RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 AKR1B1P15121 316 aa9.87□□□□□ -0.83
PSEN1-209ENST00000553855 USP17L24Q0WX57 530 aa9.87□□□□□ -0.83
PSEN1-209ENST00000553855 DMRTA1Q5VZB9 504 aa9.87□□□□□ -0.83
PSEN1-209ENST00000553855 KIAA1211Q6ZU35 1233 aa9.87□□□□□ -0.83
PSEN1-209ENST00000553855 CD99L2Q8TCZ2 262 aa9.87□□□□□ -0.83
PSEN1-209ENST00000553855 MCOLN1Q9GZU1 580 aa9.87□□□□□ -0.83
PSEN1-209ENST00000553855 PPP4R2Q9NY27 417 aa9.87□□□□□ -0.83
PSEN1-209ENST00000553855 ROBO3Q96MS0 1386 aa9.87□□□□□ -0.83
PSEN1-209ENST00000553855 RANBP6O60518 1105 aaKnown RBP9.86□□□□□ -0.83
PSEN1-209ENST00000553855 KDM4AO75164 1064 aa9.86□□□□□ -0.83
PSEN1-209ENST00000553855 PRDM1O75626 825 aa9.86□□□□□ -0.83
PSEN1-209ENST00000553855 AP1G2O75843 785 aa9.86□□□□□ -0.83
PSEN1-209ENST00000553855 PCP11498 1178 aaKnown RBP9.86□□□□□ -0.83
PSEN1-209ENST00000553855 GSPT1P15170 499 aaKnown RBP9.86□□□□□ -0.83
PSEN1-209ENST00000553855 HOXA7P31268 230 aaPredicted RBP9.86□□□□□ -0.83
PSEN1-209ENST00000553855 PRMT2P55345 433 aa9.86□□□□□ -0.83
PSEN1-209ENST00000553855 FCGRTP55899 365 aa9.86□□□□□ -0.83
PSEN1-209ENST00000553855 JAG1P78504 1218 aa9.86□□□□□ -0.83
PSEN1-209ENST00000553855 MOGSQ13724 837 aa9.86□□□□□ -0.83
PSEN1-209ENST00000553855 IMMTQ16891 758 aaKnown RBP9.86□□□□□ -0.83
PSEN1-209ENST00000553855 RRP12Q5JTH9 1297 aaKnown RBP9.86□□□□□ -0.83
PSEN1-209ENST00000553855 TREML2Q5T2D2 321 aa9.86□□□□□ -0.83
PSEN1-209ENST00000553855 VPS53Q5VIR6 699 aa9.86□□□□□ -0.83
PSEN1-209ENST00000553855 PRPF38BQ5VTL8 546 aaKnown RBP9.86□□□□□ -0.83
PSEN1-209ENST00000553855 C17orf99Q6UX52 265 aa9.86□□□□□ -0.83
PSEN1-209ENST00000553855 LPAR1Q92633 364 aa9.86□□□□□ -0.83
PSEN1-209ENST00000553855 C12orf42Q96LP6 360 aa9.86□□□□□ -0.83
PSEN1-209ENST00000553855 TANGO6Q9C0B7 1094 aa9.86□□□□□ -0.83
PSEN1-209ENST00000553855 ASCC2Q9H1I8 757 aaPredicted RBP9.86□□□□□ -0.83
PSEN1-209ENST00000553855 R3HDMLQ9H3Y0 253 aa9.86□□□□□ -0.83
PSEN1-209ENST00000553855 ISY1Q9ULR0 285 aaKnown RBP9.86□□□□□ -0.83
PSEN1-209ENST00000553855 CTDP1Q9Y5B0 961 aaPredicted RBP9.86□□□□□ -0.83
PSEN1-209ENST00000553855 ZMYM6O95789 1325 aa9.85□□□□□ -0.83
PSEN1-209ENST00000553855 CDK5RAP2Q96SN8 1893 aa9.85□□□□□ -0.83
PSEN1-209ENST00000553855 SMAPO00193 183 aa9.85□□□□□ -0.83
PSEN1-209ENST00000553855 FGAP02671 866 aa9.85□□□□□ -0.83
PSEN1-209ENST00000553855 EEF2P13639 858 aaKnown RBP9.85□□□□□ -0.83
PSEN1-209ENST00000553855 RASA1P20936 1047 aa9.85□□□□□ -0.83
PSEN1-209ENST00000553855 PSMC4P43686 418 aa9.85□□□□□ -0.83
PSEN1-209ENST00000553855 NT5C2P49902 561 aa9.85□□□□□ -0.83
PSEN1-209ENST00000553855 USP46P62068 366 aa9.85□□□□□ -0.83
PSEN1-209ENST00000553855 CCNA1P78396 465 aa9.85□□□□□ -0.83
PSEN1-209ENST00000553855 LACTBP83111 547 aaPredicted RBP9.85□□□□□ -0.83
PSEN1-209ENST00000553855 TFAP4Q01664 338 aa9.85□□□□□ -0.83
PSEN1-209ENST00000553855 CTDSPL2Q05D32 466 aa9.85□□□□□ -0.83
PSEN1-209ENST00000553855 SHROOM1Q2M3G4 852 aaPredicted RBP9.85□□□□□ -0.83
PSEN1-209ENST00000553855 PROX2Q3B8N5 592 aa9.85□□□□□ -0.83
PSEN1-209ENST00000553855 FBXO46Q6PJ61 603 aaPredicted RBP9.85□□□□□ -0.83
PSEN1-209ENST00000553855 MFSD6Q6ZSS7 791 aa9.85□□□□□ -0.83
PSEN1-209ENST00000553855 ZNF589Q86UQ0 364 aaPredicted RBP9.85□□□□□ -0.83
PSEN1-209ENST00000553855 SPNS2Q8IVW8 549 aa9.85□□□□□ -0.83
PSEN1-209ENST00000553855 ACER1Q8TDN7 264 aa9.85□□□□□ -0.83
PSEN1-209ENST00000553855 COA7Q96BR5 231 aa9.85□□□□□ -0.83
PSEN1-209ENST00000553855 DSCC1Q9BVC3 393 aa9.85□□□□□ -0.83
PSEN1-209ENST00000553855 HOXC10Q9NYD6 342 aa9.85□□□□□ -0.83
PSEN1-209ENST00000553855 NYAP2Q9P242 653 aa9.85□□□□□ -0.83
PSEN1-209ENST00000553855 ANAPC4Q9UJX5 808 aa9.85□□□□□ -0.83
PSEN1-209ENST00000553855 TMX2Q9Y320 296 aa9.85□□□□□ -0.83
PSEN1-209ENST00000553855 CCDC85CA6NKD9 419 aa9.84□□□□□ -0.83
PSEN1-209ENST00000553855 TNPO2O14787 897 aaKnown RBP9.84□□□□□ -0.83
PSEN1-209ENST00000553855 WDR46O15213 610 aaKnown RBP9.84□□□□□ -0.83
PSEN1-209ENST00000553855 TTLL1O95922 423 aa9.84□□□□□ -0.83
PSEN1-209ENST00000553855 VCAM1P19320 739 aa9.84□□□□□ -0.83
PSEN1-209ENST00000553855 CHMLP26374 656 aa9.84□□□□□ -0.83
PSEN1-209ENST00000553855 GUCY1A2P33402 732 aa9.84□□□□□ -0.83
PSEN1-209ENST00000553855 ABL2P42684 1182 aa9.84□□□□□ -0.83
PSEN1-209ENST00000553855 HERVK_113P62684 666 aa9.84□□□□□ -0.83
PSEN1-209ENST00000553855 TRDNQ13061 729 aa9.84□□□□□ -0.83
PSEN1-209ENST00000553855 FAM110CQ1W6H9 321 aa9.84□□□□□ -0.83
PSEN1-209ENST00000553855 CCDC178Q5BJE1 867 aa9.84□□□□□ -0.83
PSEN1-209ENST00000553855 ADGRD1Q6QNK2 874 aa9.84□□□□□ -0.83
PSEN1-209ENST00000553855 CATSPERGQ6ZRH7 1159 aa9.84□□□□□ -0.83
PSEN1-209ENST00000553855 OTOP1Q7RTM1 612 aa9.84□□□□□ -0.83
PSEN1-209ENST00000553855 NBPF11Q86T75 865 aa9.84□□□□□ -0.83
PSEN1-209ENST00000553855 ANKRD13CQ8N6S4 541 aa9.84□□□□□ -0.83
PSEN1-209ENST00000553855 GPRC5AQ8NFJ5 357 aa9.84□□□□□ -0.83
PSEN1-209ENST00000553855 NEDD1Q8NHV4 660 aa9.84□□□□□ -0.83
PSEN1-209ENST00000553855 ESR2Q92731 530 aa9.84□□□□□ -0.83
PSEN1-209ENST00000553855 ABHD8Q96I13 439 aa9.84□□□□□ -0.83
PSEN1-209ENST00000553855 PAGR1Q9BTK6 254 aa9.84□□□□□ -0.83
PSEN1-209ENST00000553855 RPAP3Q9H6T3 665 aaPredicted RBP9.84□□□□□ -0.83
PSEN1-209ENST00000553855 VCPKMTQ9H867 229 aa9.84□□□□□ -0.83
PSEN1-209ENST00000553855 CLIP2Q9UDT6 1046 aa9.84□□□□□ -0.83
PSEN1-209ENST00000553855 DDX60LQ5H9U9 1706 aaKnown RBP9.84□□□□□ -0.83
PSEN1-209ENST00000553855 ORC4O43929 436 aa9.83□□□□□ -0.84
PSEN1-209ENST00000553855 FLOT1O75955 427 aa9.83□□□□□ -0.84
PSEN1-209ENST00000553855 BCRP11274 1271 aa9.83□□□□□ -0.84
PSEN1-209ENST00000553855 GCGRP47871 477 aa9.83□□□□□ -0.84
PSEN1-209ENST00000553855 HAND2P61296 217 aa9.83□□□□□ -0.84
PSEN1-209ENST00000553855 COG2Q14746 738 aa9.83□□□□□ -0.84
PSEN1-209ENST00000553855 BMP2KLQ5H9B9 411 aa9.83□□□□□ -0.84
PSEN1-209ENST00000553855 FAM47AQ5JRC9 791 aa9.83□□□□□ -0.84
PSEN1-209ENST00000553855 AKNAD1Q5T1N1 836 aa9.83□□□□□ -0.84
PSEN1-209ENST00000553855 IQCA1Q86XH1 822 aa9.83□□□□□ -0.84
PSEN1-209ENST00000553855 RAET1EQ8TD07 263 aa9.83□□□□□ -0.84
PSEN1-209ENST00000553855 P2RX7Q99572 595 aaKnown RBP9.83□□□□□ -0.84
PSEN1-209ENST00000553855 CNNM2Q9H8M5 875 aa9.83□□□□□ -0.84
PSEN1-209ENST00000553855 SYNPO2Q9UMS6 1093 aa9.83□□□□□ -0.84
PSEN1-209ENST00000553855 STX8Q9UNK0 236 aa9.83□□□□□ -0.84
PSEN1-209ENST00000553855 SIPA1L1O43166 1804 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms