RNA–Protein interactions for RNA: ENST00000556517.1

ABCD4-225, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 947 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-225ENST00000556517 MAP2K2P36507 400 aa14.53□□□□□ -0.08
ABCD4-225ENST00000556517 VEGFBP49765 207 aa14.53□□□□□ -0.08
ABCD4-225ENST00000556517 AKAP17AQ02040 695 aaKnown RBP14.53□□□□□ -0.08
ABCD4-225ENST00000556517 SCRN1Q12765 414 aa14.53□□□□□ -0.08
ABCD4-225ENST00000556517 MOGSQ13724 837 aa14.53□□□□□ -0.08
ABCD4-225ENST00000556517 COG2Q14746 738 aa14.53□□□□□ -0.08
ABCD4-225ENST00000556517 SYDE2Q5VT97 1194 aa14.53□□□□□ -0.08
ABCD4-225ENST00000556517 CATSPERGQ6ZRH7 1159 aa14.53□□□□□ -0.08
ABCD4-225ENST00000556517 TMTC3Q6ZXV5 915 aa14.53□□□□□ -0.08
ABCD4-225ENST00000556517 TRIM22Q8IYM9 498 aa14.53□□□□□ -0.08
ABCD4-225ENST00000556517 STAG2Q8N3U4 1231 aa14.53□□□□□ -0.08
ABCD4-225ENST00000556517 TMX3Q96JJ7 454 aa14.53□□□□□ -0.08
ABCD4-225ENST00000556517 ASCC2Q9H1I8 757 aaPredicted RBP14.53□□□□□ -0.08
ABCD4-225ENST00000556517 RBM27Q9P2N5 1060 aaKnown RBP14.53□□□□□ -0.08
ABCD4-225ENST00000556517 AOC2O75106 756 aa14.52□□□□□ -0.09
ABCD4-225ENST00000556517 PLEKHA8P1O95397 391 aa14.52□□□□□ -0.09
ABCD4-225ENST00000556517 ALDH1A1P00352 501 aa14.52□□□□□ -0.09
ABCD4-225ENST00000556517 FDX1P10109 184 aa14.52□□□□□ -0.09
ABCD4-225ENST00000556517 SMARCA1P28370 1054 aa14.52□□□□□ -0.09
ABCD4-225ENST00000556517 CDC27P30260 824 aa14.52□□□□□ -0.09
ABCD4-225ENST00000556517 ADD1P35611 737 aaKnown RBP14.52□□□□□ -0.09
ABCD4-225ENST00000556517 SLC16A2P36021 539 aa14.52□□□□□ -0.09
ABCD4-225ENST00000556517 GPAT2Q6NUI2 795 aa14.52□□□□□ -0.09
ABCD4-225ENST00000556517 IFNL1Q8IU54 200 aa14.52□□□□□ -0.09
ABCD4-225ENST00000556517 CCDC83Q8IWF9 413 aa14.52□□□□□ -0.09
ABCD4-225ENST00000556517 CCDC82Q8N4S0 544 aa14.52□□□□□ -0.09
ABCD4-225ENST00000556517 NECAB1Q8N987 351 aa14.52□□□□□ -0.09
ABCD4-225ENST00000556517 GTF3C2Q8WUA4 911 aaPredicted RBP14.52□□□□□ -0.09
ABCD4-225ENST00000556517 RRP36Q96EU6 259 aaKnown RBP14.52□□□□□ -0.09
ABCD4-225ENST00000556517 SPZ1Q9BXG8 430 aa14.52□□□□□ -0.09
ABCD4-225ENST00000556517 UBA5Q9GZZ9 404 aa14.52□□□□□ -0.09
ABCD4-225ENST00000556517 DAXXQ9UER7 740 aaPredicted RBP14.52□□□□□ -0.09
ABCD4-225ENST00000556517 PPP1R9AQ9ULJ8 1098 aa14.52□□□□□ -0.09
ABCD4-225ENST00000556517 ZBED4O75132 1171 aa14.51□□□□□ -0.09
ABCD4-225ENST00000556517 LARGE1O95461 756 aa14.51□□□□□ -0.09
ABCD4-225ENST00000556517 TM4SF4P48230 202 aa14.51□□□□□ -0.09
ABCD4-225ENST00000556517 TTBK2Q6IQ55 1244 aa14.51□□□□□ -0.09
ABCD4-225ENST00000556517 BTNL9Q6UXG8 535 aa14.51□□□□□ -0.09
ABCD4-225ENST00000556517 ADGRF4Q8IZF3 695 aa14.51□□□□□ -0.09
ABCD4-225ENST00000556517 FAM43AQ8N2R8 423 aa14.51□□□□□ -0.09
ABCD4-225ENST00000556517 MB21D1Q8N884 522 aa14.51□□□□□ -0.09
ABCD4-225ENST00000556517 LLPHQ9BRT6 129 aaKnown RBP14.51□□□□□ -0.09
ABCD4-225ENST00000556517 VAT1LQ9HCJ6 419 aa14.51□□□□□ -0.09
ABCD4-225ENST00000556517 TSHZ2Q9NRE2 1034 aa14.51□□□□□ -0.09
ABCD4-225ENST00000556517 FBXO28Q9NVF7 368 aa14.51□□□□□ -0.09
ABCD4-225ENST00000556517 PRR12Q9ULL5 1215 aa14.51□□□□□ -0.09
ABCD4-225ENST00000556517 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.51□□□□□ -0.09
ABCD4-225ENST00000556517 IGF2BP3O00425 579 aaKnown RBP eCLIP14.5□□□□□ -0.09
ABCD4-225ENST00000556517 IFNAR1P17181 557 aa14.5□□□□□ -0.09
ABCD4-225ENST00000556517 DSG3P32926 999 aa14.5□□□□□ -0.09
ABCD4-225ENST00000556517 HERVK_113P62684 666 aa14.5□□□□□ -0.09
ABCD4-225ENST00000556517 SSRP1Q08945 709 aaKnown RBP14.5□□□□□ -0.09
ABCD4-225ENST00000556517 TRAF1Q13077 416 aa14.5□□□□□ -0.09
ABCD4-225ENST00000556517 TAF1CQ15572 869 aaPredicted RBP14.5□□□□□ -0.09
ABCD4-225ENST00000556517 HOMER1Q86YM7 354 aa14.5□□□□□ -0.09
ABCD4-225ENST00000556517 CMTR1Q8N1G2 835 aaKnown RBP14.5□□□□□ -0.09
ABCD4-225ENST00000556517 SRBD1Q8N5C6 995 aaKnown RBP14.5□□□□□ -0.09
ABCD4-225ENST00000556517 PTPN18Q99952 460 aa14.5□□□□□ -0.09
ABCD4-225ENST00000556517 FAM217BQ9NTX9 383 aaPredicted RBP14.5□□□□□ -0.09
ABCD4-225ENST00000556517 PNMA2Q9UL42 364 aa14.5□□□□□ -0.09
ABCD4-225ENST00000556517 KIF3AQ9Y496 699 aa14.5□□□□□ -0.09
ABCD4-225ENST00000556517 PTPRFP10586 1907 aa14.5□□□□□ -0.09
ABCD4-225ENST00000556517 CNTNAP5Q8WYK1 1306 aa14.49□□□□□ -0.09
ABCD4-225ENST00000556517 SPDYE16A6NNV3 312 aaPredicted RBP14.49□□□□□ -0.09
ABCD4-225ENST00000556517 VWA5AO00534 786 aa14.49□□□□□ -0.09
ABCD4-225ENST00000556517 CYP2C8P10632 490 aa14.49□□□□□ -0.09
ABCD4-225ENST00000556517 GCLCP48506 637 aaPredicted RBP14.49□□□□□ -0.09
ABCD4-225ENST00000556517 HMGN5P82970 282 aaKnown RBP14.49□□□□□ -0.09
ABCD4-225ENST00000556517 CDC37Q16543 378 aaPredicted RBP14.49□□□□□ -0.09
ABCD4-225ENST00000556517 PIBF1Q8WXW3 757 aa14.49□□□□□ -0.09
ABCD4-225ENST00000556517 WASF1Q92558 559 aa14.49□□□□□ -0.09
ABCD4-225ENST00000556517 PHKBQ93100 1093 aa14.49□□□□□ -0.09
ABCD4-225ENST00000556517 ATG4CQ96DT6 458 aa14.49□□□□□ -0.09
ABCD4-225ENST00000556517 BEGAINQ9BUH8 593 aa14.49□□□□□ -0.09
ABCD4-225ENST00000556517 SLC26A6Q9BXS9 759 aa14.49□□□□□ -0.09
ABCD4-225ENST00000556517 RNF26Q9BY78 433 aaPredicted RBP14.49□□□□□ -0.09
ABCD4-225ENST00000556517 CPVLQ9H3G5 476 aa14.49□□□□□ -0.09
ABCD4-225ENST00000556517 RIOX1Q9H6W3 641 aa14.49□□□□□ -0.09
ABCD4-225ENST00000556517 ZFYVE28Q9HCC9 887 aa14.49□□□□□ -0.09
ABCD4-225ENST00000556517 PTPDC1A2A3K4 754 aa14.48□□□□□ -0.09
ABCD4-225ENST00000556517 ZBTB5O15062 677 aa14.48□□□□□ -0.09
ABCD4-225ENST00000556517 FMNL1O95466 1100 aaPredicted RBP14.48□□□□□ -0.09
ABCD4-225ENST00000556517 OAZ1P54368 228 aa14.48□□□□□ -0.09
ABCD4-225ENST00000556517 PLS1Q14651 629 aa14.48□□□□□ -0.09
ABCD4-225ENST00000556517 LBX2Q6XYB7 198 aa14.48□□□□□ -0.09
ABCD4-225ENST00000556517 NBPF11Q86T75 865 aa14.48□□□□□ -0.09
ABCD4-225ENST00000556517 ZIC5Q96T25 663 aa14.48□□□□□ -0.09
ABCD4-225ENST00000556517 P2RX7Q99572 595 aaKnown RBP14.48□□□□□ -0.09
ABCD4-225ENST00000556517 PAGR1Q9BTK6 254 aa14.48□□□□□ -0.09
ABCD4-225ENST00000556517 JMJD4Q9H9V9 463 aa14.48□□□□□ -0.09
ABCD4-225ENST00000556517 RBM19Q9Y4C8 960 aaKnown RBP14.48□□□□□ -0.09
ABCD4-225ENST00000556517 STK36Q9NRP7 1315 aa14.47□□□□□ -0.09
ABCD4-225ENST00000556517 PNMA6FA0A0J9YX94 578 aa14.47□□□□□ -0.09
ABCD4-225ENST00000556517 CYTH3O43739 400 aa14.47□□□□□ -0.09
ABCD4-225ENST00000556517 DEXIO95424 95 aa14.47□□□□□ -0.09
ABCD4-225ENST00000556517 MAP2K1Q02750 393 aaPredicted RBP14.47□□□□□ -0.09
ABCD4-225ENST00000556517 NTRK3Q16288 839 aa14.47□□□□□ -0.09
ABCD4-225ENST00000556517 CCDC174Q6PII3 467 aa14.47□□□□□ -0.09
ABCD4-225ENST00000556517 CCAR1Q8IX12 1150 aaKnown RBP14.47□□□□□ -0.09
ABCD4-225ENST00000556517 FAM184AQ8NB25 1140 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms