RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 HSPD1P10809 573 aaKnown RBP28.96■■■□□ 2.23
PRKCH-216ENST00000555542 BMP3P12645 472 aa28.96■■■□□ 2.23
PRKCH-216ENST00000555542 SDSP20132 328 aa28.96■■■□□ 2.23
PRKCH-216ENST00000555542 IRX6P78412 446 aaPredicted RBP28.96■■■□□ 2.23
PRKCH-216ENST00000555542 IKQ13123 557 aaPredicted RBP28.96■■■□□ 2.23
PRKCH-216ENST00000555542 RRP12Q5JTH9 1297 aaKnown RBP28.96■■■□□ 2.23
PRKCH-216ENST00000555542 CHRDL2Q6WN34 429 aa28.96■■■□□ 2.23
PRKCH-216ENST00000555542 ZNF589Q86UQ0 364 aaPredicted RBP28.96■■■□□ 2.23
PRKCH-216ENST00000555542 REPS2Q8NFH8 660 aa28.96■■■□□ 2.23
PRKCH-216ENST00000555542 CHMP4CQ96CF2 233 aa28.96■■■□□ 2.23
PRKCH-216ENST00000555542 PGK2P07205 417 aa28.95■■■□□ 2.22
PRKCH-216ENST00000555542 MNX1P50219 401 aaPredicted RBP28.95■■■□□ 2.22
PRKCH-216ENST00000555542 MAML3Q96JK9 1138 aa28.95■■■□□ 2.22
PRKCH-216ENST00000555542 DIAPH3Q9NSV4 1193 aa28.95■■■□□ 2.22
PRKCH-216ENST00000555542 ALPK3Q96L96 1907 aa28.94■■■□□ 2.22
PRKCH-216ENST00000555542 CYBAP13498 195 aa28.94■■■□□ 2.22
PRKCH-216ENST00000555542 SLC1A4P43007 532 aa28.94■■■□□ 2.22
PRKCH-216ENST00000555542 C7orf61Q8IZ16 206 aa28.94■■■□□ 2.22
PRKCH-216ENST00000555542 ORC4O43929 436 aa28.93■■■□□ 2.22
PRKCH-216ENST00000555542 NMT2O60551 498 aa28.93■■■□□ 2.22
PRKCH-216ENST00000555542 TRPV1Q8NER1 839 aa28.93■■■□□ 2.22
PRKCH-216ENST00000555542 MTMR7Q9Y216 660 aa28.93■■■□□ 2.22
PRKCH-216ENST00000555542 PLXNA1Q9UIW2 1896 aa28.93■■■□□ 2.22
PRKCH-216ENST00000555542 TMEM232C9JQI7 657 aa28.92■■■□□ 2.22
PRKCH-216ENST00000555542 STAT2P52630 851 aa28.92■■■□□ 2.22
PRKCH-216ENST00000555542 HAND2P61296 217 aa28.92■■■□□ 2.22
PRKCH-216ENST00000555542 CWC27Q6UX04 472 aaKnown RBP28.92■■■□□ 2.22
PRKCH-216ENST00000555542 RAVER2Q9HCJ3 691 aaKnown RBP28.92■■■□□ 2.22
PRKCH-216ENST00000555542 ZMYM6O95789 1325 aa28.92■■■□□ 2.22
PRKCH-216ENST00000555542 HIP1O00291 1037 aa28.91■■■□□ 2.22
PRKCH-216ENST00000555542 MCCP23508 829 aa28.91■■■□□ 2.22
PRKCH-216ENST00000555542 DDX11Q96FC9 970 aa28.91■■■□□ 2.22
PRKCH-216ENST00000555542 GMCL1Q96IK5 515 aa28.91■■■□□ 2.22
PRKCH-216ENST00000555542 SLC38A10Q9HBR0 1119 aa28.91■■■□□ 2.22
PRKCH-216ENST00000555542 IL17RBQ9NRM6 502 aa28.91■■■□□ 2.22
PRKCH-216ENST00000555542 PRAMEF19Q5SWL8 479 aa28.9■■■□□ 2.22
PRKCH-216ENST00000555542 FAM160B2Q86V87 743 aa28.9■■■□□ 2.22
PRKCH-216ENST00000555542 CHURC1Q8WUH1 139 aa28.9■■■□□ 2.22
PRKCH-216ENST00000555542 RIPK3Q9Y572 518 aa28.9■■■□□ 2.22
PRKCH-216ENST00000555542 TACC3Q9Y6A5 838 aa28.9■■■□□ 2.22
PRKCH-216ENST00000555542 PFASO15067 1338 aa28.9■■■□□ 2.22
PRKCH-216ENST00000555542 ATP2A1O14983 1001 aa28.89■■■□□ 2.22
PRKCH-216ENST00000555542 IGHA2P01877 340 aa28.89■■■□□ 2.22
PRKCH-216ENST00000555542 MYCNP04198 464 aaPredicted RBP28.89■■■□□ 2.22
PRKCH-216ENST00000555542 ANO1Q5XXA6 986 aa28.89■■■□□ 2.22
PRKCH-216ENST00000555542 DIS3Q9Y2L1 958 aaKnown RBP28.89■■■□□ 2.22
PRKCH-216ENST00000555542 SEPT4O43236 478 aa28.88■■■□□ 2.21
PRKCH-216ENST00000555542 ZNF792Q3KQV3 632 aa28.88■■■□□ 2.21
PRKCH-216ENST00000555542 MFSD6Q6ZSS7 791 aa28.88■■■□□ 2.21
PRKCH-216ENST00000555542 KCTD1Q719H9 257 aa28.88■■■□□ 2.21
PRKCH-216ENST00000555542 CEP290O15078 2479 aa28.87■■■□□ 2.21
PRKCH-216ENST00000555542 FGRP09769 529 aa28.87■■■□□ 2.21
PRKCH-216ENST00000555542 FDX1P10109 184 aa28.87■■■□□ 2.21
PRKCH-216ENST00000555542 COL6A1P12109 1028 aa28.87■■■□□ 2.21
PRKCH-216ENST00000555542 OAZ1P54368 228 aa28.87■■■□□ 2.21
PRKCH-216ENST00000555542 CCDC96Q2M329 555 aa28.87■■■□□ 2.21
PRKCH-216ENST00000555542 STAG1Q8WVM7 1258 aa28.87■■■□□ 2.21
PRKCH-216ENST00000555542 TINF2Q9BSI4 451 aa28.87■■■□□ 2.21
PRKCH-216ENST00000555542 SENP6Q9GZR1 1112 aaPredicted RBP28.87■■■□□ 2.21
PRKCH-216ENST00000555542 RBM27Q9P2N5 1060 aaKnown RBP28.87■■■□□ 2.21
PRKCH-216ENST00000555542 FBXO40Q9UH90 709 aa28.87■■■□□ 2.21
PRKCH-216ENST00000555542 AKNAD1Q5T1N1 836 aa28.86■■■□□ 2.21
PRKCH-216ENST00000555542 RCSD1Q6JBY9 416 aa28.86■■■□□ 2.21
PRKCH-216ENST00000555542 ANKRD35Q8N283 1001 aa28.86■■■□□ 2.21
PRKCH-216ENST00000555542 ARRDC4Q8NCT1 418 aa28.86■■■□□ 2.21
PRKCH-216ENST00000555542 RNF41Q9H4P4 317 aaPredicted RBP28.86■■■□□ 2.21
PRKCH-216ENST00000555542 HOMER2Q9NSB8 354 aa28.86■■■□□ 2.21
PRKCH-216ENST00000555542 ZMYND8Q9ULU4 1186 aaPredicted RBP28.86■■■□□ 2.21
PRKCH-216ENST00000555542 KBTBD13C9JR72 458 aa28.85■■■□□ 2.21
PRKCH-216ENST00000555542 DNM1LO00429 736 aa28.85■■■□□ 2.21
PRKCH-216ENST00000555542 ZNF213O14771 459 aa28.85■■■□□ 2.21
PRKCH-216ENST00000555542 PCP11498 1178 aaKnown RBP28.85■■■□□ 2.21
PRKCH-216ENST00000555542 GJC2Q5T442 439 aaPredicted RBP28.85■■■□□ 2.21
PRKCH-216ENST00000555542 CNPY2Q9Y2B0 182 aa28.85■■■□□ 2.21
PRKCH-216ENST00000555542 CHST13Q8NET6 341 aa28.84■■■□□ 2.21
PRKCH-216ENST00000555542 NRBP1Q9UHY1 535 aa28.84■■■□□ 2.21
PRKCH-216ENST00000555542 TOP1P11387 765 aaKnown RBP28.83■■■□□ 2.21
PRKCH-216ENST00000555542 SYN1P17600 705 aa28.83■■■□□ 2.21
PRKCH-216ENST00000555542 RASGRP2Q7LDG7 609 aa28.83■■■□□ 2.21
PRKCH-216ENST00000555542 TBC1D10CQ8IV04 446 aa28.83■■■□□ 2.21
PRKCH-216ENST00000555542 DCAF4Q8WV16 495 aa28.83■■■□□ 2.21
PRKCH-216ENST00000555542 RARBP10826 455 aa28.82■■■□□ 2.2
PRKCH-216ENST00000555542 LRRC26Q2I0M4 334 aa28.82■■■□□ 2.2
PRKCH-216ENST00000555542 CCDC174Q6PII3 467 aa28.82■■■□□ 2.2
PRKCH-216ENST00000555542 TCP11L1Q9NUJ3 509 aa28.82■■■□□ 2.2
PRKCH-216ENST00000555542 LAMA4Q16363 1823 aa28.81■■■□□ 2.2
PRKCH-216ENST00000555542 PLA2G6O60733 806 aa28.81■■■□□ 2.2
PRKCH-216ENST00000555542 PDE4AP27815 886 aa28.81■■■□□ 2.2
PRKCH-216ENST00000555542 ATN1P54259 1190 aaPredicted RBP28.81■■■□□ 2.2
PRKCH-216ENST00000555542 MSL3Q8N5Y2 521 aaKnown RBP28.81■■■□□ 2.2
PRKCH-216ENST00000555542 ESR2Q92731 530 aa28.81■■■□□ 2.2
PRKCH-216ENST00000555542 TMEM47Q9BQJ4 181 aa28.81■■■□□ 2.2
PRKCH-216ENST00000555542 ACAD9Q9H845 621 aa28.81■■■□□ 2.2
PRKCH-216ENST00000555542 PRR12Q9ULL5 1215 aa28.81■■■□□ 2.2
PRKCH-216ENST00000555542 NOVP48745 357 aa28.8■■■□□ 2.2
PRKCH-216ENST00000555542 FXR1P51114 621 aaKnown RBP eCLIP28.8■■■□□ 2.2
PRKCH-216ENST00000555542 SNAP25P60880 206 aa28.8■■■□□ 2.2
PRKCH-216ENST00000555542 TTC22Q5TAA0 569 aa28.8■■■□□ 2.2
PRKCH-216ENST00000555542 AGBL1Q96MI9 1066 aa28.8■■■□□ 2.2
PRKCH-216ENST00000555542 RNF146Q9NTX7 359 aa28.8■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms