RNA–Protein interactions for RNA: ENST00000554808.1

LINC01397-201, Transcript of long intergenic non-protein coding RNA 1397, humanhuman

TSL 4 BASIC

Gene LINC01397, Length 579 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01397-201ENST00000554808 KLF18A0A0U1RQI7 1052 aa9.38□□□□□ -0.91
LINC01397-201ENST00000554808 FLOT1O75955 427 aa9.38□□□□□ -0.91
LINC01397-201ENST00000554808 COPB2P35606 906 aa9.38□□□□□ -0.91
LINC01397-201ENST00000554808 RGS19P49795 217 aa9.38□□□□□ -0.91
LINC01397-201ENST00000554808 METAP2P50579 478 aaKnown RBP eCLIP9.38□□□□□ -0.91
LINC01397-201ENST00000554808 OAZ1P54368 228 aa9.38□□□□□ -0.91
LINC01397-201ENST00000554808 MLLT1Q03111 559 aaPredicted RBP9.38□□□□□ -0.91
LINC01397-201ENST00000554808 IKQ13123 557 aaPredicted RBP9.38□□□□□ -0.91
LINC01397-201ENST00000554808 TOB2Q14106 344 aaPredicted RBP9.38□□□□□ -0.91
LINC01397-201ENST00000554808 FAM83BQ5T0W9 1011 aa9.38□□□□□ -0.91
LINC01397-201ENST00000554808 CPLX2Q6PUV4 134 aaKnown RBP9.38□□□□□ -0.91
LINC01397-201ENST00000554808 MICU3Q86XE3 530 aa9.38□□□□□ -0.91
LINC01397-201ENST00000554808 SPICE1Q8N0Z3 855 aa9.38□□□□□ -0.91
LINC01397-201ENST00000554808 FAM43AQ8N2R8 423 aa9.38□□□□□ -0.91
LINC01397-201ENST00000554808 SLF1Q9BQI6 1058 aa9.38□□□□□ -0.91
LINC01397-201ENST00000554808 LRRC2Q9BYS8 371 aa9.38□□□□□ -0.91
LINC01397-201ENST00000554808 MCOLN1Q9GZU1 580 aa9.38□□□□□ -0.91
LINC01397-201ENST00000554808 ASCC2Q9H1I8 757 aaPredicted RBP9.38□□□□□ -0.91
LINC01397-201ENST00000554808 PPP1R9AQ9ULJ8 1098 aa9.38□□□□□ -0.91
LINC01397-201ENST00000554808 ISY1Q9ULR0 285 aaKnown RBP9.38□□□□□ -0.91
LINC01397-201ENST00000554808 CTDP1Q9Y5B0 961 aaPredicted RBP9.38□□□□□ -0.91
LINC01397-201ENST00000554808 HTTP42858 3142 aa9.38□□□□□ -0.91
LINC01397-201ENST00000554808 MYH7BA7E2Y1 1941 aa9.38□□□□□ -0.91
LINC01397-201ENST00000554808 LCTP09848 1927 aa9.38□□□□□ -0.91
LINC01397-201ENST00000554808 BRCA2P51587 3418 aa9.37□□□□□ -0.91
LINC01397-201ENST00000554808 PALM3A6NDB9 673 aaPredicted RBP9.37□□□□□ -0.91
LINC01397-201ENST00000554808 GOLGA8AA7E2F4 631 aa9.37□□□□□ -0.91
LINC01397-201ENST00000554808 GOLGA8BA8MQT2 603 aa9.37□□□□□ -0.91
LINC01397-201ENST00000554808 TMEM232C9JQI7 657 aa9.37□□□□□ -0.91
LINC01397-201ENST00000554808 IGF2BP3O00425 579 aaKnown RBP eCLIP9.37□□□□□ -0.91
LINC01397-201ENST00000554808 TLR2O60603 784 aa9.37□□□□□ -0.91
LINC01397-201ENST00000554808 CDKL5O76039 1030 aa9.37□□□□□ -0.91
LINC01397-201ENST00000554808 CPA1P15085 419 aa9.37□□□□□ -0.91
LINC01397-201ENST00000554808 DSG3P32926 999 aa9.37□□□□□ -0.91
LINC01397-201ENST00000554808 AK2P54819 239 aa9.37□□□□□ -0.91
LINC01397-201ENST00000554808 HERVK_113P62684 666 aa9.37□□□□□ -0.91
LINC01397-201ENST00000554808 CCNA1P78396 465 aa9.37□□□□□ -0.91
LINC01397-201ENST00000554808 RTN1Q16799 776 aa9.37□□□□□ -0.91
LINC01397-201ENST00000554808 FAM110CQ1W6H9 321 aa9.37□□□□□ -0.91
LINC01397-201ENST00000554808 TREML2Q5T2D2 321 aa9.37□□□□□ -0.91
LINC01397-201ENST00000554808 FANCBQ8NB91 859 aa9.37□□□□□ -0.91
LINC01397-201ENST00000554808 NKX2-3Q8TAU0 364 aa9.37□□□□□ -0.91
LINC01397-201ENST00000554808 NUP133Q8WUM0 1156 aa9.37□□□□□ -0.91
LINC01397-201ENST00000554808 TCEANC2Q96MN5 208 aa9.37□□□□□ -0.91
LINC01397-201ENST00000554808 PTPN18Q99952 460 aa9.37□□□□□ -0.91
LINC01397-201ENST00000554808 SPZ1Q9BXG8 430 aa9.37□□□□□ -0.91
LINC01397-201ENST00000554808 MAF1Q9H063 256 aa9.37□□□□□ -0.91
LINC01397-201ENST00000554808 MAD2L2Q9UI95 211 aa9.37□□□□□ -0.91
LINC01397-201ENST00000554808 ADAMTS5Q9UNA0 930 aa9.37□□□□□ -0.91
LINC01397-201ENST00000554808 LIMCH1Q9UPQ0 1083 aa9.37□□□□□ -0.91
LINC01397-201ENST00000554808 RABGAP1Q9Y3P9 1069 aa9.37□□□□□ -0.91
LINC01397-201ENST00000554808 CENPFP49454 3210 aa9.37□□□□□ -0.91
LINC01397-201ENST00000554808 ZSWIM8A7E2V4 1837 aa9.36□□□□□ -0.91
LINC01397-201ENST00000554808 SPDYE16A6NNV3 312 aaPredicted RBP9.36□□□□□ -0.91
LINC01397-201ENST00000554808 KLRF2D3W0D1 207 aa9.36□□□□□ -0.91
LINC01397-201ENST00000554808 hCG_1984214I3L0E3 225 aa9.36□□□□□ -0.91
LINC01397-201ENST00000554808 CPLX1O14810 134 aa9.36□□□□□ -0.91
LINC01397-201ENST00000554808 ATP2A1O14983 1001 aa9.36□□□□□ -0.91
LINC01397-201ENST00000554808 ZBED4O75132 1171 aa9.36□□□□□ -0.91
LINC01397-201ENST00000554808 APOBRQ0VD83 1088 aa9.36□□□□□ -0.91
LINC01397-201ENST00000554808 ARHGEF6Q15052 776 aa9.36□□□□□ -0.91
LINC01397-201ENST00000554808 KIAA1755Q5JYT7 1200 aa9.36□□□□□ -0.91
LINC01397-201ENST00000554808 SYDE2Q5VT97 1194 aa9.36□□□□□ -0.91
LINC01397-201ENST00000554808 KCTD1Q719H9 257 aa9.36□□□□□ -0.91
LINC01397-201ENST00000554808 TEX2Q8IWB9 1127 aa9.36□□□□□ -0.91
LINC01397-201ENST00000554808 ZNF713Q8N859 430 aaPredicted RBP9.36□□□□□ -0.91
LINC01397-201ENST00000554808 ZIC5Q96T25 663 aa9.36□□□□□ -0.91
LINC01397-201ENST00000554808 SLKQ9H2G2 1235 aaPredicted RBP9.36□□□□□ -0.91
LINC01397-201ENST00000554808 SEC63Q9UGP8 760 aaKnown RBP9.36□□□□□ -0.91
LINC01397-201ENST00000554808 NAP1L2Q9ULW6 460 aaPredicted RBP9.36□□□□□ -0.91
LINC01397-201ENST00000554808 MTMR7Q9Y216 660 aa9.36□□□□□ -0.91
LINC01397-201ENST00000554808 ADGRA2Q96PE1 1338 aa9.35□□□□□ -0.91
LINC01397-201ENST00000554808 WDR81Q562E7 1941 aa9.35□□□□□ -0.91
LINC01397-201ENST00000554808 VWA5AO00534 786 aa9.35□□□□□ -0.91
LINC01397-201ENST00000554808 SLC25A27O95847 323 aa9.35□□□□□ -0.91
LINC01397-201ENST00000554808 PDIA3P30101 505 aaKnown RBP9.35□□□□□ -0.91
LINC01397-201ENST00000554808 CRHR2Q13324 411 aa9.35□□□□□ -0.91
LINC01397-201ENST00000554808 KIF22Q14807 665 aa9.35□□□□□ -0.91
LINC01397-201ENST00000554808 TKFCQ3LXA3 575 aa9.35□□□□□ -0.91
LINC01397-201ENST00000554808 TRIM22Q8IYM9 498 aa9.35□□□□□ -0.91
LINC01397-201ENST00000554808 FAM177A1Q8N128 213 aaPredicted RBP9.35□□□□□ -0.91
LINC01397-201ENST00000554808 NUP88Q99567 741 aaPredicted RBP9.35□□□□□ -0.91
LINC01397-201ENST00000554808 RNF26Q9BY78 433 aaPredicted RBP9.35□□□□□ -0.91
LINC01397-201ENST00000554808 RANBP17Q9H2T7 1088 aaKnown RBP9.35□□□□□ -0.91
LINC01397-201ENST00000554808 RIOX1Q9H6W3 641 aa9.35□□□□□ -0.91
LINC01397-201ENST00000554808 SLC38A10Q9HBR0 1119 aa9.35□□□□□ -0.91
LINC01397-201ENST00000554808 SENP2Q9HC62 589 aa9.35□□□□□ -0.91
LINC01397-201ENST00000554808 GPCPD1Q9NPB8 672 aa9.35□□□□□ -0.91
LINC01397-201ENST00000554808 MORF4L1Q9UBU8 362 aa9.35□□□□□ -0.91
LINC01397-201ENST00000554808 BRPF3Q9ULD4 1205 aa9.35□□□□□ -0.91
LINC01397-201ENST00000554808 FRMPD2Q68DX3 1309 aaPredicted RBP9.34□□□□□ -0.91
LINC01397-201ENST00000554808 LRRC37A2A6NM11 1700 aa9.34□□□□□ -0.91
LINC01397-201ENST00000554808 ZBTB5O15062 677 aa9.34□□□□□ -0.91
LINC01397-201ENST00000554808 PFKFB2O60825 505 aa9.34□□□□□ -0.91
LINC01397-201ENST00000554808 BCRP11274 1271 aa9.34□□□□□ -0.91
LINC01397-201ENST00000554808 ERVK-9P63128 1117 aa9.34□□□□□ -0.91
LINC01397-201ENST00000554808 ERVK-24P63145 666 aa9.34□□□□□ -0.91
LINC01397-201ENST00000554808 AKAP17AQ02040 695 aaKnown RBP9.34□□□□□ -0.91
LINC01397-201ENST00000554808 DGKZQ13574 1117 aa9.34□□□□□ -0.91
LINC01397-201ENST00000554808 COL9A3Q14050 684 aaPredicted RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms