RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 TMEM130Q8N3G9 435 aa6.37□□□□□ -1.39
ATXN3-239ENST00000556315 PLD4Q96BZ4 506 aa6.37□□□□□ -1.39
ATXN3-239ENST00000556315 MIS18AQ9NYP9 233 aa6.37□□□□□ -1.39
ATXN3-239ENST00000556315 RNF112Q9ULX5 631 aa6.37□□□□□ -1.39
ATXN3-239ENST00000556315 LTBP1Q14766 1721 aa6.36□□□□□ -1.39
ATXN3-239ENST00000556315 ADM5C9JUS6 153 aa6.36□□□□□ -1.39
ATXN3-239ENST00000556315 J3QW42 95 aa6.36□□□□□ -1.39
ATXN3-239ENST00000556315 PSAPP07602 524 aa6.36□□□□□ -1.39
ATXN3-239ENST00000556315 MYL6BP14649 208 aa6.36□□□□□ -1.39
ATXN3-239ENST00000556315 GRAPQ13588 217 aa6.36□□□□□ -1.39
ATXN3-239ENST00000556315 DCTN1Q14203 1278 aa6.36□□□□□ -1.39
ATXN3-239ENST00000556315 FBXO46Q6PJ61 603 aaPredicted RBP6.36□□□□□ -1.39
ATXN3-239ENST00000556315 PRR23CQ6ZRP0 262 aa6.36□□□□□ -1.39
ATXN3-239ENST00000556315 RGL4Q8IZJ4 473 aa6.36□□□□□ -1.39
ATXN3-239ENST00000556315 CMTR1Q8N1G2 835 aaKnown RBP6.36□□□□□ -1.39
ATXN3-239ENST00000556315 GRAPLQ8TC17 118 aaPredicted RBP6.36□□□□□ -1.39
ATXN3-239ENST00000556315 ZNF296Q8WUU4 475 aaPredicted RBP6.36□□□□□ -1.39
ATXN3-239ENST00000556315 CFAP53Q96M91 514 aa6.36□□□□□ -1.39
ATXN3-239ENST00000556315 SAP130Q9H0E3 1048 aa6.36□□□□□ -1.39
ATXN3-239ENST00000556315 SRA1Q9HD15 236 aaKnown RBP6.36□□□□□ -1.39
ATXN3-239ENST00000556315 STIM2Q9P246 746 aa6.36□□□□□ -1.39
ATXN3-239ENST00000556315 SCN7AQ01118 1682 aa6.36□□□□□ -1.39
ATXN3-239ENST00000556315 SOWAHDA6NJG2 315 aa6.35□□□□□ -1.39
ATXN3-239ENST00000556315 H3BRB1 525 aa6.35□□□□□ -1.39
ATXN3-239ENST00000556315 ICMTO60725 284 aa6.35□□□□□ -1.39
ATXN3-239ENST00000556315 FAM13AO94988 1023 aa6.35□□□□□ -1.39
ATXN3-239ENST00000556315 TBC1D8O95759 1140 aa6.35□□□□□ -1.39
ATXN3-239ENST00000556315 U2AF1L5P0DN76 240 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-239ENST00000556315 TM4SF4P48230 202 aa6.35□□□□□ -1.39
ATXN3-239ENST00000556315 EIF4A1P60842 406 aaKnown RBP6.35□□□□□ -1.39
ATXN3-239ENST00000556315 U2AF1Q01081 240 aaKnown RBP eCLIP6.35□□□□□ -1.39
ATXN3-239ENST00000556315 TRIM26Q12899 539 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-239ENST00000556315 ZNF211Q13398 564 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-239ENST00000556315 HSP90AB3PQ58FF7 597 aa6.35□□□□□ -1.39
ATXN3-239ENST00000556315 INTS3Q68E01 1043 aaKnown RBP6.35□□□□□ -1.39
ATXN3-239ENST00000556315 RASAL3Q86YV0 1011 aa6.35□□□□□ -1.39
ATXN3-239ENST00000556315 GLYCTKQ8IVS8 523 aa6.35□□□□□ -1.39
ATXN3-239ENST00000556315 CDCA5Q96FF9 252 aa6.35□□□□□ -1.39
ATXN3-239ENST00000556315 MRPL18Q9H0U6 180 aaKnown RBP6.35□□□□□ -1.39
ATXN3-239ENST00000556315 TUT1Q9H6E5 874 aaKnown RBP6.35□□□□□ -1.39
ATXN3-239ENST00000556315 AKTIPQ9H8T0 292 aa6.35□□□□□ -1.39
ATXN3-239ENST00000556315 CASP8AP2Q9UKL3 1982 aa6.35□□□□□ -1.39
ATXN3-239ENST00000556315 PDE4DIPQ5VU43 2346 aa6.34□□□□□ -1.39
ATXN3-239ENST00000556315 UBR2Q8IWV8 1755 aa6.34□□□□□ -1.39
ATXN3-239ENST00000556315 CLSPNQ9HAW4 1339 aa6.34□□□□□ -1.39
ATXN3-239ENST00000556315 TNFRSF10BO14763 440 aa6.34□□□□□ -1.39
ATXN3-239ENST00000556315 FKTNO75072 461 aa6.34□□□□□ -1.39
ATXN3-239ENST00000556315 VIL1P09327 827 aaKnown RBP6.34□□□□□ -1.39
ATXN3-239ENST00000556315 HCLS1P14317 486 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-239ENST00000556315 KIF4BQ2VIQ3 1234 aa6.34□□□□□ -1.39
ATXN3-239ENST00000556315 ALKBH2Q6NS38 261 aa6.34□□□□□ -1.39
ATXN3-239ENST00000556315 Q6ZS46 218 aa6.34□□□□□ -1.39
ATXN3-239ENST00000556315 MAP4K3Q8IVH8 894 aa6.34□□□□□ -1.39
ATXN3-239ENST00000556315 ETFBKMTQ8IXQ9 262 aa6.34□□□□□ -1.39
ATXN3-239ENST00000556315 CACTIN-AS1Q8N1I8 211 aa6.34□□□□□ -1.39
ATXN3-239ENST00000556315 EYA3Q99504 573 aa6.34□□□□□ -1.39
ATXN3-239ENST00000556315 GZF1Q9H116 711 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-239ENST00000556315 DBNDD1Q9H9R9 158 aa6.34□□□□□ -1.39
ATXN3-239ENST00000556315 KCNQ5Q9NR82 932 aa6.34□□□□□ -1.39
ATXN3-239ENST00000556315 F8W735 103 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-239ENST00000556315 UBE2Q2LH0YL09 131 aa6.33□□□□□ -1.4
ATXN3-239ENST00000556315 ECE2O60344 883 aa6.33□□□□□ -1.4
ATXN3-239ENST00000556315 GHRHP01286 108 aa6.33□□□□□ -1.4
ATXN3-239ENST00000556315 NPR3P17342 541 aa6.33□□□□□ -1.4
ATXN3-239ENST00000556315 ZNF280AP59817 542 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-239ENST00000556315 TCIRG1Q13488 830 aa6.33□□□□□ -1.4
ATXN3-239ENST00000556315 CNGB1Q14028 1251 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-239ENST00000556315 SETDB1Q15047 1291 aa6.33□□□□□ -1.4
ATXN3-239ENST00000556315 TRIP4Q15650 581 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-239ENST00000556315 ANGEL2Q5VTE6 544 aaKnown RBP6.33□□□□□ -1.4
ATXN3-239ENST00000556315 SND1Q7KZF4 910 aaKnown RBP eCLIP6.33□□□□□ -1.4
ATXN3-239ENST00000556315 NLRP10Q86W26 655 aa6.33□□□□□ -1.4
ATXN3-239ENST00000556315 IL22RA1Q8N6P7 574 aa6.33□□□□□ -1.4
ATXN3-239ENST00000556315 AGBL3Q8NEM8 1001 aa6.33□□□□□ -1.4
ATXN3-239ENST00000556315 NSUN5Q96P11 429 aaKnown RBP6.33□□□□□ -1.4
ATXN3-239ENST00000556315 KRTAP4-12Q9BQ66 201 aa6.33□□□□□ -1.4
ATXN3-239ENST00000556315 ZC3H12CQ9C0D7 883 aaKnown RBP6.33□□□□□ -1.4
ATXN3-239ENST00000556315 ANO2Q9NQ90 1003 aa6.33□□□□□ -1.4
ATXN3-239ENST00000556315 GGA3Q9NZ52 723 aa6.33□□□□□ -1.4
ATXN3-239ENST00000556315 POLLQ9UGP5 575 aa6.33□□□□□ -1.4
ATXN3-239ENST00000556315 TRMT112Q9UI30 125 aaKnown RBP6.33□□□□□ -1.4
ATXN3-239ENST00000556315 ARFGEF2Q9Y6D5 1785 aa6.33□□□□□ -1.4
ATXN3-239ENST00000556315 ASTN2O75129 1339 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-239ENST00000556315 SH3TC1Q8TE82 1336 aa6.32□□□□□ -1.4
ATXN3-239ENST00000556315 ALX3O95076 343 aa6.32□□□□□ -1.4
ATXN3-239ENST00000556315 NEFMP07197 916 aa6.32□□□□□ -1.4
ATXN3-239ENST00000556315 MPSTP25325 297 aa6.32□□□□□ -1.4
ATXN3-239ENST00000556315 FXR1P51114 621 aaKnown RBP eCLIP6.32□□□□□ -1.4
ATXN3-239ENST00000556315 INHBEP58166 350 aa6.32□□□□□ -1.4
ATXN3-239ENST00000556315 GPSM2P81274 684 aa6.32□□□□□ -1.4
ATXN3-239ENST00000556315 SREBF2Q12772 1141 aa6.32□□□□□ -1.4
ATXN3-239ENST00000556315 MTMR3Q13615 1198 aa6.32□□□□□ -1.4
ATXN3-239ENST00000556315 SF3B3Q15393 1217 aaKnown RBP6.32□□□□□ -1.4
ATXN3-239ENST00000556315 FAM26DQ5JW98 314 aa6.32□□□□□ -1.4
ATXN3-239ENST00000556315 GDF6Q6KF10 455 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-239ENST00000556315 LRP10Q7Z4F1 713 aa6.32□□□□□ -1.4
ATXN3-239ENST00000556315 TBC1D16Q8TBP0 767 aa6.32□□□□□ -1.4
ATXN3-239ENST00000556315 THUMPD2Q9BTF0 503 aaKnown RBP6.32□□□□□ -1.4
ATXN3-239ENST00000556315 RBSNQ9H1K0 784 aa6.32□□□□□ -1.4
ATXN3-239ENST00000556315 FAM13BQ9NYF5 915 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms