RNA–Protein interactions for RNA: ENST00000555933.1

TRIM9-205, Transcript of tripartite motif containing 9, humanhuman

TSL 3

Gene TRIM9, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-205ENST00000555933 CAMSAP2Q08AD1 1489 aa8.15□□□□□ -1.1
TRIM9-205ENST00000555933 SHANK2Q9UPX8 1470 aa8.15□□□□□ -1.1
TRIM9-205ENST00000555933 UBOX5O94941 541 aa8.15□□□□□ -1.1
TRIM9-205ENST00000555933 LTKP29376 864 aa8.15□□□□□ -1.1
TRIM9-205ENST00000555933 BHLHE22Q8NFJ8 381 aaPredicted RBP8.15□□□□□ -1.1
TRIM9-205ENST00000555933 MYLIPQ8WY64 445 aa8.15□□□□□ -1.1
TRIM9-205ENST00000555933 GMIPQ9P107 970 aa8.15□□□□□ -1.1
TRIM9-205ENST00000555933 PREX2Q70Z35 1606 aa8.14□□□□□ -1.11
TRIM9-205ENST00000555933 ARHGEF5Q12774 1597 aa8.14□□□□□ -1.11
TRIM9-205ENST00000555933 ARAP3Q8WWN8 1544 aa8.14□□□□□ -1.11
TRIM9-205ENST00000555933 ZGLP1P0C6A0 271 aa8.14□□□□□ -1.11
TRIM9-205ENST00000555933 RAG1P15918 1043 aa8.14□□□□□ -1.11
TRIM9-205ENST00000555933 LDLRAD1Q5T700 205 aa8.14□□□□□ -1.11
TRIM9-205ENST00000555933 OVOS1Q6IE37 1185 aa8.14□□□□□ -1.11
TRIM9-205ENST00000555933 EHMT1Q9H9B1 1298 aa8.14□□□□□ -1.11
TRIM9-205ENST00000555933 SP110Q9HB58 689 aa8.14□□□□□ -1.11
TRIM9-205ENST00000555933 UBP1Q9NZI7 540 aa8.14□□□□□ -1.11
TRIM9-205ENST00000555933 CDK11AQ9UQ88 783 aaPredicted RBP8.14□□□□□ -1.11
TRIM9-205ENST00000555933 CROCC2H7BZ55 1655 aa8.14□□□□□ -1.11
TRIM9-205ENST00000555933 KDM6BO15054 1643 aa8.14□□□□□ -1.11
TRIM9-205ENST00000555933 SAMD9LQ8IVG5 1584 aa8.14□□□□□ -1.11
TRIM9-205ENST00000555933 ZNF644Q9H582 1327 aaPredicted RBP8.13□□□□□ -1.11
TRIM9-205ENST00000555933 TRHRP34981 398 aaPredicted RBP8.13□□□□□ -1.11
TRIM9-205ENST00000555933 DIRC2Q96SL1 478 aa8.13□□□□□ -1.11
TRIM9-205ENST00000555933 BCL11AQ9H165 835 aa8.13□□□□□ -1.11
TRIM9-205ENST00000555933 NSUN3Q9H649 340 aaKnown RBP8.13□□□□□ -1.11
TRIM9-205ENST00000555933 CDC42BPBQ9Y5S2 1711 aa8.12□□□□□ -1.11
TRIM9-205ENST00000555933 ZNF16P17020 682 aaPredicted RBP8.12□□□□□ -1.11
TRIM9-205ENST00000555933 POLR2BP30876 1174 aaKnown RBP8.12□□□□□ -1.11
TRIM9-205ENST00000555933 CHMP4BP1P59074 171 aa8.12□□□□□ -1.11
TRIM9-205ENST00000555933 CLCQ05315 142 aa8.12□□□□□ -1.11
TRIM9-205ENST00000555933 CLEC16AQ2KHT3 1053 aa8.12□□□□□ -1.11
TRIM9-205ENST00000555933 SEZ6Q53EL9 994 aa8.12□□□□□ -1.11
TRIM9-205ENST00000555933 CDCP2Q5VXM1 449 aa8.12□□□□□ -1.11
TRIM9-205ENST00000555933 PDZD8Q8NEN9 1154 aa8.12□□□□□ -1.11
TRIM9-205ENST00000555933 MAST1Q9Y2H9 1570 aa8.11□□□□□ -1.11
TRIM9-205ENST00000555933 RNF4P78317 190 aa8.11□□□□□ -1.11
TRIM9-205ENST00000555933 TEKQ02763 1124 aa8.11□□□□□ -1.11
TRIM9-205ENST00000555933 APOBRQ0VD83 1088 aa8.11□□□□□ -1.11
TRIM9-205ENST00000555933 NMIQ13287 307 aaPredicted RBP8.11□□□□□ -1.11
TRIM9-205ENST00000555933 FAM50AQ14320 339 aaKnown RBP8.11□□□□□ -1.11
TRIM9-205ENST00000555933 TMCO4Q5TGY1 634 aa8.11□□□□□ -1.11
TRIM9-205ENST00000555933 GK5Q6ZS86 529 aa8.11□□□□□ -1.11
TRIM9-205ENST00000555933 SYDE1Q6ZW31 735 aaPredicted RBP8.11□□□□□ -1.11
TRIM9-205ENST00000555933 REXO1Q8N1G1 1221 aaKnown RBP8.11□□□□□ -1.11
TRIM9-205ENST00000555933 FBXO15Q8NCQ5 510 aaPredicted RBP8.11□□□□□ -1.11
TRIM9-205ENST00000555933 PPP1R16BQ96T49 567 aa8.11□□□□□ -1.11
TRIM9-205ENST00000555933 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.11□□□□□ -1.11
TRIM9-205ENST00000555933 C19orf44Q9H6X5 657 aa8.11□□□□□ -1.11
TRIM9-205ENST00000555933 CNNM2Q9H8M5 875 aa8.11□□□□□ -1.11
TRIM9-205ENST00000555933 NCOA1Q15788 1441 aa8.11□□□□□ -1.11
TRIM9-205ENST00000555933 KIAA1107Q9UPP5 1409 aa8.11□□□□□ -1.11
TRIM9-205ENST00000555933 ARHGEF12Q9NZN5 1544 aa8.1□□□□□ -1.11
TRIM9-205ENST00000555933 PLEKHD1A6NEE1 506 aa8.1□□□□□ -1.11
TRIM9-205ENST00000555933 TSPAN15O95858 294 aa8.1□□□□□ -1.11
TRIM9-205ENST00000555933 NBPF12Q5TAG4 269 aaPredicted RBP8.1□□□□□ -1.11
TRIM9-205ENST00000555933 CILP2Q8IUL8 1156 aa8.1□□□□□ -1.11
TRIM9-205ENST00000555933 TMEM87AQ8NBN3 555 aa8.1□□□□□ -1.11
TRIM9-205ENST00000555933 DHX38Q92620 1227 aaKnown RBP8.1□□□□□ -1.11
TRIM9-205ENST00000555933 ATG4CQ96DT6 458 aa8.1□□□□□ -1.11
TRIM9-205ENST00000555933 HDAC8Q9BY41 377 aa8.1□□□□□ -1.11
TRIM9-205ENST00000555933 RNF32Q9H0A6 362 aa8.1□□□□□ -1.11
TRIM9-205ENST00000555933 KCNK12Q9HB15 430 aa8.1□□□□□ -1.11
TRIM9-205ENST00000555933 EBF1Q9UH73 591 aa8.1□□□□□ -1.11
TRIM9-205ENST00000555933 WDR7Q9Y4E6 1490 aa8.1□□□□□ -1.11
TRIM9-205ENST00000555933 PLCH2O75038 1416 aa8.1□□□□□ -1.11
TRIM9-205ENST00000555933 KRT1P04264 644 aa8.09□□□□□ -1.11
TRIM9-205ENST00000555933 MCM4P33991 863 aa8.09□□□□□ -1.11
TRIM9-205ENST00000555933 RAP1GAPP47736 663 aa8.09□□□□□ -1.11
TRIM9-205ENST00000555933 TIGD5Q53EQ6 642 aa8.09□□□□□ -1.11
TRIM9-205ENST00000555933 NLRC3Q7RTR2 1065 aa8.09□□□□□ -1.11
TRIM9-205ENST00000555933 LILRA2Q8N149 483 aa8.09□□□□□ -1.11
TRIM9-205ENST00000555933 OXR1Q8N573 874 aa8.09□□□□□ -1.11
TRIM9-205ENST00000555933 ENOX1Q8TC92 643 aaKnown RBP8.09□□□□□ -1.11
TRIM9-205ENST00000555933 SYTL5Q8TDW5 730 aaPredicted RBP8.09□□□□□ -1.11
TRIM9-205ENST00000555933 NT5C1AQ9BXI3 368 aa8.09□□□□□ -1.11
TRIM9-205ENST00000555933 ASCC2Q9H1I8 757 aaPredicted RBP8.09□□□□□ -1.11
TRIM9-205ENST00000555933 EPB41L4BQ9H329 900 aa8.09□□□□□ -1.11
TRIM9-205ENST00000555933 ANTXR1Q9H6X2 564 aa8.09□□□□□ -1.11
TRIM9-205ENST00000555933 ZNF281Q9Y2X9 895 aa8.09□□□□□ -1.11
TRIM9-205ENST00000555933 ABCA9Q8IUA7 1624 aa8.09□□□□□ -1.11
TRIM9-205ENST00000555933 FITM1A5D6W6 292 aa8.08□□□□□ -1.12
TRIM9-205ENST00000555933 NR0B2Q15466 257 aa8.08□□□□□ -1.12
TRIM9-205ENST00000555933 NBPF9Q3BBW0 867 aa8.08□□□□□ -1.12
TRIM9-205ENST00000555933 LCE1DQ5T752 114 aa8.08□□□□□ -1.12
TRIM9-205ENST00000555933 TMC3Q7Z5M5 1100 aa8.08□□□□□ -1.12
TRIM9-205ENST00000555933 SLITRK4Q8IW52 837 aa8.08□□□□□ -1.12
TRIM9-205ENST00000555933 NKD1Q969G9 470 aa8.08□□□□□ -1.12
TRIM9-205ENST00000555933 SYTL4Q96C24 671 aaPredicted RBP8.08□□□□□ -1.12
TRIM9-205ENST00000555933 EAF1Q96JC9 268 aaPredicted RBP8.08□□□□□ -1.12
TRIM9-205ENST00000555933 KRTAP4-7Q9BYR0 210 aa8.08□□□□□ -1.12
TRIM9-205ENST00000555933 DCP1AQ9NPI6 582 aaPredicted RBP8.08□□□□□ -1.12
TRIM9-205ENST00000555933 ABCC1P33527 1531 aa8.08□□□□□ -1.12
TRIM9-205ENST00000555933 KDM5DQ9BY66 1539 aa8.08□□□□□ -1.12
TRIM9-205ENST00000555933 ZNF165P49910 485 aa8.07□□□□□ -1.12
TRIM9-205ENST00000555933 RAD51AP2Q09MP3 1159 aa8.07□□□□□ -1.12
TRIM9-205ENST00000555933 DUSP4Q13115 394 aa8.07□□□□□ -1.12
TRIM9-205ENST00000555933 SNW1Q13573 536 aaKnown RBP8.07□□□□□ -1.12
TRIM9-205ENST00000555933 KIAA0825Q8IV33 1275 aa8.07□□□□□ -1.12
TRIM9-205ENST00000555933 USHBP1Q8N6Y0 703 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms