RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 TSEN34Q9BSV6 310 aaKnown RBP10.88□□□□□ -0.67
HNRNPC-227ENST00000556897 KANSL2Q9H9L4 492 aa10.88□□□□□ -0.67
HNRNPC-227ENST00000556897 GOPCQ9HD26 462 aa10.88□□□□□ -0.67
HNRNPC-227ENST00000556897 ATP8A2Q9NTI2 1148 aa10.88□□□□□ -0.67
HNRNPC-227ENST00000556897 PLXNA1Q9UIW2 1896 aa10.88□□□□□ -0.67
HNRNPC-227ENST00000556897 MYADML2A6NDP7 307 aa10.87□□□□□ -0.67
HNRNPC-227ENST00000556897 MOXD2PA6NHM9 499 aa10.87□□□□□ -0.67
HNRNPC-227ENST00000556897 SNAI1O95863 264 aaPredicted RBP10.87□□□□□ -0.67
HNRNPC-227ENST00000556897 TIMP1P01033 207 aa10.87□□□□□ -0.67
HNRNPC-227ENST00000556897 CHGBP05060 677 aa10.87□□□□□ -0.67
HNRNPC-227ENST00000556897 IFIT2P09913 472 aaKnown RBP10.87□□□□□ -0.67
HNRNPC-227ENST00000556897 COPB2P35606 906 aa10.87□□□□□ -0.67
HNRNPC-227ENST00000556897 ADD2P35612 726 aa10.87□□□□□ -0.67
HNRNPC-227ENST00000556897 KCNA10Q16322 511 aa10.87□□□□□ -0.67
HNRNPC-227ENST00000556897 HSP90AB4PQ58FF6 505 aa10.87□□□□□ -0.67
HNRNPC-227ENST00000556897 CCSAPQ6IQ19 270 aaPredicted RBP10.87□□□□□ -0.67
HNRNPC-227ENST00000556897 C16orf86Q6ZW13 317 aa10.87□□□□□ -0.67
HNRNPC-227ENST00000556897 AMOTL1Q8IY63 956 aa10.87□□□□□ -0.67
HNRNPC-227ENST00000556897 KLHDC9Q8NEP7 349 aa10.87□□□□□ -0.67
HNRNPC-227ENST00000556897 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.87□□□□□ -0.672e-8■■■□□ 14.8
HNRNPC-227ENST00000556897 ZHX1Q9UKY1 873 aaPredicted RBP10.87□□□□□ -0.67
HNRNPC-227ENST00000556897 TBX21Q9UL17 535 aa10.87□□□□□ -0.67
HNRNPC-227ENST00000556897 FAM184BQ9ULE4 1060 aa10.87□□□□□ -0.67
HNRNPC-227ENST00000556897 GRXCR1A8MXD5 290 aa10.86□□□□□ -0.67
HNRNPC-227ENST00000556897 TNFRSF10AO00220 468 aa10.86□□□□□ -0.67
HNRNPC-227ENST00000556897 PBX2P40425 430 aa10.86□□□□□ -0.67
HNRNPC-227ENST00000556897 IRX5P78411 483 aaPredicted RBP10.86□□□□□ -0.67
HNRNPC-227ENST00000556897 SNRNP48Q6IEG0 339 aaKnown RBP10.86□□□□□ -0.67
HNRNPC-227ENST00000556897 MFSD5Q6N075 450 aa10.86□□□□□ -0.67
HNRNPC-227ENST00000556897 C16orf59Q7L2K0 433 aa10.86□□□□□ -0.67
HNRNPC-227ENST00000556897 MSL3Q8N5Y2 521 aaKnown RBP10.86□□□□□ -0.67
HNRNPC-227ENST00000556897 PANK1Q8TE04 598 aa10.86□□□□□ -0.67
HNRNPC-227ENST00000556897 PPM1EQ8WY54 764 aa10.86□□□□□ -0.67
HNRNPC-227ENST00000556897 KIF1BPQ96EK5 621 aa10.86□□□□□ -0.67
HNRNPC-227ENST00000556897 DDX11Q96FC9 970 aa10.86□□□□□ -0.67
HNRNPC-227ENST00000556897 DDRGK1Q96HY6 314 aa10.86□□□□□ -0.67
HNRNPC-227ENST00000556897 GLT1D1Q96MS3 346 aa10.86□□□□□ -0.67
HNRNPC-227ENST00000556897 NUP88Q99567 741 aaPredicted RBP10.86□□□□□ -0.67
HNRNPC-227ENST00000556897 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.86□□□□□ -0.67
HNRNPC-227ENST00000556897 TEX13BQ9BXU2 312 aa10.86□□□□□ -0.67
HNRNPC-227ENST00000556897 PBX4Q9BYU1 374 aa10.86□□□□□ -0.67
HNRNPC-227ENST00000556897 BOLA2Q9H3K6 86 aa10.86□□□□□ -0.67
HNRNPC-227ENST00000556897 PAG1Q9NWQ8 432 aa10.86□□□□□ -0.67
HNRNPC-227ENST00000556897 RIPK3Q9Y572 518 aa10.86□□□□□ -0.67
HNRNPC-227ENST00000556897 SYNGAP1Q96PV0 1343 aa10.85□□□□□ -0.67
HNRNPC-227ENST00000556897 DNAJC25-GNG10A0A024R161 153 aa10.85□□□□□ -0.67
HNRNPC-227ENST00000556897 ADCY6O43306 1168 aa10.85□□□□□ -0.67
HNRNPC-227ENST00000556897 DUSP11O75319 330 aaKnown RBP10.85□□□□□ -0.67
HNRNPC-227ENST00000556897 C6orf222P0C671 652 aaPredicted RBP10.85□□□□□ -0.67
HNRNPC-227ENST00000556897 CSF2RAP15509 400 aa10.85□□□□□ -0.67
HNRNPC-227ENST00000556897 SLC4A3P48751 1232 aa10.85□□□□□ -0.67
HNRNPC-227ENST00000556897 TMEM240Q5SV17 173 aa10.85□□□□□ -0.67
HNRNPC-227ENST00000556897 CTR9Q6PD62 1173 aa10.85□□□□□ -0.67
HNRNPC-227ENST00000556897 MAMDC4Q6UXC1 1216 aa10.85□□□□□ -0.67
HNRNPC-227ENST00000556897 CCDC129Q6ZRS4 1044 aa10.85□□□□□ -0.67
HNRNPC-227ENST00000556897 CPXCR1Q8N123 301 aa10.85□□□□□ -0.67
HNRNPC-227ENST00000556897 VTI1AQ96AJ9 217 aa10.85□□□□□ -0.67
HNRNPC-227ENST00000556897 SLF1Q9BQI6 1058 aa10.85□□□□□ -0.67
HNRNPC-227ENST00000556897 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.85□□□□□ -0.67
HNRNPC-227ENST00000556897 PRDM12Q9H4Q4 367 aa10.85□□□□□ -0.67
HNRNPC-227ENST00000556897 SLC4A4Q9Y6R1 1079 aa10.85□□□□□ -0.67
HNRNPC-227ENST00000556897 ELP1O95163 1332 aa10.84□□□□□ -0.67
HNRNPC-227ENST00000556897 MROH7Q68CQ1 1323 aa10.84□□□□□ -0.67
HNRNPC-227ENST00000556897 ASGR1P07306 291 aa10.84□□□□□ -0.67
HNRNPC-227ENST00000556897 ACRP10323 421 aa10.84□□□□□ -0.67
HNRNPC-227ENST00000556897 COL9A1P20849 921 aa10.84□□□□□ -0.67
HNRNPC-227ENST00000556897 CST5P28325 142 aaPredicted RBP10.84□□□□□ -0.67
HNRNPC-227ENST00000556897 CDK7P50613 346 aa10.84□□□□□ -0.67
HNRNPC-227ENST00000556897 PPIGQ13427 754 aaKnown RBP eCLIP10.84□□□□□ -0.671e-9■□□□□ 9.6
HNRNPC-227ENST00000556897 RASIP1Q5U651 963 aa10.84□□□□□ -0.67
HNRNPC-227ENST00000556897 CCDC174Q6PII3 467 aa10.84□□□□□ -0.67
HNRNPC-227ENST00000556897 ZNF365Q70YC5 407 aa10.84□□□□□ -0.67
HNRNPC-227ENST00000556897 PCSK9Q8NBP7 692 aaKnown RBP10.84□□□□□ -0.67
HNRNPC-227ENST00000556897 GAS2L1Q99501 681 aaPredicted RBP10.84□□□□□ -0.67
HNRNPC-227ENST00000556897 PPP1R12CQ9BZL4 782 aa10.84□□□□□ -0.67
HNRNPC-227ENST00000556897 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.84□□□□□ -0.67
HNRNPC-227ENST00000556897 ZBED9Q6R2W3 1325 aa10.84□□□□□ -0.67
HNRNPC-227ENST00000556897 F5H6K3 240 aa10.83□□□□□ -0.68
HNRNPC-227ENST00000556897 ARVCFO00192 962 aa10.83□□□□□ -0.68
HNRNPC-227ENST00000556897 NDUFB10O96000 172 aa10.83□□□□□ -0.68
HNRNPC-227ENST00000556897 ATP5JP18859 108 aa10.83□□□□□ -0.68
HNRNPC-227ENST00000556897 KLRC3Q07444 240 aa10.83□□□□□ -0.68
HNRNPC-227ENST00000556897 ACVR2BQ13705 512 aa10.83□□□□□ -0.68
HNRNPC-227ENST00000556897 UBE3CQ15386 1083 aa10.83□□□□□ -0.68
HNRNPC-227ENST00000556897 CCDC144BQ3MJ40 725 aa10.83□□□□□ -0.68
HNRNPC-227ENST00000556897 GNASQ5JWF2 1037 aa10.83□□□□□ -0.68
HNRNPC-227ENST00000556897 ZNF467Q7Z7K2 595 aaPredicted RBP10.83□□□□□ -0.68
HNRNPC-227ENST00000556897 FAM126BQ8IXS8 530 aa10.83□□□□□ -0.68
HNRNPC-227ENST00000556897 STK11IPQ8N1F8 1099 aa10.83□□□□□ -0.68
HNRNPC-227ENST00000556897 TMEM199Q8N511 208 aa10.83□□□□□ -0.68
HNRNPC-227ENST00000556897 PRPF38AQ8NAV1 312 aaKnown RBP10.83□□□□□ -0.68
HNRNPC-227ENST00000556897 ATXN2LQ8WWM7 1075 aaKnown RBP10.83□□□□□ -0.68
HNRNPC-227ENST00000556897 FGD4Q96M96 766 aa10.83□□□□□ -0.68
HNRNPC-227ENST00000556897 ASB2Q96Q27 587 aa10.83□□□□□ -0.68
HNRNPC-227ENST00000556897 HAUS7Q99871 368 aa10.83□□□□□ -0.68
HNRNPC-227ENST00000556897 PUS7LQ9H0K6 701 aaKnown RBP10.83□□□□□ -0.68
HNRNPC-227ENST00000556897 SPC25Q9HBM1 224 aa10.83□□□□□ -0.68
HNRNPC-227ENST00000556897 ARPP21Q9UBL0 812 aaPredicted RBP10.83□□□□□ -0.68
HNRNPC-227ENST00000556897 MCM3APO60318 1980 aa10.83□□□□□ -0.68
HNRNPC-227ENST00000556897 A0A0U1RQG5 324 aaPredicted RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms