RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 TRIM47Q96LD4 638 aa11.4□□□□□ -0.58
SRP54-210ENST00000556380 MCOLN1Q9GZU1 580 aa11.4□□□□□ -0.58
SRP54-210ENST00000556380 GOPCQ9HD26 462 aa11.4□□□□□ -0.58
SRP54-210ENST00000556380 ADAMTS5Q9UNA0 930 aa11.4□□□□□ -0.58
SRP54-210ENST00000556380 MYH8P13535 1937 aa11.39□□□□□ -0.59
SRP54-210ENST00000556380 SPDYE16A6NNV3 312 aaPredicted RBP11.39□□□□□ -0.59
SRP54-210ENST00000556380 B4E1Z4 1266 aa11.39□□□□□ -0.59
SRP54-210ENST00000556380 PSMC4P43686 418 aa11.39□□□□□ -0.59
SRP54-210ENST00000556380 PKN2Q16513 984 aaKnown RBP11.39□□□□□ -0.59
SRP54-210ENST00000556380 KIAA1211Q6ZU35 1233 aa11.39□□□□□ -0.59
SRP54-210ENST00000556380 STOX1Q6ZVD7 989 aa11.39□□□□□ -0.59
SRP54-210ENST00000556380 LRRC47Q8N1G4 583 aaKnown RBP11.39□□□□□ -0.59
SRP54-210ENST00000556380 GTF3C2Q8WUA4 911 aaPredicted RBP11.39□□□□□ -0.59
SRP54-210ENST00000556380 ESR2Q92731 530 aa11.39□□□□□ -0.59
SRP54-210ENST00000556380 TTC14Q96N46 770 aa11.39□□□□□ -0.59
SRP54-210ENST00000556380 NUP88Q99567 741 aaPredicted RBP11.39□□□□□ -0.59
SRP54-210ENST00000556380 EFCC1Q9HA90 598 aa11.39□□□□□ -0.59
SRP54-210ENST00000556380 TOMM22Q9NS69 142 aa11.39□□□□□ -0.59
SRP54-210ENST00000556380 FBXO28Q9NVF7 368 aa11.39□□□□□ -0.59
SRP54-210ENST00000556380 HOXC10Q9NYD6 342 aa11.39□□□□□ -0.59
SRP54-210ENST00000556380 ZSWIM5Q9P217 1185 aa11.39□□□□□ -0.59
SRP54-210ENST00000556380 RABGAP1Q9Y3P9 1069 aa11.39□□□□□ -0.59
SRP54-210ENST00000556380 MYPNQ86TC9 1320 aa11.38□□□□□ -0.59
SRP54-210ENST00000556380 E7EWF7 191 aa11.38□□□□□ -0.59
SRP54-210ENST00000556380 KDM4AO75164 1064 aa11.38□□□□□ -0.59
SRP54-210ENST00000556380 TOP1P11387 765 aaKnown RBP11.38□□□□□ -0.59
SRP54-210ENST00000556380 FAM83BQ5T0W9 1011 aa11.38□□□□□ -0.59
SRP54-210ENST00000556380 SLFN13Q68D06 897 aa11.38□□□□□ -0.59
SRP54-210ENST00000556380 CYB5R4Q7L1T6 521 aa11.38□□□□□ -0.59
SRP54-210ENST00000556380 DGKHQ86XP1 1220 aa11.38□□□□□ -0.59
SRP54-210ENST00000556380 TNS4Q8IZW8 715 aa11.38□□□□□ -0.59
SRP54-210ENST00000556380 ZNF454Q8N9F8 522 aa11.38□□□□□ -0.59
SRP54-210ENST00000556380 GPRC5AQ8NFJ5 357 aa11.38□□□□□ -0.59
SRP54-210ENST00000556380 GMCL1Q96IK5 515 aa11.38□□□□□ -0.59
SRP54-210ENST00000556380 TMEM47Q9BQJ4 181 aa11.38□□□□□ -0.59
SRP54-210ENST00000556380 KRT23Q9C075 422 aa11.38□□□□□ -0.59
SRP54-210ENST00000556380 TANGO6Q9C0B7 1094 aa11.38□□□□□ -0.59
SRP54-210ENST00000556380 CNNM2Q9H8M5 875 aa11.38□□□□□ -0.59
SRP54-210ENST00000556380 ANO2Q9NQ90 1003 aa11.38□□□□□ -0.59
SRP54-210ENST00000556380 BTBD7Q9P203 1132 aa11.38□□□□□ -0.59
SRP54-210ENST00000556380 STX8Q9UNK0 236 aa11.38□□□□□ -0.59
SRP54-210ENST00000556380 TRIM17Q9Y577 477 aa11.38□□□□□ -0.59
SRP54-210ENST00000556380 RLFQ13129 1914 aa11.37□□□□□ -0.59
SRP54-210ENST00000556380 SLC27A2O14975 620 aa11.37□□□□□ -0.59
SRP54-210ENST00000556380 GNRH1P01148 92 aa11.37□□□□□ -0.59
SRP54-210ENST00000556380 ERVK-9P63128 1117 aa11.37□□□□□ -0.59
SRP54-210ENST00000556380 ERVK-24P63145 666 aa11.37□□□□□ -0.59
SRP54-210ENST00000556380 COL9A3Q14050 684 aaPredicted RBP11.37□□□□□ -0.59
SRP54-210ENST00000556380 KIF22Q14807 665 aa11.37□□□□□ -0.59
SRP54-210ENST00000556380 CREB3L3Q68CJ9 461 aa11.37□□□□□ -0.59
SRP54-210ENST00000556380 FBXO46Q6PJ61 603 aaPredicted RBP11.37□□□□□ -0.59
SRP54-210ENST00000556380 CASC1Q6TDU7 716 aa11.37□□□□□ -0.59
SRP54-210ENST00000556380 REPS2Q8NFH8 660 aa11.37□□□□□ -0.59
SRP54-210ENST00000556380 KCNK17Q96T54 332 aa11.37□□□□□ -0.59
SRP54-210ENST00000556380 PPP1R9AQ9ULJ8 1098 aa11.37□□□□□ -0.59
SRP54-210ENST00000556380 PTPN22Q9Y2R2 807 aa11.37□□□□□ -0.59
SRP54-210ENST00000556380 TK2O00142 265 aa11.36□□□□□ -0.59
SRP54-210ENST00000556380 EVI5O60447 810 aa11.36□□□□□ -0.59
SRP54-210ENST00000556380 PLA2G6O60733 806 aa11.36□□□□□ -0.59
SRP54-210ENST00000556380 FLOT1O75955 427 aa11.36□□□□□ -0.59
SRP54-210ENST00000556380 FMNL1O95466 1100 aaPredicted RBP11.36□□□□□ -0.59
SRP54-210ENST00000556380 BMP3P12645 472 aa11.36□□□□□ -0.59
SRP54-210ENST00000556380 MCCP23508 829 aa11.36□□□□□ -0.59
SRP54-210ENST00000556380 FCGRTP55899 365 aa11.36□□□□□ -0.59
SRP54-210ENST00000556380 ARHGEF6Q15052 776 aa11.36□□□□□ -0.59
SRP54-210ENST00000556380 SEC23AQ15436 765 aa11.36□□□□□ -0.59
SRP54-210ENST00000556380 TSGA10IPQ3SY00 556 aa11.36□□□□□ -0.59
SRP54-210ENST00000556380 CCDC178Q5BJE1 867 aa11.36□□□□□ -0.59
SRP54-210ENST00000556380 MB21D2Q8IYB1 491 aaPredicted RBP11.36□□□□□ -0.59
SRP54-210ENST00000556380 ENAHQ8N8S7 591 aaPredicted RBP11.36□□□□□ -0.59
SRP54-210ENST00000556380 BBXQ8WY36 941 aaPredicted RBP11.36□□□□□ -0.59
SRP54-210ENST00000556380 KCNB2Q92953 911 aa11.36□□□□□ -0.59
SRP54-210ENST00000556380 ATG4CQ96DT6 458 aa11.36□□□□□ -0.59
SRP54-210ENST00000556380 ZSCAN10Q96SZ4 725 aaPredicted RBP11.36□□□□□ -0.59
SRP54-210ENST00000556380 ZKSCAN3Q9BRR0 538 aa11.36□□□□□ -0.59
SRP54-210ENST00000556380 PORCNQ9H237 461 aa11.36□□□□□ -0.59
SRP54-210ENST00000556380 SRRDQ9UH36 339 aa11.36□□□□□ -0.59
SRP54-210ENST00000556380 GJD2Q9UKL4 321 aa11.36□□□□□ -0.59
SRP54-210ENST00000556380 LAMA4Q16363 1823 aa11.36□□□□□ -0.59
SRP54-210ENST00000556380 VWA5AO00534 786 aa11.35□□□□□ -0.59
SRP54-210ENST00000556380 SNHG28P0DPA3 235 aa11.35□□□□□ -0.59
SRP54-210ENST00000556380 PRMT2P55345 433 aa11.35□□□□□ -0.59
SRP54-210ENST00000556380 ANTXR2P58335 489 aa11.35□□□□□ -0.59
SRP54-210ENST00000556380 TMEM132BQ14DG7 1078 aa11.35□□□□□ -0.59
SRP54-210ENST00000556380 RASGRP2Q7LDG7 609 aa11.35□□□□□ -0.59
SRP54-210ENST00000556380 IQCA1Q86XH1 822 aa11.35□□□□□ -0.59
SRP54-210ENST00000556380 MB21D1Q8N884 522 aa11.35□□□□□ -0.59
SRP54-210ENST00000556380 PRPF38AQ8NAV1 312 aaKnown RBP11.35□□□□□ -0.59
SRP54-210ENST00000556380 ABHD8Q96I13 439 aa11.35□□□□□ -0.59
SRP54-210ENST00000556380 SLF1Q9BQI6 1058 aa11.35□□□□□ -0.59
SRP54-210ENST00000556380 PAGR1Q9BTK6 254 aa11.35□□□□□ -0.59
SRP54-210ENST00000556380 GABRQQ9UN88 632 aa11.35□□□□□ -0.59
SRP54-210ENST00000556380 HPS5Q9UPZ3 1129 aa11.35□□□□□ -0.59
SRP54-210ENST00000556380 RAD21O60216 631 aa11.34□□□□□ -0.59
SRP54-210ENST00000556380 HOXD10P28358 340 aa11.34□□□□□ -0.59
SRP54-210ENST00000556380 SLC1A4P43007 532 aa11.34□□□□□ -0.59
SRP54-210ENST00000556380 PRKCZQ05513 592 aa11.34□□□□□ -0.59
SRP54-210ENST00000556380 TRDNQ13061 729 aa11.34□□□□□ -0.59
SRP54-210ENST00000556380 BTNL9Q6UXG8 535 aa11.34□□□□□ -0.59
SRP54-210ENST00000556380 NCOA7Q8NI08 942 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms