RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 hCG_1984214I3L0E3 225 aa16.84■□□□□ 0.29
VPS33B-205ENST00000556096 M0R2N6 131 aa16.84■□□□□ 0.29
VPS33B-205ENST00000556096 CAVIN2O95810 425 aa16.84■□□□□ 0.29
VPS33B-205ENST00000556096 LMOD1P29536 600 aaPredicted RBP16.84■□□□□ 0.29
VPS33B-205ENST00000556096 ZNF280AP59817 542 aaPredicted RBP16.84■□□□□ 0.29
VPS33B-205ENST00000556096 ZNF543Q08ER8 600 aa16.84■□□□□ 0.29
VPS33B-205ENST00000556096 GPATCH4Q5T3I0 446 aaKnown RBP16.84■□□□□ 0.29
VPS33B-205ENST00000556096 TMEM179Q6ZVK1 233 aa16.84■□□□□ 0.29
VPS33B-205ENST00000556096 RASGRP2Q7LDG7 609 aa16.84■□□□□ 0.29
VPS33B-205ENST00000556096 ZNF713Q8N859 430 aaPredicted RBP16.84■□□□□ 0.29
VPS33B-205ENST00000556096 ZNF784Q8NCA9 323 aaPredicted RBP16.84■□□□□ 0.29
VPS33B-205ENST00000556096 MYOZ2Q9NPC6 264 aa16.84■□□□□ 0.29
VPS33B-205ENST00000556096 SEC63Q9UGP8 760 aaKnown RBP16.84■□□□□ 0.29
VPS33B-205ENST00000556096 WDR90Q96KV7 1748 aa16.84■□□□□ 0.29
VPS33B-205ENST00000556096 SLURP2P0DP57 97 aa16.84■□□□□ 0.29
VPS33B-205ENST00000556096 SYKP43405 635 aa16.84■□□□□ 0.29
VPS33B-205ENST00000556096 TYW1BQ6NUM6 668 aa16.84■□□□□ 0.29
VPS33B-205ENST00000556096 HEATR3Q7Z4Q2 680 aa16.84■□□□□ 0.29
VPS33B-205ENST00000556096 CLEC10AQ8IUN9 316 aa16.84■□□□□ 0.29
VPS33B-205ENST00000556096 TRPM4Q8TD43 1214 aa16.84■□□□□ 0.29
VPS33B-205ENST00000556096 DPF2Q92785 391 aa16.84■□□□□ 0.29
VPS33B-205ENST00000556096 ZBED3Q96IU2 234 aaPredicted RBP16.84■□□□□ 0.29
VPS33B-205ENST00000556096 L3MBTL3Q96JM7 780 aaPredicted RBP16.84■□□□□ 0.29
VPS33B-205ENST00000556096 PDLIM2Q96JY6 352 aa16.84■□□□□ 0.29
VPS33B-205ENST00000556096 CLIC6Q96NY7 704 aa16.84■□□□□ 0.29
VPS33B-205ENST00000556096 SDF4Q9BRK5 362 aa16.84■□□□□ 0.29
VPS33B-205ENST00000556096 ZMYND12Q9H0C1 365 aa16.84■□□□□ 0.29
VPS33B-205ENST00000556096 HACL1Q9UJ83 578 aa16.84■□□□□ 0.29
VPS33B-205ENST00000556096 FAM196BA6NMK8 535 aa16.83■□□□□ 0.28
VPS33B-205ENST00000556096 POTEIP0CG38 1075 aa16.83■□□□□ 0.28
VPS33B-205ENST00000556096 POTEJP0CG39 1038 aa16.83■□□□□ 0.28
VPS33B-205ENST00000556096 ATP2B1P20020 1258 aa16.83■□□□□ 0.28
VPS33B-205ENST00000556096 EAPPQ56P03 285 aaPredicted RBP16.83■□□□□ 0.28
VPS33B-205ENST00000556096 TTC38Q5R3I4 469 aa16.83■□□□□ 0.28
VPS33B-205ENST00000556096 FAM200AQ8TCP9 573 aa16.83■□□□□ 0.28
VPS33B-205ENST00000556096 CSRNP1Q96S65 589 aa16.83■□□□□ 0.28
VPS33B-205ENST00000556096 CLRN2A0PK11 232 aa16.82■□□□□ 0.28
VPS33B-205ENST00000556096 TCP10L2B9ZVM9 353 aa16.82■□□□□ 0.28
VPS33B-205ENST00000556096 EPHX2P34913 555 aa16.82■□□□□ 0.28
VPS33B-205ENST00000556096 ABCB5Q2M3G0 1257 aa16.82■□□□□ 0.28
VPS33B-205ENST00000556096 PIK3AP1Q6ZUJ8 805 aa16.82■□□□□ 0.28
VPS33B-205ENST00000556096 FAM83AQ86UY5 434 aa16.82■□□□□ 0.28
VPS33B-205ENST00000556096 ELOA2Q8IYF1 753 aaPredicted RBP16.82■□□□□ 0.28
VPS33B-205ENST00000556096 FERMT2Q96AC1 680 aa16.82■□□□□ 0.28
VPS33B-205ENST00000556096 PIGSQ96S52 555 aa16.82■□□□□ 0.28
VPS33B-205ENST00000556096 UBA5Q9GZZ9 404 aa16.82■□□□□ 0.28
VPS33B-205ENST00000556096 CPVLQ9H3G5 476 aa16.82■□□□□ 0.28
VPS33B-205ENST00000556096 FRMPD2Q68DX3 1309 aaPredicted RBP16.82■□□□□ 0.28
VPS33B-205ENST00000556096 ESYT2A0FGR8 921 aa16.82■□□□□ 0.28
VPS33B-205ENST00000556096 H7C1D1 291 aa16.82■□□□□ 0.28
VPS33B-205ENST00000556096 EEF2P13639 858 aaKnown RBP16.82■□□□□ 0.28
VPS33B-205ENST00000556096 GNA11P29992 359 aa16.82■□□□□ 0.28
VPS33B-205ENST00000556096 NBPF9Q3BBW0 867 aa16.82■□□□□ 0.28
VPS33B-205ENST00000556096 NOM1Q5C9Z4 860 aaKnown RBP16.82■□□□□ 0.28
VPS33B-205ENST00000556096 DCAF4Q8WV16 495 aa16.82■□□□□ 0.28
VPS33B-205ENST00000556096 TAF1DQ9H5J8 278 aaPredicted RBP16.82■□□□□ 0.28
VPS33B-205ENST00000556096 C6orf50Q9HD87 102 aa16.82■□□□□ 0.28
VPS33B-205ENST00000556096 FAM13BQ9NYF5 915 aa16.82■□□□□ 0.28
VPS33B-205ENST00000556096 PCDHA6Q9UN73 950 aa16.82■□□□□ 0.28
VPS33B-205ENST00000556096 PCDHA8Q9Y5H6 950 aa16.82■□□□□ 0.28
VPS33B-205ENST00000556096 ASTN2O75129 1339 aaPredicted RBP16.81■□□□□ 0.28
VPS33B-205ENST00000556096 CNTNAP1P78357 1384 aa16.81■□□□□ 0.28
VPS33B-205ENST00000556096 MYH4Q9Y623 1939 aa16.81■□□□□ 0.28
VPS33B-205ENST00000556096 WNT10BO00744 389 aa16.81■□□□□ 0.28
VPS33B-205ENST00000556096 ADAMTS3O15072 1205 aa16.81■□□□□ 0.28
VPS33B-205ENST00000556096 MYO1BO43795 1136 aa16.81■□□□□ 0.28
VPS33B-205ENST00000556096 NAPAP54920 295 aa16.81■□□□□ 0.28
VPS33B-205ENST00000556096 ATP2C1P98194 919 aaPredicted RBP16.81■□□□□ 0.28
VPS33B-205ENST00000556096 ATP2B2Q01814 1243 aa16.81■□□□□ 0.28
VPS33B-205ENST00000556096 SEPT2Q15019 361 aa16.81■□□□□ 0.28
VPS33B-205ENST00000556096 ANO6Q4KMQ2 910 aa16.81■□□□□ 0.28
VPS33B-205ENST00000556096 SIAH1Q8IUQ4 282 aa16.81■□□□□ 0.28
VPS33B-205ENST00000556096 VAT1LQ9HCJ6 419 aa16.81■□□□□ 0.28
VPS33B-205ENST00000556096 KIAA1468Q9P260 1216 aa16.81■□□□□ 0.28
VPS33B-205ENST00000556096 KCNH3Q9ULD8 1083 aa16.81■□□□□ 0.28
VPS33B-205ENST00000556096 SYNPO2Q9UMS6 1093 aa16.81■□□□□ 0.28
VPS33B-205ENST00000556096 SCAF8Q9UPN6 1271 aaKnown RBP16.81■□□□□ 0.28
VPS33B-205ENST00000556096 CCDC194A0A1B0GVG4 234 aa16.8■□□□□ 0.28
VPS33B-205ENST00000556096 TBC1D12O60347 775 aa16.8■□□□□ 0.28
VPS33B-205ENST00000556096 HIRAP54198 1017 aaPredicted RBP16.8■□□□□ 0.28
VPS33B-205ENST00000556096 ICA1Q05084 483 aa16.8■□□□□ 0.28
VPS33B-205ENST00000556096 ZNF174Q15697 407 aa16.8■□□□□ 0.28
VPS33B-205ENST00000556096 STX1AQ16623 288 aa16.8■□□□□ 0.28
VPS33B-205ENST00000556096 HOMER1Q86YM7 354 aa16.8■□□□□ 0.28
VPS33B-205ENST00000556096 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.8■□□□□ 0.28
VPS33B-205ENST00000556096 GPCPD1Q9NPB8 672 aa16.8■□□□□ 0.28
VPS33B-205ENST00000556096 SCN4AP35499 1836 aa16.8■□□□□ 0.28
VPS33B-205ENST00000556096 PNMA6FA0A0J9YX94 578 aa16.79■□□□□ 0.28
VPS33B-205ENST00000556096 IQCA1LA6NCM1 817 aa16.79■□□□□ 0.28
VPS33B-205ENST00000556096 SMCO2A6NFE2 343 aa16.79■□□□□ 0.28
VPS33B-205ENST00000556096 WNT7AO00755 349 aa16.79■□□□□ 0.28
VPS33B-205ENST00000556096 GRIN1Q05586 938 aa16.79■□□□□ 0.28
VPS33B-205ENST00000556096 KIF4BQ2VIQ3 1234 aa16.79■□□□□ 0.28
VPS33B-205ENST00000556096 GMCL1P1Q8NEA9 526 aa16.79■□□□□ 0.28
VPS33B-205ENST00000556096 MTMR8Q96EF0 704 aa16.79■□□□□ 0.28
VPS33B-205ENST00000556096 JMJD4Q9H9V9 463 aa16.79■□□□□ 0.28
VPS33B-205ENST00000556096 VEZTQ9HBM0 779 aa16.79■□□□□ 0.28
VPS33B-205ENST00000556096 ADARB2Q9NS39 739 aaKnown RBP16.79■□□□□ 0.28
VPS33B-205ENST00000556096 ANO10Q9NW15 660 aa16.79■□□□□ 0.28
VPS33B-205ENST00000556096 PTGDRQ13258 359 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms