RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, human

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPO-212	ENST00000556029	STAM	Q92783	540 aa		13.75	□□□□□ -0.21
TMPO-212	ENST00000556029	LAMB4	A4D0S4	1761 aa		13.75	□□□□□ -0.21
TMPO-212	ENST00000556029	SERPINB2	P05120	415 aa		13.75	□□□□□ -0.21
TMPO-212	ENST00000556029	ALS2CR12	Q96Q35	445 aa		13.75	□□□□□ -0.21
TMPO-212	ENST00000556029	CTAGE1	Q96RT6	745 aa		13.75	□□□□□ -0.21
TMPO-212	ENST00000556029	ST7	Q9NRC1	585 aa		13.75	□□□□□ -0.21
TMPO-212	ENST00000556029	BMP15	O95972	392 aa		13.75	□□□□□ -0.21
TMPO-212	ENST00000556029	BMP6	P22004	513 aa		13.75	□□□□□ -0.21
TMPO-212	ENST00000556029	ITPK1	Q13572	414 aa		13.75	□□□□□ -0.21
TMPO-212	ENST00000556029	MORC3	Q14149	939 aa		13.75	□□□□□ -0.21
TMPO-212	ENST00000556029	CCDC93	Q567U6	631 aa		13.75	□□□□□ -0.21
TMPO-212	ENST00000556029	OGFOD1	Q8N543	542 aa		13.75	□□□□□ -0.21
TMPO-212	ENST00000556029	EPSTI1	Q96J88	318 aa		13.75	□□□□□ -0.21
TMPO-212	ENST00000556029	HOOK3	Q86VS8	718 aa		13.74	□□□□□ -0.21
TMPO-212	ENST00000556029	ZNF579	Q8NAF0	562 aa	Known RBP	13.74	□□□□□ -0.21
TMPO-212	ENST00000556029	FBF1	Q8TES7	1133 aa		13.74	□□□□□ -0.21
TMPO-212	ENST00000556029	SEC31A	O94979	1220 aa	Known RBP	13.74	□□□□□ -0.21
TMPO-212	ENST00000556029	FGFR2	P21802	821 aa		13.74	□□□□□ -0.21
TMPO-212	ENST00000556029	ERCC5	P28715	1186 aa	Predicted RBP	13.74	□□□□□ -0.21
TMPO-212	ENST00000556029	KIAA0825	Q8IV33	1275 aa		13.74	□□□□□ -0.21
TMPO-212	ENST00000556029	PSMB7	Q99436	277 aa		13.74	□□□□□ -0.21
TMPO-212	ENST00000556029	RNF26	Q9BY78	433 aa	Predicted RBP	13.74	□□□□□ -0.21
TMPO-212	ENST00000556029	PLEKHA4	Q9H4M7	779 aa		13.74	□□□□□ -0.21
TMPO-212	ENST00000556029	TNS2	Q63HR2	1409 aa		13.74	□□□□□ -0.21
TMPO-212	ENST00000556029	PNMA6A	P0CW24	399 aa	Predicted RBP	13.74	□□□□□ -0.21
TMPO-212	ENST00000556029	H2AFX	P16104	143 aa	Predicted RBP	13.74	□□□□□ -0.21
TMPO-212	ENST00000556029	CETN2	P41208	172 aa		13.74	□□□□□ -0.21
TMPO-212	ENST00000556029	TNNI2	P48788	182 aa		13.74	□□□□□ -0.21
TMPO-212	ENST00000556029	TRIM65	Q6PJ69	517 aa		13.74	□□□□□ -0.21
TMPO-212	ENST00000556029	KRT27	Q7Z3Y8	459 aa		13.74	□□□□□ -0.21
TMPO-212	ENST00000556029	SYMPK	Q92797	1274 aa	Known RBP	13.74	□□□□□ -0.21
TMPO-212	ENST00000556029	GOLGA1	Q92805	767 aa		13.74	□□□□□ -0.21
TMPO-212	ENST00000556029	WDR24	Q96S15	920 aa		13.74	□□□□□ -0.21
TMPO-212	ENST00000556029	NAA15	Q9BXJ9	866 aa	Known RBP	13.74	□□□□□ -0.21
TMPO-212	ENST00000556029	ATRN	O75882	1429 aa		13.74	□□□□□ -0.21
TMPO-212	ENST00000556029	CASP1	P29466	404 aa		13.73	□□□□□ -0.21
TMPO-212	ENST00000556029	CCT6A	P40227	531 aa	Known RBP	13.73	□□□□□ -0.21
TMPO-212	ENST00000556029	SMYD4	Q8IYR2	804 aa	Predicted RBP	13.73	□□□□□ -0.21
TMPO-212	ENST00000556029	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	13.73	□□□□□ -0.21
TMPO-212	ENST00000556029	EPC1	Q9H2F5	836 aa		13.73	□□□□□ -0.21
TMPO-212	ENST00000556029	PKD1L3	Q7Z443	1732 aa		13.73	□□□□□ -0.21
TMPO-212	ENST00000556029	FAM205C	A6NFA0	338 aa		13.73	□□□□□ -0.21
TMPO-212	ENST00000556029	MDM2	Q00987	491 aa	Predicted RBP	13.73	□□□□□ -0.21
TMPO-212	ENST00000556029	PPP2R5B	Q15173	497 aa		13.73	□□□□□ -0.21
TMPO-212	ENST00000556029	SPATA1	Q5VX52	437 aa		13.73	□□□□□ -0.21
TMPO-212	ENST00000556029	TC2N	Q8N9U0	490 aa		13.73	□□□□□ -0.21
TMPO-212	ENST00000556029	CTNND2	Q9UQB3	1225 aa		13.73	□□□□□ -0.21
TMPO-212	ENST00000556029	COL18A1	P39060	1754 aa		13.73	□□□□□ -0.21
TMPO-212	ENST00000556029	SLFN14	P0C7P3	912 aa		13.73	□□□□□ -0.21
TMPO-212	ENST00000556029	TMEM266	Q2M3C6	531 aa		13.73	□□□□□ -0.21
TMPO-212	ENST00000556029	TTC38	Q5R3I4	469 aa		13.73	□□□□□ -0.21
TMPO-212	ENST00000556029	PIK3AP1	Q6ZUJ8	805 aa		13.73	□□□□□ -0.21
TMPO-212	ENST00000556029	ARHGEF1	Q92888	912 aa	Known RBP	13.73	□□□□□ -0.21
TMPO-212	ENST00000556029	HINFP	Q9BQA5	517 aa		13.73	□□□□□ -0.21
TMPO-212	ENST00000556029	ZNF446	Q9NWS9	450 aa		13.73	□□□□□ -0.21
TMPO-212	ENST00000556029	TTF2	Q9UNY4	1162 aa	Known RBP	13.73	□□□□□ -0.21
TMPO-212	ENST00000556029	THRAP3	Q9Y2W1	955 aa	Known RBP	13.73	□□□□□ -0.21
TMPO-212	ENST00000556029	SAMM50	Q9Y512	469 aa		13.73	□□□□□ -0.21
TMPO-212	ENST00000556029	TADA3	O75528	432 aa		13.72	□□□□□ -0.21
TMPO-212	ENST00000556029	NEBL	O76041	1014 aa		13.72	□□□□□ -0.21
TMPO-212	ENST00000556029	GOLGA8H	P0CJ92	632 aa		13.72	□□□□□ -0.21
TMPO-212	ENST00000556029	ZYX	Q15942	572 aa	Known RBP	13.72	□□□□□ -0.21
TMPO-212	ENST00000556029	ZNF34	Q8IZ26	560 aa		13.72	□□□□□ -0.21
TMPO-212	ENST00000556029	FERMT2	Q96AC1	680 aa		13.72	□□□□□ -0.21
TMPO-212	ENST00000556029	RAB34	Q9BZG1	259 aa		13.72	□□□□□ -0.21
TMPO-212	ENST00000556029	INTS13	Q9NVM9	706 aa		13.72	□□□□□ -0.21
TMPO-212	ENST00000556029	RBM28	Q9NW13	759 aa	Known RBP	13.72	□□□□□ -0.21
TMPO-212	ENST00000556029	SOWAHD	A6NJG2	315 aa		13.72	□□□□□ -0.21
TMPO-212	ENST00000556029	GJC1	P36383	396 aa		13.72	□□□□□ -0.21
TMPO-212	ENST00000556029	KIAA0753	Q2KHM9	967 aa		13.72	□□□□□ -0.21
TMPO-212	ENST00000556029	ELOA2	Q8IYF1	753 aa	Predicted RBP	13.72	□□□□□ -0.21
TMPO-212	ENST00000556029	CALML4	Q96GE6	196 aa		13.72	□□□□□ -0.21
TMPO-212	ENST00000556029	PNPLA7	Q6ZV29	1317 aa		13.72	□□□□□ -0.21
TMPO-212	ENST00000556029	ACTN4	O43707	911 aa	Known RBP	13.72	□□□□□ -0.21
TMPO-212	ENST00000556029	COBL	O75128	1261 aa		13.72	□□□□□ -0.21
TMPO-212	ENST00000556029	CALM1	P0DP23	149 aa		13.72	□□□□□ -0.21
TMPO-212	ENST00000556029	CALM2	P0DP24	149 aa		13.72	□□□□□ -0.21
TMPO-212	ENST00000556029	CALM3	P0DP25	149 aa		13.72	□□□□□ -0.21
TMPO-212	ENST00000556029	MCM3	P25205	808 aa		13.72	□□□□□ -0.21
TMPO-212	ENST00000556029	RBL2	Q08999	1139 aa		13.72	□□□□□ -0.21
TMPO-212	ENST00000556029	GPR161	Q8N6U8	529 aa	Known RBP	13.72	□□□□□ -0.21
TMPO-212	ENST00000556029	BLZF1	Q9H2G9	400 aa		13.72	□□□□□ -0.21
TMPO-212	ENST00000556029	TEX33	O43247	280 aa		13.72	□□□□□ -0.21
TMPO-212	ENST00000556029	HSF2BP	O75031	334 aa		13.72	□□□□□ -0.21
TMPO-212	ENST00000556029	CEP112	Q8N8E3	955 aa		13.72	□□□□□ -0.21
TMPO-212	ENST00000556029	PAGE5	Q96GU1	130 aa		13.72	□□□□□ -0.21
TMPO-212	ENST00000556029	STK32B	Q9NY57	414 aa		13.72	□□□□□ -0.21
TMPO-212	ENST00000556029	MYH15	Q9Y2K3	1946 aa		13.72	□□□□□ -0.21
TMPO-212	ENST00000556029	PRDX5	P30044	214 aa		13.71	□□□□□ -0.21
TMPO-212	ENST00000556029	ASIC1	P78348	528 aa		13.71	□□□□□ -0.21
TMPO-212	ENST00000556029	MICALCL	Q6ZW33	695 aa		13.71	□□□□□ -0.21
TMPO-212	ENST00000556029	IQUB	Q8NA54	791 aa		13.71	□□□□□ -0.21
TMPO-212	ENST00000556029	TJP1	Q07157	1748 aa		13.71	□□□□□ -0.21
TMPO-212	ENST00000556029		H0YIN7	160 aa		13.71	□□□□□ -0.21
TMPO-212	ENST00000556029	PLEKHA8P1	O95397	391 aa		13.71	□□□□□ -0.21
TMPO-212	ENST00000556029	MYCN	P04198	464 aa	Predicted RBP	13.71	□□□□□ -0.21
TMPO-212	ENST00000556029	PLCG2	P16885	1265 aa		13.71	□□□□□ -0.21
TMPO-212	ENST00000556029	MTF1	Q14872	753 aa		13.71	□□□□□ -0.21
TMPO-212	ENST00000556029	SYCP3	Q8IZU3	236 aa		13.71	□□□□□ -0.21
TMPO-212	ENST00000556029	CCDC42	Q96M95	316 aa		13.71	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 24 ms