RNA–Protein interactions for RNA: ENST00000555382.5

PRKCH-215, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 691 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-215ENST00000555382 CNMDO75829 334 aa11.31□□□□□ -0.6
PRKCH-215ENST00000555382 HAND2P61296 217 aa11.31□□□□□ -0.6
PRKCH-215ENST00000555382 ERVK-9P63128 1117 aa11.31□□□□□ -0.6
PRKCH-215ENST00000555382 ERVK-24P63145 666 aa11.31□□□□□ -0.6
PRKCH-215ENST00000555382 SMAD3P84022 425 aaKnown RBP11.31□□□□□ -0.6
PRKCH-215ENST00000555382 CTDSPL2Q05D32 466 aa11.31□□□□□ -0.6
PRKCH-215ENST00000555382 SNX17Q15036 470 aa11.31□□□□□ -0.6
PRKCH-215ENST00000555382 SHHQ15465 462 aa11.31□□□□□ -0.6
PRKCH-215ENST00000555382 DGKHQ86XP1 1220 aa11.31□□□□□ -0.6
PRKCH-215ENST00000555382 USP38Q8NB14 1042 aa11.31□□□□□ -0.6
PRKCH-215ENST00000555382 GPRC5AQ8NFJ5 357 aa11.31□□□□□ -0.6
PRKCH-215ENST00000555382 MYLIPQ8WY64 445 aa11.31□□□□□ -0.6
PRKCH-215ENST00000555382 DYNLL2Q96FJ2 89 aa11.31□□□□□ -0.6
PRKCH-215ENST00000555382 NEK1Q96PY6 1258 aa11.31□□□□□ -0.6
PRKCH-215ENST00000555382 KANSL2Q9H9L4 492 aa11.31□□□□□ -0.6
PRKCH-215ENST00000555382 ZSWIM6Q9HCJ5 1215 aa11.31□□□□□ -0.6
PRKCH-215ENST00000555382 MYH4Q9Y623 1939 aa11.31□□□□□ -0.6
PRKCH-215ENST00000555382 A0A0G2JMZ2 1700 aa11.3□□□□□ -0.6
PRKCH-215ENST00000555382 SMIM22K7EJ46 135 aa11.3□□□□□ -0.6
PRKCH-215ENST00000555382 DNM1LO00429 736 aa11.3□□□□□ -0.6
PRKCH-215ENST00000555382 HOXC6P09630 235 aa11.3□□□□□ -0.6
PRKCH-215ENST00000555382 MCM5P33992 734 aa11.3□□□□□ -0.6
PRKCH-215ENST00000555382 RGS2P41220 211 aa11.3□□□□□ -0.6
PRKCH-215ENST00000555382 RTP1P59025 263 aa11.3□□□□□ -0.6
PRKCH-215ENST00000555382 EXOSC10Q01780 885 aaKnown RBP11.3□□□□□ -0.6
PRKCH-215ENST00000555382 EVX2Q03828 476 aa11.3□□□□□ -0.6
PRKCH-215ENST00000555382 ABCB5Q2M3G0 1257 aa11.3□□□□□ -0.6
PRKCH-215ENST00000555382 STOX1Q6ZVD7 989 aa11.3□□□□□ -0.6
PRKCH-215ENST00000555382 DHX32Q7L7V1 743 aaKnown RBP11.3□□□□□ -0.6
PRKCH-215ENST00000555382 RALYLQ86SE5 291 aaKnown RBP11.3□□□□□ -0.6
PRKCH-215ENST00000555382 IQCA1Q86XH1 822 aa11.3□□□□□ -0.6
PRKCH-215ENST00000555382 MB21D2Q8IYB1 491 aaPredicted RBP11.3□□□□□ -0.6
PRKCH-215ENST00000555382 TMTC2Q8N394 836 aa11.3□□□□□ -0.6
PRKCH-215ENST00000555382 TRPV1Q8NER1 839 aa11.3□□□□□ -0.6
PRKCH-215ENST00000555382 MKL1Q969V6 931 aa11.3□□□□□ -0.6
PRKCH-215ENST00000555382 TMEM87BQ96K49 555 aa11.3□□□□□ -0.6
PRKCH-215ENST00000555382 CABP5Q9NP86 173 aa11.3□□□□□ -0.6
PRKCH-215ENST00000555382 ZSWIM5Q9P217 1185 aa11.3□□□□□ -0.6
PRKCH-215ENST00000555382 TACC3Q9Y6A5 838 aa11.3□□□□□ -0.6
PRKCH-215ENST00000555382 TSPY3P0CV98 308 aa11.29□□□□□ -0.6
PRKCH-215ENST00000555382 TSPY8P0CW00 308 aa11.29□□□□□ -0.6
PRKCH-215ENST00000555382 LIFRP42702 1097 aa11.29□□□□□ -0.6
PRKCH-215ENST00000555382 IRX3P78415 501 aaPredicted RBP11.29□□□□□ -0.6
PRKCH-215ENST00000555382 TFAP4Q01664 338 aa11.29□□□□□ -0.6
PRKCH-215ENST00000555382 MAP2K5Q13163 448 aa11.29□□□□□ -0.6
PRKCH-215ENST00000555382 SLC44A5Q8NCS7 719 aa11.29□□□□□ -0.6
PRKCH-215ENST00000555382 LPAR1Q92633 364 aa11.29□□□□□ -0.6
PRKCH-215ENST00000555382 KIF2CQ99661 725 aa11.29□□□□□ -0.6
PRKCH-215ENST00000555382 LBHD1Q9BQE6 289 aaPredicted RBP11.29□□□□□ -0.6
PRKCH-215ENST00000555382 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.29□□□□□ -0.6
PRKCH-215ENST00000555382 AGXT2Q9BYV1 514 aa11.29□□□□□ -0.6
PRKCH-215ENST00000555382 SENP6Q9GZR1 1112 aaPredicted RBP11.29□□□□□ -0.6
PRKCH-215ENST00000555382 EMILIN3Q9NT22 766 aa11.29□□□□□ -0.6
PRKCH-215ENST00000555382 NYAP2Q9P242 653 aa11.29□□□□□ -0.6
PRKCH-215ENST00000555382 DDX20Q9UHI6 824 aaKnown RBP11.29□□□□□ -0.6
PRKCH-215ENST00000555382 TAF6LQ9Y6J9 622 aa11.29□□□□□ -0.6
PRKCH-215ENST00000555382 TRANK1O15050 2925 aa11.29□□□□□ -0.6
PRKCH-215ENST00000555382 NEDD4P46934 1319 aa11.29□□□□□ -0.6
PRKCH-215ENST00000555382 TMEM265A0A087WTH1 108 aa11.28□□□□□ -0.6
PRKCH-215ENST00000555382 TSPY2A6NKD2 308 aa11.28□□□□□ -0.6
PRKCH-215ENST00000555382 B4E1Z4 1266 aa11.28□□□□□ -0.6
PRKCH-215ENST00000555382 KDM4AO75164 1064 aa11.28□□□□□ -0.6
PRKCH-215ENST00000555382 CYBAP13498 195 aa11.28□□□□□ -0.6
PRKCH-215ENST00000555382 COL9A1P20849 921 aa11.28□□□□□ -0.6
PRKCH-215ENST00000555382 GUCY1A2P33402 732 aa11.28□□□□□ -0.6
PRKCH-215ENST00000555382 EVCP57679 992 aa11.28□□□□□ -0.6
PRKCH-215ENST00000555382 SART3Q15020 963 aaKnown RBP11.28□□□□□ -0.6
PRKCH-215ENST00000555382 ADCK5Q3MIX3 580 aa11.28□□□□□ -0.6
PRKCH-215ENST00000555382 BLOC1S2Q6QNY1 142 aa11.28□□□□□ -0.6
PRKCH-215ENST00000555382 RUFY3Q7L099 469 aa11.28□□□□□ -0.6
PRKCH-215ENST00000555382 PLEKHH3Q7Z736 793 aa11.28□□□□□ -0.6
PRKCH-215ENST00000555382 AS3MTQ9HBK9 375 aa11.28□□□□□ -0.6
PRKCH-215ENST00000555382 PDLIM7Q9NR12 457 aa11.28□□□□□ -0.6
PRKCH-215ENST00000555382 MTMR4Q9NYA4 1195 aa11.28□□□□□ -0.6
PRKCH-215ENST00000555382 RAPGEFL1Q9UHV5 662 aa11.28□□□□□ -0.6
PRKCH-215ENST00000555382 ZBTB21Q9ULJ3 1066 aa11.28□□□□□ -0.6
PRKCH-215ENST00000555382 CYP46A1Q9Y6A2 500 aa11.28□□□□□ -0.6
PRKCH-215ENST00000555382 C19orf81C9J6K1 198 aa11.27□□□□□ -0.61
PRKCH-215ENST00000555382 RANBP6O60518 1105 aaKnown RBP11.27□□□□□ -0.61
PRKCH-215ENST00000555382 PRDM1O75626 825 aa11.27□□□□□ -0.61
PRKCH-215ENST00000555382 TTLL1O95922 423 aa11.27□□□□□ -0.61
PRKCH-215ENST00000555382 GH2P01242 217 aa11.27□□□□□ -0.61
PRKCH-215ENST00000555382 AKR1B1P15121 316 aa11.27□□□□□ -0.61
PRKCH-215ENST00000555382 RPS6KB1P23443 525 aa11.27□□□□□ -0.61
PRKCH-215ENST00000555382 ITGB8P26012 769 aa11.27□□□□□ -0.61
PRKCH-215ENST00000555382 RCAN1P53805 252 aa11.27□□□□□ -0.61
PRKCH-215ENST00000555382 ATN1P54259 1190 aaPredicted RBP11.27□□□□□ -0.61
PRKCH-215ENST00000555382 GRB14Q14449 540 aa11.27□□□□□ -0.61
PRKCH-215ENST00000555382 RABEP1Q15276 862 aa11.27□□□□□ -0.61
PRKCH-215ENST00000555382 SEC23AQ15436 765 aa11.27□□□□□ -0.61
PRKCH-215ENST00000555382 LBX2Q6XYB7 198 aa11.27□□□□□ -0.61
PRKCH-215ENST00000555382 SGMS1Q86VZ5 419 aa11.27□□□□□ -0.61
PRKCH-215ENST00000555382 IGDCC4Q8TDY8 1250 aa11.27□□□□□ -0.61
PRKCH-215ENST00000555382 GTF3C2Q8WUA4 911 aaPredicted RBP11.27□□□□□ -0.61
PRKCH-215ENST00000555382 C12orf42Q96LP6 360 aa11.27□□□□□ -0.61
PRKCH-215ENST00000555382 JAKMIP1Q96N16 626 aaKnown RBP11.27□□□□□ -0.61
PRKCH-215ENST00000555382 MAP3K14Q99558 947 aa11.27□□□□□ -0.61
PRKCH-215ENST00000555382 SH2D4AQ9H788 454 aa11.27□□□□□ -0.61
PRKCH-215ENST00000555382 IL17RBQ9NRM6 502 aa11.27□□□□□ -0.61
PRKCH-215ENST00000555382 TRIM43BA6NCK2 446 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms