RNA–Protein interactions for RNA: ENST00000554357.5

TRIP11-202, Transcript of thyroid hormone receptor interactor 11, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIP11, Length 5,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP11-202ENST00000554357 DNAJB7Q7Z6W7 309 aaPredicted RBP3.56□□□□□ -1.84
TRIP11-202ENST00000554357 CHD1LQ86WJ1 897 aa3.56□□□□□ -1.84
TRIP11-202ENST00000554357 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.56□□□□□ -1.84
TRIP11-202ENST00000554357 ARMC2Q8NEN0 867 aa3.56□□□□□ -1.84
TRIP11-202ENST00000554357 GABPB2Q8TAK5 448 aaPredicted RBP3.56□□□□□ -1.84
TRIP11-202ENST00000554357 APPBP2Q92624 585 aa3.56□□□□□ -1.84
TRIP11-202ENST00000554357 MTBPQ96DY7 904 aa3.56□□□□□ -1.84
TRIP11-202ENST00000554357 STARD7Q9NQZ5 370 aa3.56□□□□□ -1.84
TRIP11-202ENST00000554357 RUVBL1Q9Y265 456 aaKnown RBP3.56□□□□□ -1.84
TRIP11-202ENST00000554357 SLC9A8Q9Y2E8 581 aa3.56□□□□□ -1.84
TRIP11-202ENST00000554357 SCAMP3O14828 347 aaKnown RBP3.56□□□□□ -1.84
TRIP11-202ENST00000554357 FKTNO75072 461 aa3.56□□□□□ -1.84
TRIP11-202ENST00000554357 MX2P20592 715 aa3.56□□□□□ -1.84
TRIP11-202ENST00000554357 VPS41P49754 854 aa3.56□□□□□ -1.84
TRIP11-202ENST00000554357 NR5A1Q13285 461 aa3.56□□□□□ -1.84
TRIP11-202ENST00000554357 STIM1Q13586 685 aa3.56□□□□□ -1.84
TRIP11-202ENST00000554357 SCARF1Q14162 830 aa3.56□□□□□ -1.84
TRIP11-202ENST00000554357 FOXR2Q6PJQ5 311 aa3.56□□□□□ -1.84
TRIP11-202ENST00000554357 CRELD2Q6UXH1 353 aaPredicted RBP3.56□□□□□ -1.84
TRIP11-202ENST00000554357 MIER3Q7Z3K6 550 aa3.56□□□□□ -1.84
TRIP11-202ENST00000554357 SUN3Q8TAQ9 357 aa3.56□□□□□ -1.84
TRIP11-202ENST00000554357 UBLCP1Q8WVY7 318 aaPredicted RBP3.56□□□□□ -1.84
TRIP11-202ENST00000554357 BACH2Q9BYV9 841 aa3.56□□□□□ -1.84
TRIP11-202ENST00000554357 PPP1R12CQ9BZL4 782 aa3.56□□□□□ -1.84
TRIP11-202ENST00000554357 GBP3Q9H0R5 595 aa3.56□□□□□ -1.84
TRIP11-202ENST00000554357 SACM1LQ9NTJ5 587 aa3.56□□□□□ -1.84
TRIP11-202ENST00000554357 USP40Q9NVE5 1235 aa3.56□□□□□ -1.84
TRIP11-202ENST00000554357 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.55□□□□□ -1.84
TRIP11-202ENST00000554357 DYNC1I1O14576 645 aa3.55□□□□□ -1.84
TRIP11-202ENST00000554357 SYN3O14994 580 aa3.55□□□□□ -1.84
TRIP11-202ENST00000554357 ONECUT3O60422 494 aaPredicted RBP3.55□□□□□ -1.84
TRIP11-202ENST00000554357 TOM1O60784 492 aa3.55□□□□□ -1.84
TRIP11-202ENST00000554357 NFATC1O95644 943 aa3.55□□□□□ -1.84
TRIP11-202ENST00000554357 NUDT7P0C024 238 aa3.55□□□□□ -1.84
TRIP11-202ENST00000554357 MSL3P1P0C860 447 aa3.55□□□□□ -1.84
TRIP11-202ENST00000554357 LCP1P13796 627 aa3.55□□□□□ -1.84
TRIP11-202ENST00000554357 DESP17661 470 aa3.55□□□□□ -1.84
TRIP11-202ENST00000554357 SDSP20132 328 aa3.55□□□□□ -1.84
TRIP11-202ENST00000554357 CALB2P22676 271 aa3.55□□□□□ -1.84
TRIP11-202ENST00000554357 HOXC8P31273 242 aa3.55□□□□□ -1.84
TRIP11-202ENST00000554357 LIG3P49916 1009 aa3.55□□□□□ -1.84
TRIP11-202ENST00000554357 KIF11P52732 1056 aa3.55□□□□□ -1.84
TRIP11-202ENST00000554357 CLNS1AP54105 237 aaKnown RBP3.55□□□□□ -1.84
TRIP11-202ENST00000554357 ATXN3P54252 364 aaPredicted RBP3.55□□□□□ -1.84
TRIP11-202ENST00000554357 GFPT1Q06210 699 aaPredicted RBP3.55□□□□□ -1.84
TRIP11-202ENST00000554357 NFX1Q12986 1120 aaKnown RBP3.55□□□□□ -1.84
TRIP11-202ENST00000554357 MRPL28Q13084 256 aaKnown RBP3.55□□□□□ -1.84
TRIP11-202ENST00000554357 CNPY1Q3B7I2 92 aa3.55□□□□□ -1.84
TRIP11-202ENST00000554357 HEATR6Q6AI08 1181 aaKnown RBP3.55□□□□□ -1.84
TRIP11-202ENST00000554357 NXNQ6DKJ4 435 aa3.55□□□□□ -1.84
TRIP11-202ENST00000554357 EFHBQ8N7U6 833 aa3.55□□□□□ -1.84
TRIP11-202ENST00000554357 ABTB2Q8N961 1025 aa3.55□□□□□ -1.84
TRIP11-202ENST00000554357 PPFIBP2Q8ND30 876 aa3.55□□□□□ -1.84
TRIP11-202ENST00000554357 PRR7Q8TB68 274 aa3.55□□□□□ -1.84
TRIP11-202ENST00000554357 LRRN4Q8WUT4 740 aa3.55□□□□□ -1.84
TRIP11-202ENST00000554357 IFT81Q8WYA0 676 aa3.55□□□□□ -1.84
TRIP11-202ENST00000554357 LZICQ8WZA0 190 aa3.55□□□□□ -1.84
TRIP11-202ENST00000554357 CEP19Q96LK0 163 aa3.55□□□□□ -1.84
TRIP11-202ENST00000554357 NSUN5Q96P11 429 aaKnown RBP3.55□□□□□ -1.84
TRIP11-202ENST00000554357 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.55□□□□□ -1.84
TRIP11-202ENST00000554357 PALMDQ9NP74 551 aa3.55□□□□□ -1.84
TRIP11-202ENST00000554357 PPANQ9NQ55 473 aaKnown RBP3.55□□□□□ -1.84
TRIP11-202ENST00000554357 MAN1C1Q9NR34 630 aa3.55□□□□□ -1.84
TRIP11-202ENST00000554357 KLHL42Q9P2K6 505 aa3.55□□□□□ -1.84
TRIP11-202ENST00000554357 AFF4Q9UHB7 1163 aaKnown RBP3.55□□□□□ -1.84
TRIP11-202ENST00000554357 CCDC66A2RUB6 948 aa3.55□□□□□ -1.84
TRIP11-202ENST00000554357 UBAP1LF5GYI3 381 aa3.55□□□□□ -1.84
TRIP11-202ENST00000554357 CASC3O15234 703 aaKnown RBP3.55□□□□□ -1.84
TRIP11-202ENST00000554357 GPC4O75487 556 aa3.55□□□□□ -1.84
TRIP11-202ENST00000554357 C6orf222P0C671 652 aaPredicted RBP3.55□□□□□ -1.84
TRIP11-202ENST00000554357 NDUFV2P19404 249 aa3.55□□□□□ -1.84
TRIP11-202ENST00000554357 NOP14P78316 857 aaKnown RBP3.55□□□□□ -1.84
TRIP11-202ENST00000554357 FKBP4Q02790 459 aaKnown RBP eCLIP3.55□□□□□ -1.84
TRIP11-202ENST00000554357 SNX1Q13596 522 aa3.55□□□□□ -1.84
TRIP11-202ENST00000554357 SAFBQ15424 915 aaKnown RBP eCLIP3.55□□□□□ -1.84
TRIP11-202ENST00000554357 EPC2Q52LR7 807 aa3.55□□□□□ -1.84
TRIP11-202ENST00000554357 TTC39AQ5SRH9 613 aa3.55□□□□□ -1.84
TRIP11-202ENST00000554357 PET117Q6UWS5 81 aa3.55□□□□□ -1.84
TRIP11-202ENST00000554357 TAOK1Q7L7X3 1001 aa3.55□□□□□ -1.84
TRIP11-202ENST00000554357 TTC7BQ86TV6 843 aa3.55□□□□□ -1.84
TRIP11-202ENST00000554357 SLF2Q8IX21 1173 aa3.55□□□□□ -1.84
TRIP11-202ENST00000554357 SETD6Q8TBK2 473 aa3.55□□□□□ -1.84
TRIP11-202ENST00000554357 LUC7LQ9NQ29 371 aaKnown RBP3.55□□□□□ -1.84
TRIP11-202ENST00000554357 PNO1Q9NRX1 252 aaKnown RBP3.55□□□□□ -1.84
TRIP11-202ENST00000554357 SCHIP1Q9P0W5 487 aaPredicted RBP3.55□□□□□ -1.84
TRIP11-202ENST00000554357 TESQ9UGI8 421 aaKnown RBP3.55□□□□□ -1.84
TRIP11-202ENST00000554357 MTO1Q9Y2Z2 717 aaKnown RBP3.55□□□□□ -1.84
TRIP11-202ENST00000554357 RIPOR2Q9Y4F9 1068 aa3.55□□□□□ -1.84
TRIP11-202ENST00000554357 PPME1Q9Y570 386 aa3.55□□□□□ -1.84
TRIP11-202ENST00000554357 PRR23AA6NEV1 266 aa3.55□□□□□ -1.84
TRIP11-202ENST00000554357 POM121CA8CG34 1229 aa3.55□□□□□ -1.84
TRIP11-202ENST00000554357 RNF8O76064 485 aa3.55□□□□□ -1.84
TRIP11-202ENST00000554357 IVLP07476 585 aa3.55□□□□□ -1.84
TRIP11-202ENST00000554357 KRT5P13647 590 aa3.55□□□□□ -1.84
TRIP11-202ENST00000554357 HSPA1LP34931 641 aa3.55□□□□□ -1.84
TRIP11-202ENST00000554357 GUCY2FP51841 1108 aa3.55□□□□□ -1.84
TRIP11-202ENST00000554357 OSTNP61366 133 aa3.55□□□□□ -1.84
TRIP11-202ENST00000554357 SLC20A2Q08357 652 aa3.55□□□□□ -1.84
TRIP11-202ENST00000554357 G3BP1Q13283 466 aaKnown RBP eCLIP3.55□□□□□ -1.84
TRIP11-202ENST00000554357 BYSLQ13895 437 aaKnown RBP3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms