RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 DBNDD1Q9H9R9 158 aa27.59■■■□□ 2.01
TMEM260-207ENST00000555497 DACH1Q9UI36 760 aa27.59■■■□□ 2.01
TMEM260-207ENST00000555497 MYH8P13535 1937 aa27.59■■■□□ 2.01
TMEM260-207ENST00000555497 MYO1BO43795 1136 aa27.59■■■□□ 2.01
TMEM260-207ENST00000555497 IGKV6D-41A0A0C4DH26 115 aa27.58■■■□□ 2.01
TMEM260-207ENST00000555497 SLURP2P0DP57 97 aa27.58■■■□□ 2.01
TMEM260-207ENST00000555497 PDHBP11177 359 aa27.58■■■□□ 2.01
TMEM260-207ENST00000555497 PIGSQ96S52 555 aa27.58■■■□□ 2.01
TMEM260-207ENST00000555497 FRMPD2Q68DX3 1309 aaPredicted RBP27.58■■■□□ 2.01
TMEM260-207ENST00000555497 CBFA2T2O43439 604 aa27.57■■■□□ 2
TMEM260-207ENST00000555497 NAPAP54920 295 aa27.57■■■□□ 2
TMEM260-207ENST00000555497 EIF6P56537 245 aaKnown RBP27.57■■■□□ 2
TMEM260-207ENST00000555497 TPD52L1Q16890 204 aaPredicted RBP27.57■■■□□ 2
TMEM260-207ENST00000555497 ZNF772Q68DY9 489 aaPredicted RBP27.57■■■□□ 2
TMEM260-207ENST00000555497 IQUBQ8NA54 791 aa27.57■■■□□ 2
TMEM260-207ENST00000555497 LRRC47Q8N1G4 583 aaKnown RBP27.57■■■□□ 2
TMEM260-207ENST00000555497 CCDC150Q8NCX0 1101 aa27.57■■■□□ 2
TMEM260-207ENST00000555497 RRP36Q96EU6 259 aaKnown RBP27.57■■■□□ 2
TMEM260-207ENST00000555497 CCDC34Q96HJ3 373 aa27.57■■■□□ 2
TMEM260-207ENST00000555497 BLZF1Q9H2G9 400 aa27.57■■■□□ 2
TMEM260-207ENST00000555497 SAMSN1Q9NSI8 373 aaKnown RBP27.57■■■□□ 2
TMEM260-207ENST00000555497 PCDHAC2Q9Y5I4 1007 aa27.57■■■□□ 2
TMEM260-207ENST00000555497 G3V3G9 751 aa27.56■■■□□ 2
TMEM260-207ENST00000555497 LONP1P36776 959 aaKnown RBP27.56■■■□□ 2
TMEM260-207ENST00000555497 NFIAQ12857 509 aa27.56■■■□□ 2
TMEM260-207ENST00000555497 DCAF8Q5TAQ9 597 aa27.56■■■□□ 2
TMEM260-207ENST00000555497 HHIPL2Q6UWX4 724 aa27.56■■■□□ 2
TMEM260-207ENST00000555497 C2CD5Q86YS7 1000 aa27.56■■■□□ 2
TMEM260-207ENST00000555497 VSTM4Q8IW00 320 aa27.56■■■□□ 2
TMEM260-207ENST00000555497 SMYD4Q8IYR2 804 aaPredicted RBP27.56■■■□□ 2
TMEM260-207ENST00000555497 GSDMAQ96QA5 445 aa27.56■■■□□ 2
TMEM260-207ENST00000555497 SMARCA1P28370 1054 aa27.56■■■□□ 2
TMEM260-207ENST00000555497 ERCC5P28715 1186 aaPredicted RBP27.56■■■□□ 2
TMEM260-207ENST00000555497 CUL4BQ13620 913 aa27.56■■■□□ 2
TMEM260-207ENST00000555497 SERPINB13Q9UIV8 391 aa27.56■■■□□ 2
TMEM260-207ENST00000555497 SMCO2A6NFE2 343 aa27.55■■■□□ 2
TMEM260-207ENST00000555497 DYNC1I1O14576 645 aa27.55■■■□□ 2
TMEM260-207ENST00000555497 TNNT1P13805 278 aa27.55■■■□□ 2
TMEM260-207ENST00000555497 SHMT1P34896 483 aa27.55■■■□□ 2
TMEM260-207ENST00000555497 ZFPM1Q8IX07 1006 aa27.55■■■□□ 2
TMEM260-207ENST00000555497 TEKT1Q969V4 418 aa27.55■■■□□ 2
TMEM260-207ENST00000555497 RIOX1Q9H6W3 641 aa27.55■■■□□ 2
TMEM260-207ENST00000555497 SLX4Q8IY92 1834 aa27.55■■■□□ 2
TMEM260-207ENST00000555497 SFPQP23246 707 aaKnown RBP eCLIP27.55■■■□□ 2
TMEM260-207ENST00000555497 TSC1Q92574 1164 aa27.55■■■□□ 2
TMEM260-207ENST00000555497 TMX4Q9H1E5 349 aaPredicted RBP27.55■■■□□ 2
TMEM260-207ENST00000555497 SCN9AQ15858 1988 aa27.54■■■□□ 2
TMEM260-207ENST00000555497 PP2D1A8MPX8 630 aa27.54■■■□□ 2
TMEM260-207ENST00000555497 PPP1R3GB7ZBB8 358 aa27.54■■■□□ 2
TMEM260-207ENST00000555497 FAM177A1Q8N128 213 aaPredicted RBP27.54■■■□□ 2
TMEM260-207ENST00000555497 TRMT1Q9NXH9 659 aaKnown RBP27.54■■■□□ 2
TMEM260-207ENST00000555497 RIOK3O14730 519 aaKnown RBP27.53■■■□□ 2
TMEM260-207ENST00000555497 CRKP46108 304 aa27.53■■■□□ 2
TMEM260-207ENST00000555497 KARSQ15046 597 aaKnown RBP27.53■■■□□ 2
TMEM260-207ENST00000555497 KLHL10Q6JEL2 608 aa27.53■■■□□ 2
TMEM260-207ENST00000555497 CCAR2Q8N163 923 aaKnown RBP27.53■■■□□ 2
TMEM260-207ENST00000555497 ZNF219Q9P2Y4 722 aaPredicted RBP27.53■■■□□ 2
TMEM260-207ENST00000555497 RBM10P98175 930 aaKnown RBP27.53■■■□□ 2
TMEM260-207ENST00000555497 DTHD1Q6ZMT9 781 aa27.53■■■□□ 2
TMEM260-207ENST00000555497 SEC63Q9UGP8 760 aaKnown RBP27.53■■■□□ 2
TMEM260-207ENST00000555497 GTF2F1P35269 517 aaKnown RBP eCLIP27.52■■■□□ 2
TMEM260-207ENST00000555497 STX17P56962 302 aa27.52■■■□□ 2
TMEM260-207ENST00000555497 GOLGA8FQ08AF8 430 aa27.52■■■□□ 2
TMEM260-207ENST00000555497 GOLGA8DPQ0D2H9 430 aa27.52■■■□□ 2
TMEM260-207ENST00000555497 PODNQ7Z5L7 613 aa27.52■■■□□ 2
TMEM260-207ENST00000555497 SNHG28P0DPA3 235 aa27.52■■■□□ 2
TMEM260-207ENST00000555497 E4F1Q66K89 784 aaPredicted RBP27.52■■■□□ 2
TMEM260-207ENST00000555497 AEBP2Q6ZN18 517 aaPredicted RBP27.52■■■□□ 2
TMEM260-207ENST00000555497 KCND1Q9NSA2 647 aa27.52■■■□□ 2
TMEM260-207ENST00000555497 CDK11BP21127 795 aaKnown RBP27.51■■□□□ 1.99
TMEM260-207ENST00000555497 KIAA0825Q8IV33 1275 aa27.51■■□□□ 1.99
TMEM260-207ENST00000555497 CCDC12Q8WUD4 166 aaPredicted RBP27.51■■□□□ 1.99
TMEM260-207ENST00000555497 C6orf50Q9HD87 102 aa27.51■■□□□ 1.99
TMEM260-207ENST00000555497 SWAP70Q9UH65 585 aa27.51■■□□□ 1.99
TMEM260-207ENST00000555497 GTPBP6O43824 516 aaPredicted RBP27.51■■□□□ 1.99
TMEM260-207ENST00000555497 CHRNA5P30532 468 aa27.51■■□□□ 1.99
TMEM260-207ENST00000555497 CACNB3P54284 484 aa27.51■■□□□ 1.99
TMEM260-207ENST00000555497 NAALADL2Q58DX5 795 aa27.51■■□□□ 1.99
TMEM260-207ENST00000555497 NYAP1Q6ZVC0 841 aa27.51■■□□□ 1.99
TMEM260-207ENST00000555497 KRT25Q7Z3Z0 450 aa27.51■■□□□ 1.99
TMEM260-207ENST00000555497 GPCPD1Q9NPB8 672 aa27.51■■□□□ 1.99
TMEM260-207ENST00000555497 CT47A1Q5JQC4 288 aaPredicted RBP27.5■■□□□ 1.99
TMEM260-207ENST00000555497 PYM1Q9BRP8 204 aaKnown RBP27.5■■□□□ 1.99
TMEM260-207ENST00000555497 TNS1Q9HBL0 1735 aaKnown RBP27.5■■□□□ 1.99
TMEM260-207ENST00000555497 TTLL1O95922 423 aa27.49■■□□□ 1.99
TMEM260-207ENST00000555497 NONOQ15233 471 aaKnown RBP eCLIP27.49■■□□□ 1.99
TMEM260-207ENST00000555497 SPATA1Q5VX52 437 aa27.49■■□□□ 1.99
TMEM260-207ENST00000555497 COA7Q96BR5 231 aa27.49■■□□□ 1.99
TMEM260-207ENST00000555497 ZDHHC15Q96MV8 337 aa27.49■■□□□ 1.99
TMEM260-207ENST00000555497 DISC1Q9NRI5 854 aa27.49■■□□□ 1.99
TMEM260-207ENST00000555497 TMEM260Q9NX78 707 aa27.49■■□□□ 1.99
TMEM260-207ENST00000555497 BIN2Q9UBW5 565 aaPredicted RBP27.49■■□□□ 1.99
TMEM260-207ENST00000555497 GREB1LQ9C091 1923 aaPredicted RBP27.49■■□□□ 1.99
TMEM260-207ENST00000555497 H0YIN7 160 aa27.49■■□□□ 1.99
TMEM260-207ENST00000555497 GNA11P29992 359 aa27.49■■□□□ 1.99
TMEM260-207ENST00000555497 LETM2Q2VYF4 491 aa27.49■■□□□ 1.99
TMEM260-207ENST00000555497 ASPRV1Q53RT3 343 aa27.49■■□□□ 1.99
TMEM260-207ENST00000555497 STYK1Q6J9G0 422 aa27.49■■□□□ 1.99
TMEM260-207ENST00000555497 APTXQ7Z2E3 356 aaKnown RBP27.49■■□□□ 1.99
TMEM260-207ENST00000555497 LRRC15Q8TF66 581 aa27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms