RNA–Protein interactions for RNA: ENST00000555759.1

SYNE3-204, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 2

Gene SYNE3, Length 5,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-204ENST00000555759 VPS54Q9P1Q0 977 aa19.24■□□□□ 0.67
SYNE3-204ENST00000555759 ADCK5Q3MIX3 580 aa19.24■□□□□ 0.67
SYNE3-204ENST00000555759 PLXNC1O60486 1568 aa19.23■□□□□ 0.67
SYNE3-204ENST00000555759 ZMYND10O75800 440 aa19.23■□□□□ 0.67
SYNE3-204ENST00000555759 LONP1P36776 959 aaKnown RBP19.23■□□□□ 0.67
SYNE3-204ENST00000555759 ADCY8P40145 1251 aa19.23■□□□□ 0.67
SYNE3-204ENST00000555759 NSUN7Q8NE18 718 aaKnown RBP19.23■□□□□ 0.67
SYNE3-204ENST00000555759 DNM3Q9UQ16 869 aa19.23■□□□□ 0.67
SYNE3-204ENST00000555759 SOWAHDA6NJG2 315 aa19.23■□□□□ 0.67
SYNE3-204ENST00000555759 CTTNBP2Q8WZ74 1663 aa19.23■□□□□ 0.67
SYNE3-204ENST00000555759 CARMIL3Q8ND23 1372 aa19.23■□□□□ 0.67
SYNE3-204ENST00000555759 KDM3AQ9Y4C1 1321 aa19.23■□□□□ 0.67
SYNE3-204ENST00000555759 POLE2P56282 527 aa19.23■□□□□ 0.67
SYNE3-204ENST00000555759 ZNF804AQ7Z570 1209 aa19.23■□□□□ 0.67
SYNE3-204ENST00000555759 KLHDC4Q8TBB5 520 aa19.23■□□□□ 0.67
SYNE3-204ENST00000555759 PBKQ96KB5 322 aa19.23■□□□□ 0.67
SYNE3-204ENST00000555759 BPIFA3Q9BQP9 254 aa19.23■□□□□ 0.67
SYNE3-204ENST00000555759 TUBGCP2Q9BSJ2 902 aa19.23■□□□□ 0.67
SYNE3-204ENST00000555759 SMTNP53814 917 aa19.23■□□□□ 0.67
SYNE3-204ENST00000555759 C2orf54Q08AI8 447 aa19.23■□□□□ 0.67
SYNE3-204ENST00000555759 ANKRD35Q8N283 1001 aa19.23■□□□□ 0.67
SYNE3-204ENST00000555759 GCC2Q8IWJ2 1684 aa19.23■□□□□ 0.67
SYNE3-204ENST00000555759 LAMC3Q9Y6N6 1575 aa19.23■□□□□ 0.67
SYNE3-204ENST00000555759 STK10O94804 968 aaKnown RBP19.22■□□□□ 0.67
SYNE3-204ENST00000555759 LMNAP02545 664 aaKnown RBP19.22■□□□□ 0.67
SYNE3-204ENST00000555759 STMN1P16949 149 aa19.22■□□□□ 0.67
SYNE3-204ENST00000555759 SNX16P57768 344 aa19.22■□□□□ 0.67
SYNE3-204ENST00000555759 GOLGA8FQ08AF8 430 aa19.22■□□□□ 0.67
SYNE3-204ENST00000555759 GOLGA8DPQ0D2H9 430 aa19.22■□□□□ 0.67
SYNE3-204ENST00000555759 PLS1Q14651 629 aa19.22■□□□□ 0.67
SYNE3-204ENST00000555759 MPHOSPH6Q99547 160 aaKnown RBP19.22■□□□□ 0.67
SYNE3-204ENST00000555759 CUEDC2Q9H467 287 aa19.22■□□□□ 0.67
SYNE3-204ENST00000555759 IFNAR2P48551 515 aa19.22■□□□□ 0.67
SYNE3-204ENST00000555759 GCKRQ14397 625 aa19.22■□□□□ 0.67
SYNE3-204ENST00000555759 DCAF5Q96JK2 942 aa19.22■□□□□ 0.67
SYNE3-204ENST00000555759 PGRMC1O00264 195 aaKnown RBP19.22■□□□□ 0.67
SYNE3-204ENST00000555759 RESTQ13127 1097 aa19.22■□□□□ 0.67
SYNE3-204ENST00000555759 BIRC3Q13489 604 aa19.22■□□□□ 0.67
SYNE3-204ENST00000555759 PALM2Q8IXS6 379 aa19.22■□□□□ 0.67
SYNE3-204ENST00000555759 CCDC89Q8N998 374 aa19.22■□□□□ 0.67
SYNE3-204ENST00000555759 DHTKD1Q96HY7 919 aaPredicted RBP19.22■□□□□ 0.67
SYNE3-204ENST00000555759 NDUFA10O95299 355 aa19.22■□□□□ 0.67
SYNE3-204ENST00000555759 GYS2P54840 703 aa19.22■□□□□ 0.67
SYNE3-204ENST00000555759 CUL1Q13616 776 aa19.22■□□□□ 0.67
SYNE3-204ENST00000555759 ZNF654Q8IZM8 581 aa19.22■□□□□ 0.67
SYNE3-204ENST00000555759 CCT6BQ92526 530 aa19.22■□□□□ 0.67
SYNE3-204ENST00000555759 ZCRB1Q8TBF4 217 aaKnown RBP19.21■□□□□ 0.67
SYNE3-204ENST00000555759 PHF23Q9BUL5 403 aaPredicted RBP19.21■□□□□ 0.67
SYNE3-204ENST00000555759 DAAM1Q9Y4D1 1078 aa19.21■□□□□ 0.67
SYNE3-204ENST00000555759 EXOC5O00471 708 aa19.21■□□□□ 0.67
SYNE3-204ENST00000555759 MAP3K7O43318 606 aa19.21■□□□□ 0.67
SYNE3-204ENST00000555759 HSPD1P10809 573 aaKnown RBP19.21■□□□□ 0.67
SYNE3-204ENST00000555759 RASSF7Q02833 373 aa19.21■□□□□ 0.67
SYNE3-204ENST00000555759 DYNC1I2Q13409 638 aaKnown RBP19.21■□□□□ 0.67
SYNE3-204ENST00000555759 NELFCDQ8IXH7 590 aa19.21■□□□□ 0.67
SYNE3-204ENST00000555759 ACRBPQ8NEB7 543 aa19.21■□□□□ 0.67
SYNE3-204ENST00000555759 HAUS7Q99871 368 aa19.21■□□□□ 0.67
SYNE3-204ENST00000555759 KDM5AP29375 1690 aaKnown RBP19.21■□□□□ 0.67
SYNE3-204ENST00000555759 MAP3K19Q56UN5 1328 aa19.21■□□□□ 0.67
SYNE3-204ENST00000555759 TAF5LO75529 589 aa19.21■□□□□ 0.67
SYNE3-204ENST00000555759 NFATC2IPQ8NCF5 419 aa19.21■□□□□ 0.67
SYNE3-204ENST00000555759 FOXP1Q9H334 677 aaPredicted RBP19.21■□□□□ 0.67
SYNE3-204ENST00000555759 DNAJC8O75937 253 aaPredicted RBP19.21■□□□□ 0.67
SYNE3-204ENST00000555759 ATF2P15336 505 aa19.21■□□□□ 0.67
SYNE3-204ENST00000555759 ADCY7P51828 1080 aa19.21■□□□□ 0.67
SYNE3-204ENST00000555759 HSPA6P17066 643 aa19.21■□□□□ 0.67
SYNE3-204ENST00000555759 FAM133BQ5BKY9 247 aaKnown RBP19.21■□□□□ 0.67
SYNE3-204ENST00000555759 METTL14Q9HCE5 456 aaKnown RBP19.21■□□□□ 0.67
SYNE3-204ENST00000555759 MAN1B1Q9UKM7 699 aa19.21■□□□□ 0.67
SYNE3-204ENST00000555759 EXOC3O60645 756 aa19.2■□□□□ 0.66
SYNE3-204ENST00000555759 ZSCAN20P17040 1043 aaPredicted RBP19.2■□□□□ 0.66
SYNE3-204ENST00000555759 HOXC9P31274 260 aa19.2■□□□□ 0.66
SYNE3-204ENST00000555759 POLR2FP61218 127 aaKnown RBP19.2■□□□□ 0.66
SYNE3-204ENST00000555759 ARHGEF25Q86VW2 580 aa19.2■□□□□ 0.66
SYNE3-204ENST00000555759 CENPKQ9BS16 269 aa19.2■□□□□ 0.66
SYNE3-204ENST00000555759 ANGPTL2Q9UKU9 493 aa19.2■□□□□ 0.66
SYNE3-204ENST00000555759 ARMC2Q8NEN0 867 aa19.2■□□□□ 0.66
SYNE3-204ENST00000555759 SYMPKQ92797 1274 aaKnown RBP19.2■□□□□ 0.66
SYNE3-204ENST00000555759 KIFC2Q96AC6 838 aa19.2■□□□□ 0.66
SYNE3-204ENST00000555759 SEMA3EO15041 775 aa19.2■□□□□ 0.66
SYNE3-204ENST00000555759 CREB3O43889 395 aa19.2■□□□□ 0.66
SYNE3-204ENST00000555759 ZBED6P86452 979 aa19.2■□□□□ 0.66
SYNE3-204ENST00000555759 CTDSPL2Q05D32 466 aa19.2■□□□□ 0.66
SYNE3-204ENST00000555759 GALNT17Q6IS24 598 aa19.2■□□□□ 0.66
SYNE3-204ENST00000555759 CNOT6LQ96LI5 555 aaKnown RBP19.2■□□□□ 0.66
SYNE3-204ENST00000555759 ANKRD2Q9GZV1 360 aa19.2■□□□□ 0.66
SYNE3-204ENST00000555759 ARMCX3Q9UH62 379 aaPredicted RBP19.2■□□□□ 0.66
SYNE3-204ENST00000555759 EAF2Q96CJ1 260 aaPredicted RBP19.2■□□□□ 0.66
SYNE3-204ENST00000555759 HVCN1Q96D96 273 aa19.2■□□□□ 0.66
SYNE3-204ENST00000555759 MYL1P05976 194 aa19.19■□□□□ 0.66
SYNE3-204ENST00000555759 HOXA7P31268 230 aaPredicted RBP19.19■□□□□ 0.66
SYNE3-204ENST00000555759 GPIHBP1Q8IV16 184 aa19.19■□□□□ 0.66
SYNE3-204ENST00000555759 HELBQ8NG08 1087 aaPredicted RBP19.19■□□□□ 0.66
SYNE3-204ENST00000555759 NLRP3Q96P20 1036 aa19.19■□□□□ 0.66
SYNE3-204ENST00000555759 PSMD1Q99460 953 aa19.19■□□□□ 0.66
SYNE3-204ENST00000555759 DCUN1D2Q6PH85 259 aa19.19■□□□□ 0.66
SYNE3-204ENST00000555759 BTBD18B2RXH4 712 aa19.19■□□□□ 0.66
SYNE3-204ENST00000555759 LDHBP07195 334 aaKnown RBP19.19■□□□□ 0.66
SYNE3-204ENST00000555759 ADD1P35611 737 aaKnown RBP19.19■□□□□ 0.66
SYNE3-204ENST00000555759 STRN3Q13033 797 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms