RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 UHMK1Q8TAS1 419 aaKnown RBP7.54□□□□□ -1.2
SYNE2-216ENST00000555002 ZMAT2Q96NC0 199 aaKnown RBP7.54□□□□□ -1.2
SYNE2-216ENST00000555002 WDR64B1ANS9 1081 aa7.54□□□□□ -1.2
SYNE2-216ENST00000555002 PAK2Q13177 524 aa7.54□□□□□ -1.2
SYNE2-216ENST00000555002 OTUD6AQ7L8S5 288 aa7.54□□□□□ -1.2
SYNE2-216ENST00000555002 FAM207AQ9NSI2 230 aaPredicted RBP7.54□□□□□ -1.2
SYNE2-216ENST00000555002 KCNH3Q9ULD8 1083 aa7.54□□□□□ -1.2
SYNE2-216ENST00000555002 PCDHB4Q9Y5E5 795 aa7.54□□□□□ -1.2
SYNE2-216ENST00000555002 TROQ12816 1431 aaPredicted RBP7.54□□□□□ -1.2
SYNE2-216ENST00000555002 LRRIQ4A6NIV6 560 aa7.54□□□□□ -1.2
SYNE2-216ENST00000555002 KRT10P13645 584 aa7.54□□□□□ -1.2
SYNE2-216ENST00000555002 ATF2P15336 505 aa7.54□□□□□ -1.2
SYNE2-216ENST00000555002 KLHL30Q0D2K2 578 aa7.54□□□□□ -1.2
SYNE2-216ENST00000555002 MTMR3Q13615 1198 aa7.54□□□□□ -1.2
SYNE2-216ENST00000555002 FLOT2Q14254 428 aa7.54□□□□□ -1.2
SYNE2-216ENST00000555002 TBC1D10BQ4KMP7 808 aaPredicted RBP7.54□□□□□ -1.2
SYNE2-216ENST00000555002 DPP9Q86TI2 863 aa7.54□□□□□ -1.2
SYNE2-216ENST00000555002 PPP1R9AQ9ULJ8 1098 aa7.54□□□□□ -1.2
SYNE2-216ENST00000555002 METTL23Q86XA0 190 aa7.54□□□□□ -1.2
SYNE2-216ENST00000555002 TMCO5AQ8N6Q1 288 aa7.54□□□□□ -1.2
SYNE2-216ENST00000555002 MYL10Q9BUA6 226 aa7.54□□□□□ -1.2
SYNE2-216ENST00000555002 HESX1Q9UBX0 185 aa7.54□□□□□ -1.2
SYNE2-216ENST00000555002 TMEM259Q4ZIN3 620 aa7.53□□□□□ -1.2
SYNE2-216ENST00000555002 RUFY4Q6ZNE9 571 aa7.53□□□□□ -1.2
SYNE2-216ENST00000555002 CADPS2Q86UW7 1296 aa7.53□□□□□ -1.2
SYNE2-216ENST00000555002 SLF1Q9BQI6 1058 aa7.53□□□□□ -1.2
SYNE2-216ENST00000555002 NCOA5Q9HCD5 579 aaKnown RBP7.53□□□□□ -1.2
SYNE2-216ENST00000555002 BCS1LQ9Y276 419 aa7.53□□□□□ -1.2
SYNE2-216ENST00000555002 CPA1P15085 419 aa7.53□□□□□ -1.2
SYNE2-216ENST00000555002 NLRP7Q8WX94 980 aa7.53□□□□□ -1.2
SYNE2-216ENST00000555002 CCDC124Q96CT7 223 aaKnown RBP7.53□□□□□ -1.2
SYNE2-216ENST00000555002 ZC4H2Q9NQZ6 224 aa7.53□□□□□ -1.2
SYNE2-216ENST00000555002 ZNF654Q8IZM8 581 aa7.53□□□□□ -1.2
SYNE2-216ENST00000555002 STAG1Q8WVM7 1258 aa7.53□□□□□ -1.2
SYNE2-216ENST00000555002 BAIAP2L1Q9UHR4 511 aa7.53□□□□□ -1.2
SYNE2-216ENST00000555002 FBXO31Q5XUX0 539 aaPredicted RBP7.53□□□□□ -1.2
SYNE2-216ENST00000555002 PIP4K2CQ8TBX8 421 aa7.53□□□□□ -1.2
SYNE2-216ENST00000555002 ABTB1Q969K4 478 aaPredicted RBP7.53□□□□□ -1.2
SYNE2-216ENST00000555002 EEF1DP29692 281 aaKnown RBP7.53□□□□□ -1.2
SYNE2-216ENST00000555002 IRX4P78413 519 aa7.53□□□□□ -1.2
SYNE2-216ENST00000555002 DLGAP5Q15398 846 aa7.53□□□□□ -1.2
SYNE2-216ENST00000555002 ANO4Q32M45 955 aa7.53□□□□□ -1.2
SYNE2-216ENST00000555002 TRAIPQ9BWF2 469 aa7.53□□□□□ -1.2
SYNE2-216ENST00000555002 TSR3Q9UJK0 312 aaKnown RBP7.53□□□□□ -1.2
SYNE2-216ENST00000555002 KRIT1O00522 736 aa7.53□□□□□ -1.2
SYNE2-216ENST00000555002 POLGP54098 1239 aaPredicted RBP7.53□□□□□ -1.2
SYNE2-216ENST00000555002 CEP19Q96LK0 163 aa7.53□□□□□ -1.2
SYNE2-216ENST00000555002 CPSF3Q9UKF6 684 aaKnown RBP7.53□□□□□ -1.2
SYNE2-216ENST00000555002 RNF40O75150 1001 aa7.53□□□□□ -1.2
SYNE2-216ENST00000555002 TUBB4BP68371 445 aa7.53□□□□□ -1.2
SYNE2-216ENST00000555002 SPOPLQ6IQ16 392 aa7.53□□□□□ -1.2
SYNE2-216ENST00000555002 MEIS3Q99687 375 aa7.53□□□□□ -1.2
SYNE2-216ENST00000555002 AMFRQ9UKV5 643 aa7.53□□□□□ -1.2
SYNE2-216ENST00000555002 MAST3O60307 1309 aa7.53□□□□□ -1.2
SYNE2-216ENST00000555002 ANXA13P27216 316 aa7.53□□□□□ -1.2
SYNE2-216ENST00000555002 STX1BP61266 288 aa7.53□□□□□ -1.2
SYNE2-216ENST00000555002 MYL5Q02045 173 aa7.53□□□□□ -1.2
SYNE2-216ENST00000555002 NSUN2Q08J23 767 aaKnown RBP eCLIP7.53□□□□□ -1.2
SYNE2-216ENST00000555002 SMC5Q8IY18 1101 aa7.53□□□□□ -1.2
SYNE2-216ENST00000555002 CCDC138Q96M89 665 aa7.53□□□□□ -1.2
SYNE2-216ENST00000555002 SLC7A5P2Q9GIP4 190 aa7.53□□□□□ -1.2
SYNE2-216ENST00000555002 TCP10L2B9ZVM9 353 aa7.53□□□□□ -1.2
SYNE2-216ENST00000555002 CWF19L2Q2TBE0 894 aaKnown RBP7.53□□□□□ -1.2
SYNE2-216ENST00000555002 KSR2Q6VAB6 950 aa7.53□□□□□ -1.2
SYNE2-216ENST00000555002 C2CD5Q86YS7 1000 aa7.53□□□□□ -1.2
SYNE2-216ENST00000555002 NCLNQ969V3 563 aa7.53□□□□□ -1.2
SYNE2-216ENST00000555002 LRRC59Q96AG4 307 aaKnown RBP7.53□□□□□ -1.2
SYNE2-216ENST00000555002 DCPSQ96C86 337 aaKnown RBP7.53□□□□□ -1.2
SYNE2-216ENST00000555002 AP5M1Q9H0R1 490 aa7.53□□□□□ -1.2
SYNE2-216ENST00000555002 CCDC87Q9NVE4 849 aa7.53□□□□□ -1.2
SYNE2-216ENST00000555002 INTUQ9ULD6 942 aa7.53□□□□□ -1.2
SYNE2-216ENST00000555002 PLCH2O75038 1416 aa7.53□□□□□ -1.2
SYNE2-216ENST00000555002 M0R2C6 588 aa7.52□□□□□ -1.2
SYNE2-216ENST00000555002 HADHAP40939 763 aa7.52□□□□□ -1.2
SYNE2-216ENST00000555002 XKR9Q5GH70 373 aa7.52□□□□□ -1.2
SYNE2-216ENST00000555002 KRT27Q7Z3Y8 459 aa7.52□□□□□ -1.2
SYNE2-216ENST00000555002 PRPF38AQ8NAV1 312 aaKnown RBP7.52□□□□□ -1.2
SYNE2-216ENST00000555002 PCDHB13Q9Y5F0 798 aa7.52□□□□□ -1.2
SYNE2-216ENST00000555002 ATP8B3O60423 1300 aa7.52□□□□□ -1.2
SYNE2-216ENST00000555002 HIBADHP31937 336 aaKnown RBP7.52□□□□□ -1.2
SYNE2-216ENST00000555002 HS1BP3Q53T59 392 aa7.52□□□□□ -1.2
SYNE2-216ENST00000555002 ANO1Q5XXA6 986 aa7.52□□□□□ -1.2
SYNE2-216ENST00000555002 NFATC2IPQ8NCF5 419 aa7.52□□□□□ -1.2
SYNE2-216ENST00000555002 OTULINQ96BN8 352 aa7.52□□□□□ -1.2
SYNE2-216ENST00000555002 ZBED2Q9BTP6 218 aa7.52□□□□□ -1.2
SYNE2-216ENST00000555002 ZNF18P17022 549 aa7.52□□□□□ -1.21
SYNE2-216ENST00000555002 SOX5P35711 763 aa7.52□□□□□ -1.21
SYNE2-216ENST00000555002 BMP2KLQ5H9B9 411 aa7.52□□□□□ -1.21
SYNE2-216ENST00000555002 DHX32Q7L7V1 743 aaKnown RBP7.52□□□□□ -1.21
SYNE2-216ENST00000555002 SNX19Q92543 992 aa7.52□□□□□ -1.21
SYNE2-216ENST00000555002 SRPK1Q96SB4 655 aaKnown RBP7.52□□□□□ -1.21
SYNE2-216ENST00000555002 GLT8D2Q9H1C3 349 aa7.52□□□□□ -1.21
SYNE2-216ENST00000555002 CFAP221Q4G0U5 840 aa7.52□□□□□ -1.21
SYNE2-216ENST00000555002 TAGAPQ8N103 731 aa7.52□□□□□ -1.21
SYNE2-216ENST00000555002 USP40Q9NVE5 1235 aa7.52□□□□□ -1.21
SYNE2-216ENST00000555002 UBN2Q6ZU65 1347 aa7.52□□□□□ -1.21
SYNE2-216ENST00000555002 GPC4O75487 556 aa7.52□□□□□ -1.21
SYNE2-216ENST00000555002 PDE6CP51160 858 aa7.52□□□□□ -1.21
SYNE2-216ENST00000555002 ELF2Q15723 593 aa7.52□□□□□ -1.21
SYNE2-216ENST00000555002 REXO1Q8N1G1 1221 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms