RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 LIG3P49916 1009 aa6.49□□□□□ -1.37
SRP54-207ENST00000555535 CYP4F8P98187 520 aa6.49□□□□□ -1.37
SRP54-207ENST00000555535 FMR1Q06787 632 aaKnown RBP eCLIP6.49□□□□□ -1.37
SRP54-207ENST00000555535 HSF5Q4G112 596 aaPredicted RBP6.49□□□□□ -1.37
SRP54-207ENST00000555535 ZC3H14Q6PJT7 736 aaKnown RBP6.49□□□□□ -1.37
SRP54-207ENST00000555535 FERMT3Q86UX7 667 aa6.49□□□□□ -1.37
SRP54-207ENST00000555535 TNFRSF12AQ9NP84 129 aa6.49□□□□□ -1.37
SRP54-207ENST00000555535 BIN2Q9UBW5 565 aaPredicted RBP6.49□□□□□ -1.37
SRP54-207ENST00000555535 SUSD2Q9UGT4 822 aa6.49□□□□□ -1.37
SRP54-207ENST00000555535 A0A1W2PQ45 241 aaPredicted RBP6.48□□□□□ -1.37
SRP54-207ENST00000555535 A0A1W2PQY0 241 aa6.48□□□□□ -1.37
SRP54-207ENST00000555535 SH3D21A4FU49 640 aa6.48□□□□□ -1.37
SRP54-207ENST00000555535 FADS2P1A8MWK0 482 aa6.48□□□□□ -1.37
SRP54-207ENST00000555535 CYR61O00622 381 aa6.48□□□□□ -1.37
SRP54-207ENST00000555535 MSL3P1P0C860 447 aa6.48□□□□□ -1.37
SRP54-207ENST00000555535 NCKAP1LP55160 1127 aa6.48□□□□□ -1.37
SRP54-207ENST00000555535 CCDC84Q86UT8 332 aaPredicted RBP6.48□□□□□ -1.37
SRP54-207ENST00000555535 ZSCAN29Q8IWY8 852 aaPredicted RBP6.48□□□□□ -1.37
SRP54-207ENST00000555535 SAMD11Q96NU1 681 aa6.48□□□□□ -1.37
SRP54-207ENST00000555535 MENTQ9BUN1 341 aa6.48□□□□□ -1.37
SRP54-207ENST00000555535 GJA9P57773 515 aa6.47□□□□□ -1.37
SRP54-207ENST00000555535 VWA3BQ502W6 1294 aa6.47□□□□□ -1.37
SRP54-207ENST00000555535 RPTNQ6XPR3 784 aa6.47□□□□□ -1.37
SRP54-207ENST00000555535 SLITRK6Q9H5Y7 841 aa6.47□□□□□ -1.37
SRP54-207ENST00000555535 ACSL6Q9UKU0 697 aa6.47□□□□□ -1.37
SRP54-207ENST00000555535 BPNT1O95861 308 aa6.46□□□□□ -1.38
SRP54-207ENST00000555535 SYPP08247 313 aa6.46□□□□□ -1.38
SRP54-207ENST00000555535 PRKCAP17252 672 aa6.46□□□□□ -1.38
SRP54-207ENST00000555535 LIMS1P48059 325 aa6.46□□□□□ -1.38
SRP54-207ENST00000555535 PLEKHN1Q494U1 663 aaPredicted RBP6.46□□□□□ -1.38
SRP54-207ENST00000555535 SAPCD2Q86UD0 394 aa6.46□□□□□ -1.38
SRP54-207ENST00000555535 FNIP1Q8TF40 1166 aa6.46□□□□□ -1.38
SRP54-207ENST00000555535 SPATA25Q9BR10 227 aa6.46□□□□□ -1.38
SRP54-207ENST00000555535 MRIQ9BWK5 157 aa6.46□□□□□ -1.38
SRP54-207ENST00000555535 CORINQ9Y5Q5 1042 aa6.46□□□□□ -1.38
SRP54-207ENST00000555535 CNR2P34972 360 aa6.45□□□□□ -1.38
SRP54-207ENST00000555535 PDE4CQ08493 712 aa6.45□□□□□ -1.38
SRP54-207ENST00000555535 BBS9Q3SYG4 887 aa6.45□□□□□ -1.38
SRP54-207ENST00000555535 USP51Q70EK9 711 aa6.45□□□□□ -1.38
SRP54-207ENST00000555535 LSRQ86X29 649 aaPredicted RBP6.45□□□□□ -1.38
SRP54-207ENST00000555535 PHACTR4Q8IZ21 702 aa6.45□□□□□ -1.38
SRP54-207ENST00000555535 RNF38Q9H0F5 515 aa6.45□□□□□ -1.38
SRP54-207ENST00000555535 GPR55Q9Y2T6 319 aaPredicted RBP6.45□□□□□ -1.38
SRP54-207ENST00000555535 PMF1-BGLAPU3KQ54 211 aa6.45□□□□□ -1.38
SRP54-207ENST00000555535 FKTNO75072 461 aa6.44□□□□□ -1.38
SRP54-207ENST00000555535 C6P13671 934 aa6.44□□□□□ -1.38
SRP54-207ENST00000555535 ZNF20P17024 532 aa6.44□□□□□ -1.38
SRP54-207ENST00000555535 TACR2P21452 398 aa6.44□□□□□ -1.38
SRP54-207ENST00000555535 EIF4BP23588 611 aaKnown RBP6.44□□□□□ -1.38
SRP54-207ENST00000555535 GBP1P32455 592 aa6.44□□□□□ -1.38
SRP54-207ENST00000555535 SLCO6A1Q86UG4 719 aa6.44□□□□□ -1.38
SRP54-207ENST00000555535 NUP43Q8NFH3 380 aa6.44□□□□□ -1.38
SRP54-207ENST00000555535 JARID2Q92833 1246 aaPredicted RBP6.44□□□□□ -1.38
SRP54-207ENST00000555535 RBM15Q96T37 977 aaKnown RBP eCLIP6.44□□□□□ -1.38
SRP54-207ENST00000555535 LNPKQ9C0E8 428 aa6.44□□□□□ -1.38
SRP54-207ENST00000555535 C1orf115Q9H7X2 142 aa6.44□□□□□ -1.38
SRP54-207ENST00000555535 PRR36Q9H6K5 1346 aa6.44□□□□□ -1.38
SRP54-207ENST00000555535 NOBOXO60393 691 aa6.43□□□□□ -1.38
SRP54-207ENST00000555535 TFE3P19532 575 aaPredicted RBP6.43□□□□□ -1.38
SRP54-207ENST00000555535 FOXO4P98177 505 aa6.43□□□□□ -1.38
SRP54-207ENST00000555535 ZNF200P98182 395 aaPredicted RBP6.43□□□□□ -1.38
SRP54-207ENST00000555535 FAN1Q9Y2M0 1017 aa6.43□□□□□ -1.38
SRP54-207ENST00000555535 HTRA3P83110 453 aa6.42□□□□□ -1.38
SRP54-207ENST00000555535 DDX1Q92499 740 aaKnown RBP6.42□□□□□ -1.38
SRP54-207ENST00000555535 LOXL4Q96JB6 756 aa6.42□□□□□ -1.38
SRP54-207ENST00000555535 KRTAP3-1Q9BYR8 98 aa6.42□□□□□ -1.38
SRP54-207ENST00000555535 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.42□□□□□ -1.38
SRP54-207ENST00000555535 REV1Q9UBZ9 1251 aa6.42□□□□□ -1.38
SRP54-207ENST00000555535 MLECQ14165 292 aa6.41□□□□□ -1.38
SRP54-207ENST00000555535 MAP3K11Q16584 847 aa6.41□□□□□ -1.38
SRP54-207ENST00000555535 ZPBP2Q6X784 338 aa6.41□□□□□ -1.38
SRP54-207ENST00000555535 AEBP1Q8IUX7 1158 aa6.41□□□□□ -1.38
SRP54-207ENST00000555535 CARFQ8N187 725 aa6.41□□□□□ -1.38
SRP54-207ENST00000555535 RETREG2Q8NC44 543 aa6.41□□□□□ -1.38
SRP54-207ENST00000555535 DVL3Q92997 716 aaPredicted RBP6.41□□□□□ -1.38
SRP54-207ENST00000555535 SETDB2Q96T68 719 aa6.41□□□□□ -1.38
SRP54-207ENST00000555535 KLHL3Q9UH77 587 aa6.41□□□□□ -1.38
SRP54-207ENST00000555535 WWC3Q9ULE0 1092 aa6.41□□□□□ -1.38
SRP54-207ENST00000555535 A0A1W2PQ27 194 aa6.4□□□□□ -1.38
SRP54-207ENST00000555535 A0A1W2PQ64 194 aa6.4□□□□□ -1.38
SRP54-207ENST00000555535 A0A1W2PQC6 194 aa6.4□□□□□ -1.38
SRP54-207ENST00000555535 A0A1W2PQD8 194 aa6.4□□□□□ -1.38
SRP54-207ENST00000555535 CHURC1-FNTBB4DL54 471 aa6.4□□□□□ -1.38
SRP54-207ENST00000555535 RGS13O14921 159 aa6.4□□□□□ -1.38
SRP54-207ENST00000555535 PLA2G1BP04054 148 aaKnown RBP6.4□□□□□ -1.38
SRP54-207ENST00000555535 CYBBP04839 570 aa6.4□□□□□ -1.38
SRP54-207ENST00000555535 RAD51AP2Q09MP3 1159 aa6.4□□□□□ -1.38
SRP54-207ENST00000555535 KIR3DS1Q14943 382 aa6.4□□□□□ -1.38
SRP54-207ENST00000555535 NBPF9Q3BBW0 867 aa6.4□□□□□ -1.38
SRP54-207ENST00000555535 PAQR3Q6TCH7 311 aa6.4□□□□□ -1.38
SRP54-207ENST00000555535 ADGRG2Q8IZP9 1017 aa6.4□□□□□ -1.38
SRP54-207ENST00000555535 CHST13Q8NET6 341 aa6.4□□□□□ -1.38
SRP54-207ENST00000555535 C8orf49Q96NF6 230 aa6.4□□□□□ -1.38
SRP54-207ENST00000555535 KIF2CQ99661 725 aa6.4□□□□□ -1.38
SRP54-207ENST00000555535 SCAND2PQ9GZW5 306 aaPredicted RBP6.4□□□□□ -1.38
SRP54-207ENST00000555535 ERVK13-1Q9NX77 482 aa6.4□□□□□ -1.38
SRP54-207ENST00000555535 DUSP10Q9Y6W6 482 aa6.4□□□□□ -1.38
SRP54-207ENST00000555535 A0A1B0GTL3 188 aa6.39□□□□□ -1.39
SRP54-207ENST00000555535 SRGAP3O43295 1099 aa6.39□□□□□ -1.39
SRP54-207ENST00000555535 SIGLEC6O43699 453 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms