RNA–Protein interactions for RNA: ENST00000554974.5

XRCC3-210, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4 BASIC

Gene XRCC3, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-210ENST00000554974 MCM3APO60318 1980 aa18.02■□□□□ 0.48
XRCC3-210ENST00000554974 SYNRGQ9UMZ2 1314 aa18.02■□□□□ 0.48
XRCC3-210ENST00000554974 GSG1L2A8MUP6 293 aa18.02■□□□□ 0.48
XRCC3-210ENST00000554974 MINDY4BA8MYZ0 360 aa18.02■□□□□ 0.48
XRCC3-210ENST00000554974 CLTBP09497 229 aa18.02■□□□□ 0.48
XRCC3-210ENST00000554974 AKR1A1P14550 325 aa18.02■□□□□ 0.48
XRCC3-210ENST00000554974 SLC4A3P48751 1232 aa18.02■□□□□ 0.48
XRCC3-210ENST00000554974 EPHB4P54760 987 aa18.02■□□□□ 0.48
XRCC3-210ENST00000554974 EPB41L4AQ9HCS5 686 aaPredicted RBP18.02■□□□□ 0.48
XRCC3-210ENST00000554974 ECHDC1Q9NTX5 307 aa18.02■□□□□ 0.48
XRCC3-210ENST00000554974 CNPY2Q9Y2B0 182 aa18.02■□□□□ 0.48
XRCC3-210ENST00000554974 F5H6K3 240 aa18.01■□□□□ 0.47
XRCC3-210ENST00000554974 ADAMTS4O75173 837 aa18.01■□□□□ 0.47
XRCC3-210ENST00000554974 COPB2P35606 906 aa18.01■□□□□ 0.47
XRCC3-210ENST00000554974 KLRC3Q07444 240 aa18.01■□□□□ 0.47
XRCC3-210ENST00000554974 SBK1Q52WX2 424 aa18.01■□□□□ 0.47
XRCC3-210ENST00000554974 OSBP2Q969R2 916 aa18.01■□□□□ 0.47
XRCC3-210ENST00000554974 TTYH1Q9H313 450 aaPredicted RBP18.01■□□□□ 0.47
XRCC3-210ENST00000554974 MKNK2Q9HBH9 465 aa18.01■□□□□ 0.47
XRCC3-210ENST00000554974 ZHX1Q9UKY1 873 aaPredicted RBP18.01■□□□□ 0.47
XRCC3-210ENST00000554974 TACC3Q9Y6A5 838 aa18.01■□□□□ 0.47
XRCC3-210ENST00000554974 PRDM1O75626 825 aa18■□□□□ 0.47
XRCC3-210ENST00000554974 CPXCR1Q8N123 301 aa18■□□□□ 0.47
XRCC3-210ENST00000554974 KBTBD3Q8NAB2 608 aa18■□□□□ 0.47
XRCC3-210ENST00000554974 RNPC3Q96LT9 517 aaKnown RBP18■□□□□ 0.47
XRCC3-210ENST00000554974 SEMA6BQ9H3T3 888 aa18■□□□□ 0.47
XRCC3-210ENST00000554974 NYAP2Q9P242 653 aa18■□□□□ 0.47
XRCC3-210ENST00000554974 MYADML2A6NDP7 307 aa17.99■□□□□ 0.47
XRCC3-210ENST00000554974 KIAA0355O15063 1070 aa17.99■□□□□ 0.47
XRCC3-210ENST00000554974 SNAI1O95863 264 aaPredicted RBP17.99■□□□□ 0.47
XRCC3-210ENST00000554974 RAG1P15918 1043 aa17.99■□□□□ 0.47
XRCC3-210ENST00000554974 ACLYP53396 1101 aa17.99■□□□□ 0.47
XRCC3-210ENST00000554974 IRX5P78411 483 aaPredicted RBP17.99■□□□□ 0.47
XRCC3-210ENST00000554974 SMAD3P84022 425 aaKnown RBP17.99■□□□□ 0.47
XRCC3-210ENST00000554974 LRRC47Q8N1G4 583 aaKnown RBP17.99■□□□□ 0.47
XRCC3-210ENST00000554974 MYLIPQ8WY64 445 aa17.99■□□□□ 0.47
XRCC3-210ENST00000554974 APPBP2Q92624 585 aa17.99■□□□□ 0.47
XRCC3-210ENST00000554974 DDX11Q96FC9 970 aa17.99■□□□□ 0.47
XRCC3-210ENST00000554974 CLIP2Q9UDT6 1046 aa17.99■□□□□ 0.47
XRCC3-210ENST00000554974 SYNGAP1Q96PV0 1343 aa17.98■□□□□ 0.47
XRCC3-210ENST00000554974 DNAJC25-GNG10A0A024R161 153 aa17.98■□□□□ 0.47
XRCC3-210ENST00000554974 IGKV6D-41A0A0C4DH26 115 aa17.98■□□□□ 0.47
XRCC3-210ENST00000554974 M0R2C6 588 aa17.98■□□□□ 0.47
XRCC3-210ENST00000554974 GPAA1O43292 621 aa17.98■□□□□ 0.47
XRCC3-210ENST00000554974 ADCY6O43306 1168 aa17.98■□□□□ 0.47
XRCC3-210ENST00000554974 TDO2P48775 406 aa17.98■□□□□ 0.47
XRCC3-210ENST00000554974 GIMAP6Q6P9H5 292 aa17.98■□□□□ 0.47
XRCC3-210ENST00000554974 PRPF38AQ8NAV1 312 aaKnown RBP17.98■□□□□ 0.47
XRCC3-210ENST00000554974 MAFAQ8NHW3 353 aaPredicted RBP17.98■□□□□ 0.47
XRCC3-210ENST00000554974 KIFC2Q96AC6 838 aa17.98■□□□□ 0.47
XRCC3-210ENST00000554974 CEP95Q96GE4 821 aa17.98■□□□□ 0.47
XRCC3-210ENST00000554974 RAVER2Q9HCJ3 691 aaKnown RBP17.98■□□□□ 0.47
XRCC3-210ENST00000554974 STARD7Q9NQZ5 370 aa17.98■□□□□ 0.47
XRCC3-210ENST00000554974 TMEM39AQ9NV64 488 aa17.98■□□□□ 0.47
XRCC3-210ENST00000554974 SPTBN5Q9NRC6 3674 aaKnown RBP17.97■□□□□ 0.47
XRCC3-210ENST00000554974 RNF113AO15541 343 aaKnown RBP17.97■□□□□ 0.47
XRCC3-210ENST00000554974 FPGSQ05932 587 aa17.97■□□□□ 0.47
XRCC3-210ENST00000554974 FAAP100Q0VG06 881 aa17.97■□□□□ 0.47
XRCC3-210ENST00000554974 MAMDC4Q6UXC1 1216 aa17.97■□□□□ 0.47
XRCC3-210ENST00000554974 MSL3Q8N5Y2 521 aaKnown RBP17.97■□□□□ 0.47
XRCC3-210ENST00000554974 FGD4Q96M96 766 aa17.97■□□□□ 0.47
XRCC3-210ENST00000554974 FAM184BQ9ULE4 1060 aa17.97■□□□□ 0.47
XRCC3-210ENST00000554974 LRRC37A2A6NM11 1700 aa17.96■□□□□ 0.47
XRCC3-210ENST00000554974 ATP2A1O14983 1001 aa17.96■□□□□ 0.47
XRCC3-210ENST00000554974 ZBED4O75132 1171 aa17.96■□□□□ 0.47
XRCC3-210ENST00000554974 APPP05067 770 aa17.96■□□□□ 0.47
XRCC3-210ENST00000554974 KCNA10Q16322 511 aa17.96■□□□□ 0.47
XRCC3-210ENST00000554974 CCSAPQ6IQ19 270 aaPredicted RBP17.96■□□□□ 0.47
XRCC3-210ENST00000554974 ANKRD33Q7Z3H0 272 aa17.96■□□□□ 0.47
XRCC3-210ENST00000554974 KLHDC9Q8NEP7 349 aa17.96■□□□□ 0.47
XRCC3-210ENST00000554974 GPATCH3Q96I76 525 aa17.96■□□□□ 0.47
XRCC3-210ENST00000554974 TSEN34Q9BSV6 310 aaKnown RBP17.96■□□□□ 0.47
XRCC3-210ENST00000554974 SLC38A10Q9HBR0 1119 aa17.96■□□□□ 0.47
XRCC3-210ENST00000554974 HOMER2Q9NSB8 354 aa17.96■□□□□ 0.47
XRCC3-210ENST00000554974 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.96■□□□□ 0.47
XRCC3-210ENST00000554974 CTDP1Q9Y5B0 961 aaPredicted RBP17.96■□□□□ 0.47
XRCC3-210ENST00000554974 SUPT16HQ9Y5B9 1047 aaKnown RBP17.96■□□□□ 0.47
XRCC3-210ENST00000554974 C6orf222P0C671 652 aaPredicted RBP17.95■□□□□ 0.46
XRCC3-210ENST00000554974 FOSL2P15408 326 aa17.95■□□□□ 0.46
XRCC3-210ENST00000554974 ANKRD35Q8N283 1001 aa17.95■□□□□ 0.46
XRCC3-210ENST00000554974 NUP133Q8WUM0 1156 aa17.95■□□□□ 0.46
XRCC3-210ENST00000554974 CHMP4CQ96CF2 233 aa17.95■□□□□ 0.46
XRCC3-210ENST00000554974 MTMR4Q9NYA4 1195 aa17.95■□□□□ 0.46
XRCC3-210ENST00000554974 CHD9Q3L8U1 2897 aa17.94■□□□□ 0.46
XRCC3-210ENST00000554974 PLIN4Q96Q06 1357 aa17.94■□□□□ 0.46
XRCC3-210ENST00000554974 MOXD2PA6NHM9 499 aa17.94■□□□□ 0.46
XRCC3-210ENST00000554974 DCDC2CA8MYV0 355 aa17.94■□□□□ 0.46
XRCC3-210ENST00000554974 DUSP11O75319 330 aaKnown RBP17.94■□□□□ 0.46
XRCC3-210ENST00000554974 ACVR2BQ13705 512 aa17.94■□□□□ 0.46
XRCC3-210ENST00000554974 ZNF467Q7Z7K2 595 aaPredicted RBP17.94■□□□□ 0.46
XRCC3-210ENST00000554974 ZNF444Q8N0Y2 327 aaPredicted RBP17.94■□□□□ 0.46
XRCC3-210ENST00000554974 TOX2Q96NM4 488 aa17.94■□□□□ 0.46
XRCC3-210ENST00000554974 SEC62Q99442 399 aaKnown RBP17.94■□□□□ 0.46
XRCC3-210ENST00000554974 TBX21Q9UL17 535 aa17.94■□□□□ 0.46
XRCC3-210ENST00000554974 ISY1Q9ULR0 285 aaKnown RBP17.94■□□□□ 0.46
XRCC3-210ENST00000554974 TTLL1O95922 423 aa17.93■□□□□ 0.46
XRCC3-210ENST00000554974 ZFYP08048 801 aaPredicted RBP17.93■□□□□ 0.46
XRCC3-210ENST00000554974 GNAT2P19087 354 aa17.93■□□□□ 0.46
XRCC3-210ENST00000554974 CCDC144BQ3MJ40 725 aa17.93■□□□□ 0.46
XRCC3-210ENST00000554974 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.93■□□□□ 0.465e-6■■■■■ 45.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms