RNA–Protein interactions for RNA: ENST00000555763.1

NEK9-207, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-207ENST00000555763 CWC25Q9NXE8 425 aaPredicted RBP7.23□□□□□ -1.25
NEK9-207ENST00000555763 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.23□□□□□ -1.25
NEK9-207ENST00000555763 PCDHA11Q9Y5I1 949 aa7.23□□□□□ -1.25
NEK9-207ENST00000555763 BPTFQ12830 3046 aa7.23□□□□□ -1.25
NEK9-207ENST00000555763 TRIP12Q14669 1992 aaPredicted RBP7.22□□□□□ -1.25
NEK9-207ENST00000555763 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.22□□□□□ -1.25
NEK9-207ENST00000555763 PEX10O60683 326 aa7.22□□□□□ -1.25
NEK9-207ENST00000555763 LPXNO60711 386 aa7.22□□□□□ -1.25
NEK9-207ENST00000555763 HOXC6P09630 235 aa7.22□□□□□ -1.25
NEK9-207ENST00000555763 NUDT7P0C024 238 aa7.22□□□□□ -1.25
NEK9-207ENST00000555763 CSF2RAP15509 400 aa7.22□□□□□ -1.25
NEK9-207ENST00000555763 ERCC3P19447 782 aa7.22□□□□□ -1.25
NEK9-207ENST00000555763 RABGGTBP53611 331 aa7.22□□□□□ -1.25
NEK9-207ENST00000555763 PABPC4Q13310 644 aaKnown RBP eCLIP7.22□□□□□ -1.25
NEK9-207ENST00000555763 ST3GAL2Q16842 350 aa7.22□□□□□ -1.25
NEK9-207ENST00000555763 DGLUCYQ7Z3D6 616 aa7.22□□□□□ -1.25
NEK9-207ENST00000555763 CCDC84Q86UT8 332 aaPredicted RBP7.22□□□□□ -1.25
NEK9-207ENST00000555763 ATOH1Q92858 354 aaPredicted RBP7.22□□□□□ -1.25
NEK9-207ENST00000555763 MTIF3Q9H2K0 278 aaKnown RBP7.22□□□□□ -1.25
NEK9-207ENST00000555763 NOVA2Q9UNW9 492 aaKnown RBP7.22□□□□□ -1.25
NEK9-207ENST00000555763 RFX7Q2KHR2 1363 aa7.21□□□□□ -1.25
NEK9-207ENST00000555763 ROBO3Q96MS0 1386 aa7.21□□□□□ -1.25
NEK9-207ENST00000555763 WDFY3Q8IZQ1 3526 aa7.21□□□□□ -1.25
NEK9-207ENST00000555763 A0A1W2PQ45 241 aaPredicted RBP7.21□□□□□ -1.26
NEK9-207ENST00000555763 A0A1W2PQY0 241 aa7.21□□□□□ -1.26
NEK9-207ENST00000555763 PPP1R3GB7ZBB8 358 aa7.21□□□□□ -1.26
NEK9-207ENST00000555763 SEPT4O43236 478 aa7.21□□□□□ -1.26
NEK9-207ENST00000555763 TAF5LO75529 589 aa7.21□□□□□ -1.26
NEK9-207ENST00000555763 ACRP10323 421 aa7.21□□□□□ -1.26
NEK9-207ENST00000555763 CYP2C19P33261 490 aa7.21□□□□□ -1.26
NEK9-207ENST00000555763 NBL1P41271 181 aa7.21□□□□□ -1.26
NEK9-207ENST00000555763 ERVK-9P63128 1117 aa7.21□□□□□ -1.26
NEK9-207ENST00000555763 ERVK-24P63145 666 aa7.21□□□□□ -1.26
NEK9-207ENST00000555763 MAP3K10Q02779 954 aa7.21□□□□□ -1.26
NEK9-207ENST00000555763 NR6A1Q15406 480 aa7.21□□□□□ -1.26
NEK9-207ENST00000555763 HERC4Q5GLZ8 1057 aaPredicted RBP7.21□□□□□ -1.26
NEK9-207ENST00000555763 EPHA10Q5JZY3 1008 aa7.21□□□□□ -1.26
NEK9-207ENST00000555763 ANO1Q5XXA6 986 aa7.21□□□□□ -1.26
NEK9-207ENST00000555763 PTCRAQ6ISU1 281 aaPredicted RBP7.21□□□□□ -1.26
NEK9-207ENST00000555763 PLEKHH3Q7Z736 793 aa7.21□□□□□ -1.26
NEK9-207ENST00000555763 SLF2Q8IX21 1173 aa7.21□□□□□ -1.26
NEK9-207ENST00000555763 GPRC5AQ8NFJ5 357 aa7.21□□□□□ -1.26
NEK9-207ENST00000555763 RMDN1Q96DB5 314 aa7.21□□□□□ -1.26
NEK9-207ENST00000555763 MPHOSPH8Q99549 860 aa7.21□□□□□ -1.26
NEK9-207ENST00000555763 MYD88Q99836 296 aa7.21□□□□□ -1.26
NEK9-207ENST00000555763 BABAM1Q9NWV8 329 aa7.21□□□□□ -1.26
NEK9-207ENST00000555763 MYO10Q9HD67 2058 aa7.21□□□□□ -1.26
NEK9-207ENST00000555763 ZNF536O15090 1300 aa7.21□□□□□ -1.26
NEK9-207ENST00000555763 TRIM6-TRIM34B2RNG4 842 aa7.2□□□□□ -1.26
NEK9-207ENST00000555763 CA3P07451 260 aa7.2□□□□□ -1.26
NEK9-207ENST00000555763 ITGA6P23229 1130 aa7.2□□□□□ -1.26
NEK9-207ENST00000555763 HMGCS2P54868 508 aa7.2□□□□□ -1.26
NEK9-207ENST00000555763 NFIAQ12857 509 aa7.2□□□□□ -1.26
NEK9-207ENST00000555763 GRB10Q13322 594 aa7.2□□□□□ -1.26
NEK9-207ENST00000555763 FAM47AQ5JRC9 791 aa7.2□□□□□ -1.26
NEK9-207ENST00000555763 SUGP1Q8IWZ8 645 aaKnown RBP7.2□□□□□ -1.26
NEK9-207ENST00000555763 TMEM199Q8N511 208 aa7.2□□□□□ -1.26
NEK9-207ENST00000555763 PNMA1Q8ND90 353 aa7.2□□□□□ -1.26
NEK9-207ENST00000555763 EDC3Q96F86 508 aaKnown RBP7.2□□□□□ -1.26
NEK9-207ENST00000555763 FSD1Q9BTV5 496 aa7.2□□□□□ -1.26
NEK9-207ENST00000555763 MRIQ9BWK5 157 aa7.2□□□□□ -1.26
NEK9-207ENST00000555763 IL23AQ9NPF7 189 aa7.2□□□□□ -1.26
NEK9-207ENST00000555763 PRKAG3Q9UGI9 489 aa7.2□□□□□ -1.26
NEK9-207ENST00000555763 RALYQ9UKM9 306 aaKnown RBP7.2□□□□□ -1.26
NEK9-207ENST00000555763 MICAL3Q7RTP6 2002 aa7.2□□□□□ -1.26
NEK9-207ENST00000555763 NBEAQ8NFP9 2946 aa7.2□□□□□ -1.26
NEK9-207ENST00000555763 DCDC2CA8MYV0 355 aa7.19□□□□□ -1.26
NEK9-207ENST00000555763 SMAPO00193 183 aa7.19□□□□□ -1.26
NEK9-207ENST00000555763 PIK3CDO00329 1044 aa7.19□□□□□ -1.26
NEK9-207ENST00000555763 PER1O15534 1290 aaPredicted RBP7.19□□□□□ -1.26
NEK9-207ENST00000555763 CTNND1O60716 968 aaKnown RBP7.19□□□□□ -1.26
NEK9-207ENST00000555763 KCNA5P22460 613 aa7.19□□□□□ -1.26
NEK9-207ENST00000555763 IRS1P35568 1242 aa7.19□□□□□ -1.26
NEK9-207ENST00000555763 HERVK_113P62684 666 aa7.19□□□□□ -1.26
NEK9-207ENST00000555763 TCP10Q12799 353 aa7.19□□□□□ -1.26
NEK9-207ENST00000555763 KRT24Q2M2I5 525 aa7.19□□□□□ -1.26
NEK9-207ENST00000555763 Q3C1V9 767 aa7.19□□□□□ -1.26
NEK9-207ENST00000555763 PUS10Q3MIT2 529 aaKnown RBP7.19□□□□□ -1.26
NEK9-207ENST00000555763 CC2D1BQ5T0F9 858 aaKnown RBP7.19□□□□□ -1.26
NEK9-207ENST00000555763 ADGRD1Q6QNK2 874 aa7.19□□□□□ -1.26
NEK9-207ENST00000555763 HHIPL2Q6UWX4 724 aa7.19□□□□□ -1.26
NEK9-207ENST00000555763 FBXL6Q8N531 539 aa7.19□□□□□ -1.26
NEK9-207ENST00000555763 NPLOC4Q8TAT6 608 aa7.19□□□□□ -1.26
NEK9-207ENST00000555763 CERS4Q9HA82 394 aa7.19□□□□□ -1.26
NEK9-207ENST00000555763 HYPKQ9NX55 129 aa7.19□□□□□ -1.26
NEK9-207ENST00000555763 RBPJLQ9UBG7 517 aa7.19□□□□□ -1.26
NEK9-207ENST00000555763 MUTYHQ9UIF7 546 aa7.19□□□□□ -1.26
NEK9-207ENST00000555763 NUDCQ9Y266 331 aa7.19□□□□□ -1.26
NEK9-207ENST00000555763 MAST3O60307 1309 aa7.19□□□□□ -1.26
NEK9-207ENST00000555763 TMEM221A6NGB7 291 aa7.18□□□□□ -1.26
NEK9-207ENST00000555763 SOWAHDA6NJG2 315 aa7.18□□□□□ -1.26
NEK9-207ENST00000555763 M0R296 226 aa7.18□□□□□ -1.26
NEK9-207ENST00000555763 ARHGEF15O94989 841 aa7.18□□□□□ -1.26
NEK9-207ENST00000555763 HOXB7P09629 217 aa7.18□□□□□ -1.26
NEK9-207ENST00000555763 ZNF16P17020 682 aaPredicted RBP7.18□□□□□ -1.26
NEK9-207ENST00000555763 CDK11BP21127 795 aaKnown RBP7.18□□□□□ -1.26
NEK9-207ENST00000555763 ARID4AP29374 1257 aaPredicted RBP7.18□□□□□ -1.26
NEK9-207ENST00000555763 HOXA7P31268 230 aaPredicted RBP7.18□□□□□ -1.26
NEK9-207ENST00000555763 VCPP55072 806 aaKnown RBP7.18□□□□□ -1.26
NEK9-207ENST00000555763 IRX3P78415 501 aaPredicted RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms