RNA–Protein interactions for RNA: ENST00000556217.5

SUPT16H-205, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 1,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-205ENST00000556217 ZNF865P0CJ78 1059 aaPredicted RBP18.51■□□□□ 0.55
SUPT16H-205ENST00000556217 TAL1P17542 331 aaPredicted RBP18.51■□□□□ 0.55
SUPT16H-205ENST00000556217 REPS2Q8NFH8 660 aa18.51■□□□□ 0.55
SUPT16H-205ENST00000556217 NUP133Q8WUM0 1156 aa18.51■□□□□ 0.55
SUPT16H-205ENST00000556217 TMEM39AQ9NV64 488 aa18.51■□□□□ 0.55
SUPT16H-205ENST00000556217 COG6Q9Y2V7 657 aa18.51■□□□□ 0.55
SUPT16H-205ENST00000556217 PLA2G5P39877 138 aa18.5■□□□□ 0.55
SUPT16H-205ENST00000556217 FPGSQ05932 587 aa18.5■□□□□ 0.55
SUPT16H-205ENST00000556217 FAM122AQ96E09 287 aa18.5■□□□□ 0.55
SUPT16H-205ENST00000556217 DDX11Q96FC9 970 aa18.5■□□□□ 0.55
SUPT16H-205ENST00000556217 TOX2Q96NM4 488 aa18.5■□□□□ 0.55
SUPT16H-205ENST00000556217 LRRCC1Q9C099 1032 aa18.5■□□□□ 0.55
SUPT16H-205ENST00000556217 PUS7LQ9H0K6 701 aaKnown RBP18.5■□□□□ 0.55
SUPT16H-205ENST00000556217 MKNK2Q9HBH9 465 aa18.5■□□□□ 0.55
SUPT16H-205ENST00000556217 RAPGEFL1Q9UHV5 662 aa18.5■□□□□ 0.55
SUPT16H-205ENST00000556217 FAM184BQ9ULE4 1060 aa18.5■□□□□ 0.55
SUPT16H-205ENST00000556217 CTDP1Q9Y5B0 961 aaPredicted RBP18.5■□□□□ 0.55
SUPT16H-205ENST00000556217 SYNGAP1Q96PV0 1343 aa18.49■□□□□ 0.55
SUPT16H-205ENST00000556217 MYH4Q9Y623 1939 aa18.49■□□□□ 0.55
SUPT16H-205ENST00000556217 DCDC2CA8MYV0 355 aa18.49■□□□□ 0.55
SUPT16H-205ENST00000556217 SBK1Q52WX2 424 aa18.49■□□□□ 0.55
SUPT16H-205ENST00000556217 SNRNP48Q6IEG0 339 aaKnown RBP18.49■□□□□ 0.55
SUPT16H-205ENST00000556217 PRPF38AQ8NAV1 312 aaKnown RBP18.49■□□□□ 0.55
SUPT16H-205ENST00000556217 STARD7Q9NQZ5 370 aa18.49■□□□□ 0.55
SUPT16H-205ENST00000556217 NYAP2Q9P242 653 aa18.49■□□□□ 0.55
SUPT16H-205ENST00000556217 MOXD2PA6NHM9 499 aa18.48■□□□□ 0.55
SUPT16H-205ENST00000556217 ZBED4O75132 1171 aa18.48■□□□□ 0.55
SUPT16H-205ENST00000556217 ADAMTS4O75173 837 aa18.48■□□□□ 0.55
SUPT16H-205ENST00000556217 CHGBP05060 677 aa18.48■□□□□ 0.55
SUPT16H-205ENST00000556217 ITGB8P26012 769 aa18.48■□□□□ 0.55
SUPT16H-205ENST00000556217 ACLYP53396 1101 aa18.48■□□□□ 0.55
SUPT16H-205ENST00000556217 GIMAP6Q6P9H5 292 aa18.48■□□□□ 0.55
SUPT16H-205ENST00000556217 ANKRD33Q7Z3H0 272 aa18.48■□□□□ 0.55
SUPT16H-205ENST00000556217 USP38Q8NB14 1042 aa18.48■□□□□ 0.55
SUPT16H-205ENST00000556217 LENG1Q96BZ8 264 aaPredicted RBP18.48■□□□□ 0.55
SUPT16H-205ENST00000556217 NUP88Q99567 741 aaPredicted RBP18.48■□□□□ 0.55
SUPT16H-205ENST00000556217 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.48■□□□□ 0.55
SUPT16H-205ENST00000556217 ZNF287Q9HBT7 754 aa18.48■□□□□ 0.55
SUPT16H-205ENST00000556217 SYNRGQ9UMZ2 1314 aa18.48■□□□□ 0.55
SUPT16H-205ENST00000556217 BDP1A6H8Y1 2624 aa18.47■□□□□ 0.55
SUPT16H-205ENST00000556217 MYO9BQ13459 2157 aa18.47■□□□□ 0.55
SUPT16H-205ENST00000556217 F5H6K3 240 aa18.47■□□□□ 0.55
SUPT16H-205ENST00000556217 KLRC3Q07444 240 aa18.47■□□□□ 0.55
SUPT16H-205ENST00000556217 GRIN2CQ14957 1233 aa18.47■□□□□ 0.55
SUPT16H-205ENST00000556217 MAMDC4Q6UXC1 1216 aa18.47■□□□□ 0.55
SUPT16H-205ENST00000556217 ZNF467Q7Z7K2 595 aaPredicted RBP18.47■□□□□ 0.55
SUPT16H-205ENST00000556217 STRBPQ96SI9 672 aaKnown RBP18.47■□□□□ 0.55
SUPT16H-205ENST00000556217 ZHX1Q9UKY1 873 aaPredicted RBP18.47■□□□□ 0.55
SUPT16H-205ENST00000556217 MROH7Q68CQ1 1323 aa18.47■□□□□ 0.55
SUPT16H-205ENST00000556217 MINDY4BA8MYZ0 360 aa18.46■□□□□ 0.55
SUPT16H-205ENST00000556217 ATP2A1O14983 1001 aa18.46■□□□□ 0.55
SUPT16H-205ENST00000556217 DUSP11O75319 330 aaKnown RBP18.46■□□□□ 0.55
SUPT16H-205ENST00000556217 NDUFB10O96000 172 aa18.46■□□□□ 0.55
SUPT16H-205ENST00000556217 RASA1P20936 1047 aa18.46■□□□□ 0.55
SUPT16H-205ENST00000556217 SLC4A3P48751 1232 aa18.46■□□□□ 0.55
SUPT16H-205ENST00000556217 EPHB4P54760 987 aa18.46■□□□□ 0.55
SUPT16H-205ENST00000556217 FAAP100Q0VG06 881 aa18.46■□□□□ 0.55
SUPT16H-205ENST00000556217 KCNA10Q16322 511 aa18.46■□□□□ 0.55
SUPT16H-205ENST00000556217 MIER1Q8N108 512 aa18.46■□□□□ 0.55
SUPT16H-205ENST00000556217 PCSK9Q8NBP7 692 aaKnown RBP18.46■□□□□ 0.55
SUPT16H-205ENST00000556217 KLHDC9Q8NEP7 349 aa18.46■□□□□ 0.55
SUPT16H-205ENST00000556217 ATXN2LQ8WWM7 1075 aaKnown RBP18.46■□□□□ 0.55
SUPT16H-205ENST00000556217 GPATCH3Q96I76 525 aa18.46■□□□□ 0.55
SUPT16H-205ENST00000556217 SPC25Q9HBM1 224 aa18.46■□□□□ 0.55
SUPT16H-205ENST00000556217 ECHDC1Q9NTX5 307 aa18.46■□□□□ 0.55
SUPT16H-205ENST00000556217 MCM3APO60318 1980 aa18.46■□□□□ 0.55
SUPT16H-205ENST00000556217 DNAJC25-GNG10A0A024R161 153 aa18.45■□□□□ 0.54
SUPT16H-205ENST00000556217 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.45■□□□□ 0.54
SUPT16H-205ENST00000556217 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.45■□□□□ 0.54
SUPT16H-205ENST00000556217 GSG1L2A8MUP6 293 aa18.45■□□□□ 0.54
SUPT16H-205ENST00000556217 SNAI1O95863 264 aaPredicted RBP18.45■□□□□ 0.54
SUPT16H-205ENST00000556217 CCDC174Q6PII3 467 aa18.45■□□□□ 0.54
SUPT16H-205ENST00000556217 CPXCR1Q8N123 301 aa18.45■□□□□ 0.54
SUPT16H-205ENST00000556217 STK11IPQ8N1F8 1099 aa18.45■□□□□ 0.54
SUPT16H-205ENST00000556217 ANKRD35Q8N283 1001 aa18.45■□□□□ 0.54
SUPT16H-205ENST00000556217 GLT1D1Q96MS3 346 aa18.45■□□□□ 0.54
SUPT16H-205ENST00000556217 CLIP2Q9UDT6 1046 aa18.45■□□□□ 0.54
SUPT16H-205ENST00000556217 FBXO40Q9UH90 709 aa18.45■□□□□ 0.54
SUPT16H-205ENST00000556217 ELP1O95163 1332 aa18.45■□□□□ 0.54
SUPT16H-205ENST00000556217 TIMP1P01033 207 aa18.44■□□□□ 0.54
SUPT16H-205ENST00000556217 GNAT2P19087 354 aa18.44■□□□□ 0.54
SUPT16H-205ENST00000556217 CST5P28325 142 aaPredicted RBP18.44■□□□□ 0.54
SUPT16H-205ENST00000556217 ACVR2BQ13705 512 aa18.44■□□□□ 0.54
SUPT16H-205ENST00000556217 ZNF444Q8N0Y2 327 aaPredicted RBP18.44■□□□□ 0.54
SUPT16H-205ENST00000556217 KBTBD3Q8NAB2 608 aa18.44■□□□□ 0.54
SUPT16H-205ENST00000556217 KIFC2Q96AC6 838 aa18.44■□□□□ 0.54
SUPT16H-205ENST00000556217 ABHD16BQ9H3Z7 469 aa18.44■□□□□ 0.54
SUPT16H-205ENST00000556217 FEM1BQ9UK73 627 aa18.44■□□□□ 0.54
SUPT16H-205ENST00000556217 SYNPO2Q9UMS6 1093 aa18.44■□□□□ 0.54
SUPT16H-205ENST00000556217 RIPK3Q9Y572 518 aa18.44■□□□□ 0.54
SUPT16H-205ENST00000556217 ZFYP08048 801 aaPredicted RBP18.43■□□□□ 0.54
SUPT16H-205ENST00000556217 C6orf222P0C671 652 aaPredicted RBP18.43■□□□□ 0.54
SUPT16H-205ENST00000556217 DNAJB2P25686 324 aa18.43■□□□□ 0.54
SUPT16H-205ENST00000556217 TDO2P48775 406 aa18.43■□□□□ 0.54
SUPT16H-205ENST00000556217 OAZ1P54368 228 aa18.43■□□□□ 0.54
SUPT16H-205ENST00000556217 CCSAPQ6IQ19 270 aaPredicted RBP18.43■□□□□ 0.54
SUPT16H-205ENST00000556217 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.43■□□□□ 0.54
SUPT16H-205ENST00000556217 CHST13Q8NET6 341 aa18.43■□□□□ 0.54
SUPT16H-205ENST00000556217 APPBP2Q92624 585 aa18.43■□□□□ 0.54
SUPT16H-205ENST00000556217 VTI1AQ96AJ9 217 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms