF34Q969K3 372 aa5.45□□□□□ -1.54
FOXN3-213ENST00000556916 ANP32EQ9BTT0 268 aa5.45□□□□□ -1.54
FOXN3-213ENST00000556916 MKRN2Q9H000 416 aaKnown RBP5.45□□□□□ -1.54
FOXN3-213ENST00000556916 CNNM2Q9H8M5 875 aa5.45□□□□□ -1.54
FOXN3-213ENST00000556916 ADAMTS20P59510 1910 aa5.44□□□□□ -1.54
FOXN3-213ENST00000556916 ROBO2Q9HCK4 1378 aa5.44□□□□□ -1.54
FOXN3-213ENST00000556916 SCAMP3O14828 347 aaKnown RBP5.44□□□□□ -1.54
FOXN3-213ENST00000556916 PNLIPP16233 465 aa5.44□□□□□ -1.54
FOXN3-213ENST00000556916 RTP1P59025 263 aa5.44□□□□□ -1.54
FOXN3-213ENST00000556916 RAD51AP2Q09MP3 1159 aa5.44□□□□□ -1.54
FOXN3-213ENST00000556916 HSF5Q4G112 596 aaPredicted RBP5.44□□□□□ -1.54
FOXN3-213ENST00000556916 RELTQ969Z4 430 aa5.44□□□□□ -1.54
FOXN3-213ENST00000556916 ATG4CQ96DT6 458 aa5.44□□□□□ -1.54
FOXN3-213ENST00000556916 CNTD2Q9H8S5 307 aa5.44□□□□□ -1.54
FOXN3-213ENST00000556916 METTL5Q9NRN9 209 aaKnown RBP5.44□□□□□ -1.54
FOXN3-213ENST00000556916 CHST7Q9NS84 486 aa5.44□□□□□ -1.54
FOXN3-213ENST00000556916 GFOD1Q9NXC2 390 aa5.44□□□□□ -1.54
FOXN3-213ENST00000556916 DDX41Q9UJV9 622 aaKnown RBP5.44□□□□□ -1.54
FOXN3-213ENST00000556916 FADS2P1A8MWK0 482 aa5.43□□□□□ -1.54
FOXN3-213ENST00000556916 N4BP3O15049 544 aa5.43□□□□□ -1.54
FOXN3-213ENST00000556916 AFF3P51826 1226 aaKnown RBP5.43□□□□□ -1.54
FOXN3-213ENST00000556916 CDR1P51861 262 aa5.43□□□□□ -1.54
FOXN3-213ENST00000556916 ERVFRD-1P60508 538 aa5.43□□□□□ -1.54
FOXN3-213ENST00000556916 CLCQ05315 142 aa5.43□□□□□ -1.54
FOXN3-213ENST00000556916 APOBRQ0VD83 1088 aa5.43□□□□□ -1.54
FOXN3-213ENST00000556916 OLFML2BQ68BL8 750 aa5.43□□□□□ -1.54
FOXN3-213ENST00000556916 CRTC3Q6UUV7 619 aa5.43□□□□□ -1.54
FOXN3-213ENST00000556916 NT5DC4Q86YG4 428 aa5.43□□□□□ -1.54
FOXN3-213ENST00000556916 TMEM192Q8IY95 271 aa5.43□□□□□ -1.54
FOXN3-213ENST00000556916 MARCH10Q8NA82 808 aaPredicted RBP5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms