RNA–Protein interactions for RNA: ENST00000555114.5

NEDD1-207, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 731 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-207ENST00000555114 KIAA0355O15063 1070 aa18.5■□□□□ 0.55
NEDD1-207ENST00000555114 ZFYP08048 801 aaPredicted RBP18.5■□□□□ 0.55
NEDD1-207ENST00000555114 TAL1P17542 331 aaPredicted RBP18.5■□□□□ 0.55
NEDD1-207ENST00000555114 RASA1P20936 1047 aa18.5■□□□□ 0.55
NEDD1-207ENST00000555114 TDO2P48775 406 aa18.5■□□□□ 0.55
NEDD1-207ENST00000555114 ZNF444Q8N0Y2 327 aaPredicted RBP18.5■□□□□ 0.55
NEDD1-207ENST00000555114 KBTBD3Q8NAB2 608 aa18.5■□□□□ 0.55
NEDD1-207ENST00000555114 APPBP2Q92624 585 aa18.5■□□□□ 0.55
NEDD1-207ENST00000555114 CDX2Q99626 313 aaPredicted RBP18.5■□□□□ 0.55
NEDD1-207ENST00000555114 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.5■□□□□ 0.55
NEDD1-207ENST00000555114 SEMA6BQ9H3T3 888 aa18.5■□□□□ 0.55
NEDD1-207ENST00000555114 SPC25Q9HBM1 224 aa18.5■□□□□ 0.55
NEDD1-207ENST00000555114 TMEM39AQ9NV64 488 aa18.5■□□□□ 0.55
NEDD1-207ENST00000555114 RCAN3Q9UKA8 241 aa18.5■□□□□ 0.55
NEDD1-207ENST00000555114 ZHX1Q9UKY1 873 aaPredicted RBP18.5■□□□□ 0.55
NEDD1-207ENST00000555114 COL11A1P12107 1806 aaPredicted RBP18.5■□□□□ 0.55
NEDD1-207ENST00000555114 ZNFX1Q9P2E3 1918 aaKnown RBP18.5■□□□□ 0.55
NEDD1-207ENST00000555114 TMEM265A0A087WTH1 108 aa18.49■□□□□ 0.55
NEDD1-207ENST00000555114 ATP2A1O14983 1001 aa18.49■□□□□ 0.55
NEDD1-207ENST00000555114 NDUFB10O96000 172 aa18.49■□□□□ 0.55
NEDD1-207ENST00000555114 FPGSQ05932 587 aa18.49■□□□□ 0.55
NEDD1-207ENST00000555114 ZNF467Q7Z7K2 595 aaPredicted RBP18.49■□□□□ 0.55
NEDD1-207ENST00000555114 STK11IPQ8N1F8 1099 aa18.49■□□□□ 0.55
NEDD1-207ENST00000555114 TOX2Q96NM4 488 aa18.49■□□□□ 0.55
NEDD1-207ENST00000555114 NUP88Q99567 741 aaPredicted RBP18.49■□□□□ 0.55
NEDD1-207ENST00000555114 CLIP2Q9UDT6 1046 aa18.49■□□□□ 0.55
NEDD1-207ENST00000555114 FBXO40Q9UH90 709 aa18.49■□□□□ 0.55
NEDD1-207ENST00000555114 SYNPO2Q9UMS6 1093 aa18.49■□□□□ 0.55
NEDD1-207ENST00000555114 MROH7Q68CQ1 1323 aa18.49■□□□□ 0.55
NEDD1-207ENST00000555114 DNAH12Q6ZR08 3092 aa18.48■□□□□ 0.55
NEDD1-207ENST00000555114 CUL9Q8IWT3 2517 aa18.48■□□□□ 0.55
NEDD1-207ENST00000555114 GSG1L2A8MUP6 293 aa18.48■□□□□ 0.55
NEDD1-207ENST00000555114 SMARCA5O60264 1052 aaPredicted RBP18.48■□□□□ 0.55
NEDD1-207ENST00000555114 ADAMTS4O75173 837 aa18.48■□□□□ 0.55
NEDD1-207ENST00000555114 APPP05067 770 aa18.48■□□□□ 0.55
NEDD1-207ENST00000555114 SLC4A3P48751 1232 aa18.48■□□□□ 0.55
NEDD1-207ENST00000555114 ACLYP53396 1101 aa18.48■□□□□ 0.55
NEDD1-207ENST00000555114 MAMDC4Q6UXC1 1216 aa18.48■□□□□ 0.55
NEDD1-207ENST00000555114 ANKRD33Q7Z3H0 272 aa18.48■□□□□ 0.55
NEDD1-207ENST00000555114 CPXCR1Q8N123 301 aa18.48■□□□□ 0.55
NEDD1-207ENST00000555114 MAFAQ8NHW3 353 aaPredicted RBP18.48■□□□□ 0.55
NEDD1-207ENST00000555114 GLT1D1Q96MS3 346 aa18.48■□□□□ 0.55
NEDD1-207ENST00000555114 COL25A1Q9BXS0 654 aaPredicted RBP18.48■□□□□ 0.55
NEDD1-207ENST00000555114 FEM1BQ9UK73 627 aa18.48■□□□□ 0.55
NEDD1-207ENST00000555114 PLXNA1Q9UIW2 1896 aa18.48■□□□□ 0.55
NEDD1-207ENST00000555114 SYNRGQ9UMZ2 1314 aa18.48■□□□□ 0.55
NEDD1-207ENST00000555114 RNF113AO15541 343 aaKnown RBP18.47■□□□□ 0.55
NEDD1-207ENST00000555114 GPAA1O43292 621 aa18.47■□□□□ 0.55
NEDD1-207ENST00000555114 DUSP11O75319 330 aaKnown RBP18.47■□□□□ 0.55
NEDD1-207ENST00000555114 CCDC174Q6PII3 467 aa18.47■□□□□ 0.55
NEDD1-207ENST00000555114 ANKRD35Q8N283 1001 aa18.47■□□□□ 0.55
NEDD1-207ENST00000555114 PCSK9Q8NBP7 692 aaKnown RBP18.47■□□□□ 0.55
NEDD1-207ENST00000555114 CHST13Q8NET6 341 aa18.47■□□□□ 0.55
NEDD1-207ENST00000555114 KIFC2Q96AC6 838 aa18.47■□□□□ 0.55
NEDD1-207ENST00000555114 NACAP1Q9BZK3 213 aa18.47■□□□□ 0.55
NEDD1-207ENST00000555114 SMCHD1A6NHR9 2005 aa18.47■□□□□ 0.55
NEDD1-207ENST00000555114 DNAJC25-GNG10A0A024R161 153 aa18.46■□□□□ 0.55
NEDD1-207ENST00000555114 TTLL1O95922 423 aa18.46■□□□□ 0.55
NEDD1-207ENST00000555114 SLC3A2P08195 630 aaKnown RBP18.46■□□□□ 0.55
NEDD1-207ENST00000555114 FDX1P10109 184 aa18.46■□□□□ 0.55
NEDD1-207ENST00000555114 FOSL2P15408 326 aa18.46■□□□□ 0.55
NEDD1-207ENST00000555114 OAZ1P54368 228 aa18.46■□□□□ 0.55
NEDD1-207ENST00000555114 OSBP2Q969R2 916 aa18.46■□□□□ 0.55
NEDD1-207ENST00000555114 LENG1Q96BZ8 264 aaPredicted RBP18.46■□□□□ 0.55
NEDD1-207ENST00000555114 ABHD16BQ9H3Z7 469 aa18.46■□□□□ 0.55
NEDD1-207ENST00000555114 GREB1LQ9C091 1923 aaPredicted RBP18.45■□□□□ 0.54
NEDD1-207ENST00000555114 A0A0C4DFX4 3053 aa18.45■□□□□ 0.54
NEDD1-207ENST00000555114 SNAI1O95863 264 aaPredicted RBP18.45■□□□□ 0.54
NEDD1-207ENST00000555114 ITGB8P26012 769 aa18.45■□□□□ 0.54
NEDD1-207ENST00000555114 CST5P28325 142 aaPredicted RBP18.45■□□□□ 0.54
NEDD1-207ENST00000555114 PDE4BQ07343 736 aa18.45■□□□□ 0.54
NEDD1-207ENST00000555114 ACVR2BQ13705 512 aa18.45■□□□□ 0.54
NEDD1-207ENST00000555114 KCNA10Q16322 511 aa18.45■□□□□ 0.54
NEDD1-207ENST00000555114 PPP4R3BQ5MIZ7 849 aa18.45■□□□□ 0.54
NEDD1-207ENST00000555114 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.45■□□□□ 0.54
NEDD1-207ENST00000555114 GMCL1P1Q8NEA9 526 aa18.45■□□□□ 0.54
NEDD1-207ENST00000555114 KLHDC9Q8NEP7 349 aa18.45■□□□□ 0.54
NEDD1-207ENST00000555114 MKL1Q969V6 931 aa18.45■□□□□ 0.54
NEDD1-207ENST00000555114 VTI1AQ96AJ9 217 aa18.45■□□□□ 0.54
NEDD1-207ENST00000555114 SLC38A10Q9HBR0 1119 aa18.45■□□□□ 0.54
NEDD1-207ENST00000555114 RAVER2Q9HCJ3 691 aaKnown RBP18.45■□□□□ 0.54
NEDD1-207ENST00000555114 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.45■□□□□ 0.54
NEDD1-207ENST00000555114 ISY1Q9ULR0 285 aaKnown RBP18.45■□□□□ 0.54
NEDD1-207ENST00000555114 RIPK3Q9Y572 518 aa18.45■□□□□ 0.54
NEDD1-207ENST00000555114 ELP1O95163 1332 aa18.45■□□□□ 0.54
NEDD1-207ENST00000555114 IGKV6D-41A0A0C4DH26 115 aa18.44■□□□□ 0.54
NEDD1-207ENST00000555114 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.44■□□□□ 0.54
NEDD1-207ENST00000555114 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.44■□□□□ 0.54
NEDD1-207ENST00000555114 PATL2C9JE40 543 aaKnown RBP18.44■□□□□ 0.54
NEDD1-207ENST00000555114 C6orf222P0C671 652 aaPredicted RBP18.44■□□□□ 0.54
NEDD1-207ENST00000555114 TSPY3P0CV98 308 aa18.44■□□□□ 0.54
NEDD1-207ENST00000555114 TSPY8P0CW00 308 aa18.44■□□□□ 0.54
NEDD1-207ENST00000555114 FAAP100Q0VG06 881 aa18.44■□□□□ 0.54
NEDD1-207ENST00000555114 MYLIPQ8WY64 445 aa18.44■□□□□ 0.54
NEDD1-207ENST00000555114 CEP95Q96GE4 821 aa18.44■□□□□ 0.54
NEDD1-207ENST00000555114 TTYH1Q9H313 450 aaPredicted RBP18.44■□□□□ 0.54
NEDD1-207ENST00000555114 MTMR4Q9NYA4 1195 aa18.44■□□□□ 0.54
NEDD1-207ENST00000555114 PRDM1O75626 825 aa18.43■□□□□ 0.54
NEDD1-207ENST00000555114 TIMP1P01033 207 aa18.43■□□□□ 0.54
NEDD1-207ENST00000555114 BMP3P12645 472 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms