RNA–Protein interactions for RNA: ENST00000555837.5

CDKN3-208, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2

Gene CDKN3, Length 689 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-208ENST00000555837 ERCC3P19447 782 aa26.83■■□□□ 1.89
CDKN3-208ENST00000555837 MAP2K5Q13163 448 aa26.83■■□□□ 1.89
CDKN3-208ENST00000555837 TMEM132BQ14DG7 1078 aa26.83■■□□□ 1.89
CDKN3-208ENST00000555837 APBA2Q99767 749 aa26.83■■□□□ 1.89
CDKN3-208ENST00000555837 LSG1Q9H089 658 aaKnown RBP26.83■■□□□ 1.89
CDKN3-208ENST00000555837 FBXO40Q9UH90 709 aa26.83■■□□□ 1.89
CDKN3-208ENST00000555837 A0A0G2JMZ2 1700 aa26.82■■□□□ 1.88
CDKN3-208ENST00000555837 E7EWF7 191 aa26.82■■□□□ 1.88
CDKN3-208ENST00000555837 HMGCRP04035 888 aa26.82■■□□□ 1.88
CDKN3-208ENST00000555837 ZKSCAN1P17029 563 aaPredicted RBP26.82■■□□□ 1.88
CDKN3-208ENST00000555837 MORN1Q5T089 497 aa26.82■■□□□ 1.88
CDKN3-208ENST00000555837 IFIT1BQ5T764 474 aaKnown RBP26.82■■□□□ 1.88
CDKN3-208ENST00000555837 DPP9Q86TI2 863 aa26.82■■□□□ 1.88
CDKN3-208ENST00000555837 SLC38A10Q9HBR0 1119 aa26.82■■□□□ 1.88
CDKN3-208ENST00000555837 TNKSO95271 1327 aa26.82■■□□□ 1.88
CDKN3-208ENST00000555837 GRB14Q14449 540 aa26.81■■□□□ 1.88
CDKN3-208ENST00000555837 KCTD2Q14681 263 aa26.81■■□□□ 1.88
CDKN3-208ENST00000555837 POTEEQ6S8J3 1075 aa26.81■■□□□ 1.88
CDKN3-208ENST00000555837 PNMA1Q8ND90 353 aa26.81■■□□□ 1.88
CDKN3-208ENST00000555837 SH3TC2Q8TF17 1288 aa26.81■■□□□ 1.88
CDKN3-208ENST00000555837 ZKSCAN3Q9BRR0 538 aa26.81■■□□□ 1.88
CDKN3-208ENST00000555837 RLFQ13129 1914 aa26.8■■□□□ 1.88
CDKN3-208ENST00000555837 EPB41L2O43491 1005 aaKnown RBP26.8■■□□□ 1.88
CDKN3-208ENST00000555837 CYP2B6P20813 491 aa26.8■■□□□ 1.88
CDKN3-208ENST00000555837 KRT32Q14532 448 aa26.8■■□□□ 1.88
CDKN3-208ENST00000555837 SKAP1Q86WV1 359 aa26.8■■□□□ 1.88
CDKN3-208ENST00000555837 TMTC2Q8N394 836 aa26.8■■□□□ 1.88
CDKN3-208ENST00000555837 ZNF214Q9UL59 606 aaPredicted RBP26.8■■□□□ 1.88
CDKN3-208ENST00000555837 MTMR7Q9Y216 660 aa26.8■■□□□ 1.88
CDKN3-208ENST00000555837 ZSWIM8A7E2V4 1837 aa26.8■■□□□ 1.88
CDKN3-208ENST00000555837 HOXC6P09630 235 aa26.79■■□□□ 1.88
CDKN3-208ENST00000555837 PDHBP11177 359 aa26.79■■□□□ 1.88
CDKN3-208ENST00000555837 TKFCQ3LXA3 575 aa26.79■■□□□ 1.88
CDKN3-208ENST00000555837 SNRNP48Q6IEG0 339 aaKnown RBP26.79■■□□□ 1.88
CDKN3-208ENST00000555837 BTNL9Q6UXG8 535 aa26.79■■□□□ 1.88
CDKN3-208ENST00000555837 KCTD1Q719H9 257 aa26.79■■□□□ 1.88
CDKN3-208ENST00000555837 ENAHQ8N8S7 591 aaPredicted RBP26.79■■□□□ 1.88
CDKN3-208ENST00000555837 CHST13Q8NET6 341 aa26.79■■□□□ 1.88
CDKN3-208ENST00000555837 PARP14Q460N5 1801 aa26.79■■□□□ 1.88
CDKN3-208ENST00000555837 IFIT3O14879 490 aaKnown RBP26.78■■□□□ 1.88
CDKN3-208ENST00000555837 NECTIN1Q15223 517 aa26.78■■□□□ 1.88
CDKN3-208ENST00000555837 ASPRV1Q53RT3 343 aa26.78■■□□□ 1.88
CDKN3-208ENST00000555837 MFSD14CQ5VZR4 134 aa26.78■■□□□ 1.88
CDKN3-208ENST00000555837 CPXCR1Q8N123 301 aa26.78■■□□□ 1.88
CDKN3-208ENST00000555837 USP6NLQ92738 828 aa26.78■■□□□ 1.88
CDKN3-208ENST00000555837 PEX10O60683 326 aa26.77■■□□□ 1.88
CDKN3-208ENST00000555837 INHAP05111 366 aa26.77■■□□□ 1.88
CDKN3-208ENST00000555837 SNHG28P0DPA3 235 aa26.77■■□□□ 1.88
CDKN3-208ENST00000555837 MCM5P33992 734 aa26.77■■□□□ 1.88
CDKN3-208ENST00000555837 CREB3L3Q68CJ9 461 aa26.77■■□□□ 1.88
CDKN3-208ENST00000555837 REPS2Q8NFH8 660 aa26.77■■□□□ 1.88
CDKN3-208ENST00000555837 MMP19Q99542 508 aa26.77■■□□□ 1.88
CDKN3-208ENST00000555837 SLC27A2O14975 620 aa26.76■■□□□ 1.87
CDKN3-208ENST00000555837 ELNP15502 786 aa26.76■■□□□ 1.87
CDKN3-208ENST00000555837 ADORA2AP29274 412 aa26.76■■□□□ 1.87
CDKN3-208ENST00000555837 RGS19P49795 217 aa26.76■■□□□ 1.87
CDKN3-208ENST00000555837 ZNF543Q08ER8 600 aa26.76■■□□□ 1.87
CDKN3-208ENST00000555837 WTAPQ15007 396 aa26.76■■□□□ 1.87
CDKN3-208ENST00000555837 RNF208Q9H0X6 261 aa26.76■■□□□ 1.87
CDKN3-208ENST00000555837 PRR12Q9ULL5 1215 aa26.76■■□□□ 1.87
CDKN3-208ENST00000555837 HMGB1P09429 215 aaKnown RBP26.75■■□□□ 1.87
CDKN3-208ENST00000555837 PARP1P09874 1014 aaKnown RBP26.75■■□□□ 1.87
CDKN3-208ENST00000555837 SOX10P56693 466 aa26.75■■□□□ 1.87
CDKN3-208ENST00000555837 SYDE2Q5VT97 1194 aa26.75■■□□□ 1.87
CDKN3-208ENST00000555837 DDX11Q96FC9 970 aa26.75■■□□□ 1.87
CDKN3-208ENST00000555837 TMEM87BQ96K49 555 aa26.75■■□□□ 1.87
CDKN3-208ENST00000555837 HMX1Q9NP08 348 aaPredicted RBP26.75■■□□□ 1.87
CDKN3-208ENST00000555837 DIS3Q9Y2L1 958 aaKnown RBP26.75■■□□□ 1.87
CDKN3-208ENST00000555837 RPTORQ8N122 1335 aa26.74■■□□□ 1.87
CDKN3-208ENST00000555837 DOCK3Q8IZD9 2030 aa26.74■■□□□ 1.87
CDKN3-208ENST00000555837 CCL5P13501 91 aa26.74■■□□□ 1.87
CDKN3-208ENST00000555837 CATIPQ7Z7H3 387 aa26.74■■□□□ 1.87
CDKN3-208ENST00000555837 GPCPD1Q9NPB8 672 aa26.74■■□□□ 1.87
CDKN3-208ENST00000555837 GJB1P08034 283 aa26.73■■□□□ 1.87
CDKN3-208ENST00000555837 TRAF1Q13077 416 aa26.73■■□□□ 1.87
CDKN3-208ENST00000555837 TMEM67Q5HYA8 995 aa26.73■■□□□ 1.87
CDKN3-208ENST00000555837 OLFML2BQ68BL8 750 aa26.73■■□□□ 1.87
CDKN3-208ENST00000555837 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.73■■□□□ 1.87
CDKN3-208ENST00000555837 RAVER2Q9HCJ3 691 aaKnown RBP26.73■■□□□ 1.87
CDKN3-208ENST00000555837 ZNF236Q9UL36 1845 aa26.73■■□□□ 1.87
CDKN3-208ENST00000555837 SLC4A3P48751 1232 aa26.72■■□□□ 1.87
CDKN3-208ENST00000555837 SEC23AQ15436 765 aa26.72■■□□□ 1.87
CDKN3-208ENST00000555837 TSGA10IPQ3SY00 556 aa26.72■■□□□ 1.87
CDKN3-208ENST00000555837 CYB5R4Q7L1T6 521 aa26.72■■□□□ 1.87
CDKN3-208ENST00000555837 ANKRD35Q8N283 1001 aa26.72■■□□□ 1.87
CDKN3-208ENST00000555837 RANBP17Q9H2T7 1088 aaKnown RBP26.72■■□□□ 1.87
CDKN3-208ENST00000555837 ACAD9Q9H845 621 aa26.72■■□□□ 1.87
CDKN3-208ENST00000555837 COL11A1P12107 1806 aaPredicted RBP26.72■■□□□ 1.87
CDKN3-208ENST00000555837 FRMPD2Q68DX3 1309 aaPredicted RBP26.71■■□□□ 1.87
CDKN3-208ENST00000555837 ICAM1P05362 532 aa26.71■■□□□ 1.87
CDKN3-208ENST00000555837 MB21D2Q8IYB1 491 aaPredicted RBP26.71■■□□□ 1.87
CDKN3-208ENST00000555837 MSL3Q8N5Y2 521 aaKnown RBP26.71■■□□□ 1.87
CDKN3-208ENST00000555837 TRIB2Q92519 343 aa26.71■■□□□ 1.87
CDKN3-208ENST00000555837 MAF1Q9H063 256 aa26.71■■□□□ 1.87
CDKN3-208ENST00000555837 PFASO15067 1338 aa26.7■■□□□ 1.87
CDKN3-208ENST00000555837 WDR19Q8NEZ3 1342 aa26.7■■□□□ 1.87
CDKN3-208ENST00000555837 MLLT1Q03111 559 aaPredicted RBP26.7■■□□□ 1.86
CDKN3-208ENST00000555837 CHMP4CQ96CF2 233 aa26.7■■□□□ 1.86
CDKN3-208ENST00000555837 NEK1Q96PY6 1258 aa26.7■■□□□ 1.86
CDKN3-208ENST00000555837 CCPG1Q9ULG6 757 aa26.7■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms