RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 DSG3P32926 999 aa14.48□□□□□ -0.09
SHMT2-221ENST00000555773 IKQ13123 557 aaPredicted RBP14.48□□□□□ -0.09
SHMT2-221ENST00000555773 CUL4AQ13619 759 aa14.48□□□□□ -0.09
SHMT2-221ENST00000555773 TREML2Q5T2D2 321 aa14.48□□□□□ -0.09
SHMT2-221ENST00000555773 TTBK2Q6IQ55 1244 aa14.48□□□□□ -0.09
SHMT2-221ENST00000555773 SRBD1Q8N5C6 995 aaKnown RBP14.48□□□□□ -0.09
SHMT2-221ENST00000555773 NECAB1Q8N987 351 aa14.48□□□□□ -0.09
SHMT2-221ENST00000555773 PTPN18Q99952 460 aa14.48□□□□□ -0.09
SHMT2-221ENST00000555773 SLF1Q9BQI6 1058 aa14.48□□□□□ -0.09
SHMT2-221ENST00000555773 SPZ1Q9BXG8 430 aa14.48□□□□□ -0.09
SHMT2-221ENST00000555773 UBA5Q9GZZ9 404 aa14.48□□□□□ -0.09
SHMT2-221ENST00000555773 RIOX1Q9H6W3 641 aa14.48□□□□□ -0.09
SHMT2-221ENST00000555773 NCOA5Q9HCD5 579 aaKnown RBP14.48□□□□□ -0.09
SHMT2-221ENST00000555773 RBM27Q9P2N5 1060 aaKnown RBP14.48□□□□□ -0.09
SHMT2-221ENST00000555773 PPP1R9AQ9ULJ8 1098 aa14.48□□□□□ -0.09
SHMT2-221ENST00000555773 PDHXO00330 501 aa14.47□□□□□ -0.09
SHMT2-221ENST00000555773 VEGFBP49765 207 aa14.47□□□□□ -0.09
SHMT2-221ENST00000555773 IRX3P78415 501 aaPredicted RBP14.47□□□□□ -0.09
SHMT2-221ENST00000555773 GRM1Q13255 1194 aa14.47□□□□□ -0.09
SHMT2-221ENST00000555773 NTRK3Q16288 839 aa14.47□□□□□ -0.09
SHMT2-221ENST00000555773 SYDE2Q5VT97 1194 aa14.47□□□□□ -0.09
SHMT2-221ENST00000555773 RASGRP2Q7LDG7 609 aa14.47□□□□□ -0.09
SHMT2-221ENST00000555773 IFNL1Q8IU54 200 aa14.47□□□□□ -0.09
SHMT2-221ENST00000555773 CCDC83Q8IWF9 413 aa14.47□□□□□ -0.09
SHMT2-221ENST00000555773 ADGRF4Q8IZF3 695 aa14.47□□□□□ -0.09
SHMT2-221ENST00000555773 GTF3C2Q8WUA4 911 aaPredicted RBP14.47□□□□□ -0.09
SHMT2-221ENST00000555773 ASCC2Q9H1I8 757 aaPredicted RBP14.47□□□□□ -0.09
SHMT2-221ENST00000555773 PRR12Q9ULL5 1215 aa14.47□□□□□ -0.09
SHMT2-221ENST00000555773 ADAMTS5Q9UNA0 930 aa14.47□□□□□ -0.09
SHMT2-221ENST00000555773 OTOFQ9HC10 1997 aa14.47□□□□□ -0.09
SHMT2-221ENST00000555773 ZBED4O75132 1171 aa14.46□□□□□ -0.09
SHMT2-221ENST00000555773 PLEKHA8P1O95397 391 aa14.46□□□□□ -0.09
SHMT2-221ENST00000555773 ALDH1A1P00352 501 aa14.46□□□□□ -0.09
SHMT2-221ENST00000555773 SLC16A2P36021 539 aa14.46□□□□□ -0.09
SHMT2-221ENST00000555773 AKAP17AQ02040 695 aaKnown RBP14.46□□□□□ -0.09
SHMT2-221ENST00000555773 FUT2Q10981 343 aa14.46□□□□□ -0.09
SHMT2-221ENST00000555773 LBX2Q6XYB7 198 aa14.46□□□□□ -0.09
SHMT2-221ENST00000555773 NBPF11Q86T75 865 aa14.46□□□□□ -0.09
SHMT2-221ENST00000555773 TRIM22Q8IYM9 498 aa14.46□□□□□ -0.09
SHMT2-221ENST00000555773 FAM43AQ8N2R8 423 aa14.46□□□□□ -0.09
SHMT2-221ENST00000555773 MB21D1Q8N884 522 aa14.46□□□□□ -0.09
SHMT2-221ENST00000555773 KIFC2Q96AC6 838 aa14.46□□□□□ -0.09
SHMT2-221ENST00000555773 INTS4Q96HW7 963 aaKnown RBP14.46□□□□□ -0.09
SHMT2-221ENST00000555773 P2RX7Q99572 595 aaKnown RBP14.46□□□□□ -0.09
SHMT2-221ENST00000555773 JMJD4Q9H9V9 463 aa14.46□□□□□ -0.09
SHMT2-221ENST00000555773 VAT1LQ9HCJ6 419 aa14.46□□□□□ -0.09
SHMT2-221ENST00000555773 FBXO28Q9NVF7 368 aa14.46□□□□□ -0.09
SHMT2-221ENST00000555773 PNMA2Q9UL42 364 aa14.46□□□□□ -0.09
SHMT2-221ENST00000555773 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.46□□□□□ -0.09
SHMT2-221ENST00000555773 V9GY48 417 aaPredicted RBP14.46□□□□□ -0.09
SHMT2-221ENST00000555773 ATAD5Q96QE3 1844 aa14.45□□□□□ -0.1
SHMT2-221ENST00000555773 PRPF3O43395 683 aaKnown RBP14.45□□□□□ -0.1
SHMT2-221ENST00000555773 CYTH3O43739 400 aa14.45□□□□□ -0.1
SHMT2-221ENST00000555773 HTRA3P83110 453 aa14.45□□□□□ -0.1
SHMT2-221ENST00000555773 SSRP1Q08945 709 aaKnown RBP14.45□□□□□ -0.1
SHMT2-221ENST00000555773 TRAF1Q13077 416 aa14.45□□□□□ -0.1
SHMT2-221ENST00000555773 CCDC82Q8N4S0 544 aa14.45□□□□□ -0.1
SHMT2-221ENST00000555773 MTMR8Q96EF0 704 aa14.45□□□□□ -0.1
SHMT2-221ENST00000555773 RRP36Q96EU6 259 aaKnown RBP14.45□□□□□ -0.1
SHMT2-221ENST00000555773 PARK7Q99497 189 aaKnown RBP14.45□□□□□ -0.1
SHMT2-221ENST00000555773 RNF26Q9BY78 433 aaPredicted RBP14.45□□□□□ -0.1
SHMT2-221ENST00000555773 CTDP1Q9Y5B0 961 aaPredicted RBP14.45□□□□□ -0.1
SHMT2-221ENST00000555773 PHIPQ8WWQ0 1821 aa14.44□□□□□ -0.1
SHMT2-221ENST00000555773 PNMA6FA0A0J9YX94 578 aa14.44□□□□□ -0.1
SHMT2-221ENST00000555773 SPDYE16A6NNV3 312 aaPredicted RBP14.44□□□□□ -0.1
SHMT2-221ENST00000555773 IGF2BP3O00425 579 aaKnown RBP eCLIP14.44□□□□□ -0.1
SHMT2-221ENST00000555773 VWA5AO00534 786 aa14.44□□□□□ -0.1
SHMT2-221ENST00000555773 ZBTB5O15062 677 aa14.44□□□□□ -0.1
SHMT2-221ENST00000555773 AOC2O75106 756 aa14.44□□□□□ -0.1
SHMT2-221ENST00000555773 FMNL1O95466 1100 aaPredicted RBP14.44□□□□□ -0.1
SHMT2-221ENST00000555773 CTDNEP1O95476 244 aa14.44□□□□□ -0.1
SHMT2-221ENST00000555773 GCLCP48506 637 aaPredicted RBP14.44□□□□□ -0.1
SHMT2-221ENST00000555773 HERVK_113P62684 666 aa14.44□□□□□ -0.1
SHMT2-221ENST00000555773 HMGN5P82970 282 aaKnown RBP14.44□□□□□ -0.1
SHMT2-221ENST00000555773 ST3GAL1Q11201 340 aa14.44□□□□□ -0.1
SHMT2-221ENST00000555773 SLC35G1Q2M3R5 365 aa14.44□□□□□ -0.1
SHMT2-221ENST00000555773 CMTR1Q8N1G2 835 aaKnown RBP14.44□□□□□ -0.1
SHMT2-221ENST00000555773 NSUN7Q8NE18 718 aaKnown RBP14.44□□□□□ -0.1
SHMT2-221ENST00000555773 SMARCC2Q8TAQ2 1214 aa14.44□□□□□ -0.1
SHMT2-221ENST00000555773 ZIC5Q96T25 663 aa14.44□□□□□ -0.1
SHMT2-221ENST00000555773 RANBP17Q9H2T7 1088 aaKnown RBP14.44□□□□□ -0.1
SHMT2-221ENST00000555773 CPVLQ9H3G5 476 aa14.44□□□□□ -0.1
SHMT2-221ENST00000555773 SLC38A10Q9HBR0 1119 aa14.44□□□□□ -0.1
SHMT2-221ENST00000555773 SEC63Q9UGP8 760 aaKnown RBP14.44□□□□□ -0.1
SHMT2-221ENST00000555773 ATP2A1O14983 1001 aa14.43□□□□□ -0.1
SHMT2-221ENST00000555773 OAZ1P54368 228 aa14.43□□□□□ -0.1
SHMT2-221ENST00000555773 WASF1Q92558 559 aa14.43□□□□□ -0.1
SHMT2-221ENST00000555773 ATG4CQ96DT6 458 aa14.43□□□□□ -0.1
SHMT2-221ENST00000555773 SLC26A6Q9BXS9 759 aa14.43□□□□□ -0.1
SHMT2-221ENST00000555773 RABGAP1Q9Y3P9 1069 aa14.43□□□□□ -0.1
SHMT2-221ENST00000555773 CNTNAP5Q8WYK1 1306 aa14.42□□□□□ -0.1
SHMT2-221ENST00000555773 STK36Q9NRP7 1315 aa14.42□□□□□ -0.1
SHMT2-221ENST00000555773 PTPDC1A2A3K4 754 aa14.42□□□□□ -0.1
SHMT2-221ENST00000555773 hCG_1984214I3L0E3 225 aa14.42□□□□□ -0.1
SHMT2-221ENST00000555773 DEXIO95424 95 aa14.42□□□□□ -0.1
SHMT2-221ENST00000555773 HSP90AA1P07900 732 aaKnown RBP14.42□□□□□ -0.1
SHMT2-221ENST00000555773 TAF1CQ15572 869 aaPredicted RBP14.42□□□□□ -0.1
SHMT2-221ENST00000555773 CDC37Q16543 378 aaPredicted RBP14.42□□□□□ -0.1
SHMT2-221ENST00000555773 PFKFB3Q16875 520 aaPredicted RBP14.42□□□□□ -0.1
SHMT2-221ENST00000555773 SAMD1Q6SPF0 538 aaPredicted RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms