RNA–Protein interactions for RNA: ENST00000554624.5

PSMC1-204, Transcript of proteasome 26S subunit, ATPase 1, humanhuman

TSL 2

Gene PSMC1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC1-204ENST00000554624 OGDHLQ9ULD0 1010 aa12.1□□□□□ -0.47
PSMC1-204ENST00000554624 RABGAP1Q9Y3P9 1069 aa12.1□□□□□ -0.47
PSMC1-204ENST00000554624 RGS2P41220 211 aa12.09□□□□□ -0.47
PSMC1-204ENST00000554624 HNRNPUQ00839 825 aaKnown RBP eCLIP12.09□□□□□ -0.47
PSMC1-204ENST00000554624 KCNH2Q12809 1159 aa12.09□□□□□ -0.47
PSMC1-204ENST00000554624 PLEKHH3Q7Z736 793 aa12.09□□□□□ -0.47
PSMC1-204ENST00000554624 MIGA1Q8NAN2 632 aa12.09□□□□□ -0.47
PSMC1-204ENST00000554624 LRRN4Q8WUT4 740 aa12.09□□□□□ -0.47
PSMC1-204ENST00000554624 USP6NLQ92738 828 aa12.09□□□□□ -0.47
PSMC1-204ENST00000554624 KIAA1683Q9H0B3 1180 aa12.09□□□□□ -0.47
PSMC1-204ENST00000554624 C1orf115Q9H7X2 142 aa12.09□□□□□ -0.47
PSMC1-204ENST00000554624 CWC22Q9HCG8 908 aaKnown RBP12.09□□□□□ -0.47
PSMC1-204ENST00000554624 TXNRD2Q9NNW7 524 aa12.09□□□□□ -0.47
PSMC1-204ENST00000554624 PRM3Q9NNZ6 103 aa12.09□□□□□ -0.47
PSMC1-204ENST00000554624 STAP2Q9UGK3 403 aa12.09□□□□□ -0.47
PSMC1-204ENST00000554624 FCF1Q9Y324 198 aaKnown RBP12.09□□□□□ -0.47
PSMC1-204ENST00000554624 ZSWIM8A7E2V4 1837 aa12.09□□□□□ -0.47
PSMC1-204ENST00000554624 POLR3DP05423 398 aaPredicted RBP12.08□□□□□ -0.48
PSMC1-204ENST00000554624 ZKSCAN1P17029 563 aaPredicted RBP12.08□□□□□ -0.48
PSMC1-204ENST00000554624 ABCB5Q2M3G0 1257 aa12.08□□□□□ -0.48
PSMC1-204ENST00000554624 CEP85Q6P2H3 762 aa12.08□□□□□ -0.48
PSMC1-204ENST00000554624 CATSPERGQ6ZRH7 1159 aa12.08□□□□□ -0.48
PSMC1-204ENST00000554624 GPR142Q7Z601 462 aa12.08□□□□□ -0.48
PSMC1-204ENST00000554624 AACSQ86V21 672 aa12.08□□□□□ -0.48
PSMC1-204ENST00000554624 TRIB2Q92519 343 aa12.08□□□□□ -0.48
PSMC1-204ENST00000554624 EDC3Q96F86 508 aaKnown RBP12.08□□□□□ -0.48
PSMC1-204ENST00000554624 FEZ1Q99689 392 aa12.08□□□□□ -0.48
PSMC1-204ENST00000554624 C11orf49Q9H6J7 331 aa12.08□□□□□ -0.48
PSMC1-204ENST00000554624 HOXC10Q9NYD6 342 aa12.08□□□□□ -0.48
PSMC1-204ENST00000554624 DOCK2Q92608 1830 aa12.08□□□□□ -0.48
PSMC1-204ENST00000554624 MAGEB6P1A0A0J9YX57 407 aa12.07□□□□□ -0.48
PSMC1-204ENST00000554624 RLBP1P12271 317 aa12.07□□□□□ -0.48
PSMC1-204ENST00000554624 CACNB2Q08289 660 aaPredicted RBP12.07□□□□□ -0.48
PSMC1-204ENST00000554624 TRIM32Q13049 653 aa12.07□□□□□ -0.48
PSMC1-204ENST00000554624 RAB3GAP1Q15042 981 aa12.07□□□□□ -0.48
PSMC1-204ENST00000554624 LBX2Q6XYB7 198 aa12.07□□□□□ -0.48
PSMC1-204ENST00000554624 RPAP2Q8IXW5 612 aaPredicted RBP12.07□□□□□ -0.48
PSMC1-204ENST00000554624 CLASRPQ8N2M8 674 aaKnown RBP12.07□□□□□ -0.48
PSMC1-204ENST00000554624 PNMA1Q8ND90 353 aa12.07□□□□□ -0.48
PSMC1-204ENST00000554624 PAGR1Q9BTK6 254 aa12.07□□□□□ -0.48
PSMC1-204ENST00000554624 CHMP4BQ9H444 224 aaKnown RBP12.07□□□□□ -0.48
PSMC1-204ENST00000554624 ANTXR1Q9H6X2 564 aa12.07□□□□□ -0.48
PSMC1-204ENST00000554624 TLR7Q9NYK1 1049 aaKnown RBP12.07□□□□□ -0.48
PSMC1-204ENST00000554624 RANBP2P49792 3224 aaKnown RBP12.07□□□□□ -0.48
PSMC1-204ENST00000554624 DOCK1Q14185 1865 aa12.06□□□□□ -0.48
PSMC1-204ENST00000554624 SLC15A5A6NIM6 579 aa12.06□□□□□ -0.48
PSMC1-204ENST00000554624 HMMRO75330 724 aa12.06□□□□□ -0.48
PSMC1-204ENST00000554624 SHROOM1Q2M3G4 852 aaPredicted RBP12.06□□□□□ -0.48
PSMC1-204ENST00000554624 SLC9C2Q5TAH2 1124 aa12.06□□□□□ -0.48
PSMC1-204ENST00000554624 MFSD14CQ5VZR4 134 aa12.06□□□□□ -0.48
PSMC1-204ENST00000554624 DIS3LQ8TF46 1054 aaKnown RBP12.06□□□□□ -0.48
PSMC1-204ENST00000554624 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.06□□□□□ -0.48
PSMC1-204ENST00000554624 GDF15Q99988 308 aa12.06□□□□□ -0.48
PSMC1-204ENST00000554624 RIOK1Q9BRS2 568 aaKnown RBP12.06□□□□□ -0.48
PSMC1-204ENST00000554624 CRNKL1Q9BZJ0 848 aaKnown RBP12.06□□□□□ -0.48
PSMC1-204ENST00000554624 PORCNQ9H237 461 aa12.06□□□□□ -0.48
PSMC1-204ENST00000554624 EXOC6BQ9Y2D4 811 aa12.06□□□□□ -0.48
PSMC1-204ENST00000554624 IVNS1ABPQ9Y6Y0 642 aa12.06□□□□□ -0.48
PSMC1-204ENST00000554624 STRNO43815 780 aa12.05□□□□□ -0.48
PSMC1-204ENST00000554624 RAB11FIP3O75154 756 aa12.05□□□□□ -0.48
PSMC1-204ENST00000554624 HOXC6P09630 235 aa12.05□□□□□ -0.48
PSMC1-204ENST00000554624 IFIT2P09913 472 aaKnown RBP12.05□□□□□ -0.48
PSMC1-204ENST00000554624 CTHP32929 405 aa12.05□□□□□ -0.48
PSMC1-204ENST00000554624 PLCD1P51178 756 aa12.05□□□□□ -0.48
PSMC1-204ENST00000554624 COG2Q14746 738 aa12.05□□□□□ -0.48
PSMC1-204ENST00000554624 C7orf61Q8IZ16 206 aa12.05□□□□□ -0.48
PSMC1-204ENST00000554624 ARMC2Q8NEN0 867 aa12.05□□□□□ -0.48
PSMC1-204ENST00000554624 RHPN1Q8TCX5 695 aa12.05□□□□□ -0.48
PSMC1-204ENST00000554624 KIF1BPQ96EK5 621 aa12.05□□□□□ -0.48
PSMC1-204ENST00000554624 APBA2Q99767 749 aa12.05□□□□□ -0.48
PSMC1-204ENST00000554624 PHIPQ8WWQ0 1821 aa12.04□□□□□ -0.48
PSMC1-204ENST00000554624 MSCO60682 206 aa12.04□□□□□ -0.48
PSMC1-204ENST00000554624 PEX10O60683 326 aa12.04□□□□□ -0.48
PSMC1-204ENST00000554624 VCAM1P19320 739 aa12.04□□□□□ -0.48
PSMC1-204ENST00000554624 SHMT1P34896 483 aa12.04□□□□□ -0.48
PSMC1-204ENST00000554624 ATP2B2Q01814 1243 aa12.04□□□□□ -0.48
PSMC1-204ENST00000554624 GABPAQ06546 454 aa12.04□□□□□ -0.48
PSMC1-204ENST00000554624 ZYXQ15942 572 aaKnown RBP12.04□□□□□ -0.48
PSMC1-204ENST00000554624 ACER1Q8TDN7 264 aa12.04□□□□□ -0.48
PSMC1-204ENST00000554624 MCM9Q9NXL9 1143 aa12.04□□□□□ -0.48
PSMC1-204ENST00000554624 SWAP70Q9UH65 585 aa12.04□□□□□ -0.48
PSMC1-204ENST00000554624 NDUFB9Q9Y6M9 179 aa12.04□□□□□ -0.48
PSMC1-204ENST00000554624 SZT2Q5T011 3432 aa12.03□□□□□ -0.48
PSMC1-204ENST00000554624 CNMDO75829 334 aa12.03□□□□□ -0.48
PSMC1-204ENST00000554624 COL6A1P12109 1028 aa12.03□□□□□ -0.48
PSMC1-204ENST00000554624 PDE6AP16499 860 aa12.03□□□□□ -0.48
PSMC1-204ENST00000554624 NR6A1Q15406 480 aa12.03□□□□□ -0.48
PSMC1-204ENST00000554624 CCL14Q16627 93 aa12.03□□□□□ -0.48
PSMC1-204ENST00000554624 WDR78Q5VTH9 848 aa12.03□□□□□ -0.48
PSMC1-204ENST00000554624 PANK1Q8TE04 598 aa12.03□□□□□ -0.48
PSMC1-204ENST00000554624 RPAP3Q9H6T3 665 aaPredicted RBP12.03□□□□□ -0.48
PSMC1-204ENST00000554624 IL1RAPL2Q9NP60 686 aa12.03□□□□□ -0.48
PSMC1-204ENST00000554624 SLC5A4Q9NY91 659 aa12.03□□□□□ -0.48
PSMC1-204ENST00000554624 MAP10Q9P2G4 905 aa12.03□□□□□ -0.48
PSMC1-204ENST00000554624 ZMYND8Q9ULU4 1186 aaPredicted RBP12.03□□□□□ -0.48
PSMC1-204ENST00000554624 MGAMO43451 1857 aa12.03□□□□□ -0.48
PSMC1-204ENST00000554624 MPHOSPH10O00566 681 aaKnown RBP12.02□□□□□ -0.49
PSMC1-204ENST00000554624 ZBTB24O43167 697 aaPredicted RBP12.02□□□□□ -0.49
PSMC1-204ENST00000554624 CCND3P30281 292 aaPredicted RBP12.02□□□□□ -0.49
PSMC1-204ENST00000554624 GRB14Q14449 540 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms