RNA–Protein interactions for RNA: ENST00000553801.1

SYNE2-211, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-211ENST00000553801 EPHB4P54760 987 aa21.26■□□□□ 0.99
SYNE2-211ENST00000553801 SYMPKQ92797 1274 aaKnown RBP21.26■□□□□ 0.99
SYNE2-211ENST00000553801 CHMP4BQ9H444 224 aaKnown RBP21.26■□□□□ 0.99
SYNE2-211ENST00000553801 ARPP21Q9UBL0 812 aaPredicted RBP21.26■□□□□ 0.99
SYNE2-211ENST00000553801 FAAP100Q0VG06 881 aa21.25■□□□□ 0.99
SYNE2-211ENST00000553801 SNRNP48Q6IEG0 339 aaKnown RBP21.25■□□□□ 0.99
SYNE2-211ENST00000553801 CTDP1Q9Y5B0 961 aaPredicted RBP21.25■□□□□ 0.99
SYNE2-211ENST00000553801 CCDC174Q6PII3 467 aa21.24■□□□□ 0.99
SYNE2-211ENST00000553801 MAMDC4Q6UXC1 1216 aa21.24■□□□□ 0.99
SYNE2-211ENST00000553801 SIRT2Q8IXJ6 389 aa21.24■□□□□ 0.99
SYNE2-211ENST00000553801 PRPF38AQ8NAV1 312 aaKnown RBP21.24■□□□□ 0.99
SYNE2-211ENST00000553801 KLHDC9Q8NEP7 349 aa21.24■□□□□ 0.99
SYNE2-211ENST00000553801 LENG1Q96BZ8 264 aaPredicted RBP21.24■□□□□ 0.99
SYNE2-211ENST00000553801 MKNK2Q9HBH9 465 aa21.24■□□□□ 0.99
SYNE2-211ENST00000553801 NYAP2Q9P242 653 aa21.24■□□□□ 0.99
SYNE2-211ENST00000553801 ZHX1Q9UKY1 873 aaPredicted RBP21.24■□□□□ 0.99
SYNE2-211ENST00000553801 MROH7Q68CQ1 1323 aa21.24■□□□□ 0.99
SYNE2-211ENST00000553801 SYNRGQ9UMZ2 1314 aa21.24■□□□□ 0.99
SYNE2-211ENST00000553801 MYH7P12883 1935 aa21.23■□□□□ 0.99
SYNE2-211ENST00000553801 ZBED4O75132 1171 aa21.23■□□□□ 0.99
SYNE2-211ENST00000553801 DUSP11O75319 330 aaKnown RBP21.23■□□□□ 0.99
SYNE2-211ENST00000553801 TIMP1P01033 207 aa21.23■□□□□ 0.99
SYNE2-211ENST00000553801 KCNA10Q16322 511 aa21.23■□□□□ 0.99
SYNE2-211ENST00000553801 ZNF467Q7Z7K2 595 aaPredicted RBP21.23■□□□□ 0.99
SYNE2-211ENST00000553801 PCSK9Q8NBP7 692 aaKnown RBP21.23■□□□□ 0.99
SYNE2-211ENST00000553801 GLT1D1Q96MS3 346 aa21.23■□□□□ 0.99
SYNE2-211ENST00000553801 PUS7LQ9H0K6 701 aaKnown RBP21.23■□□□□ 0.99
SYNE2-211ENST00000553801 SPC25Q9HBM1 224 aa21.23■□□□□ 0.99
SYNE2-211ENST00000553801 ZBTB40Q9NUA8 1239 aa21.23■□□□□ 0.99
SYNE2-211ENST00000553801 ELP1O95163 1332 aa21.23■□□□□ 0.99
SYNE2-211ENST00000553801 DNAJC25-GNG10A0A024R161 153 aa21.22■□□□□ 0.99
SYNE2-211ENST00000553801 F5H6K3 240 aa21.22■□□□□ 0.99
SYNE2-211ENST00000553801 ATP2A1O14983 1001 aa21.22■□□□□ 0.99
SYNE2-211ENST00000553801 SNAI1O95863 264 aaPredicted RBP21.22■□□□□ 0.99
SYNE2-211ENST00000553801 DNAJB2P25686 324 aa21.22■□□□□ 0.99
SYNE2-211ENST00000553801 KLRC3Q07444 240 aa21.22■□□□□ 0.99
SYNE2-211ENST00000553801 SBK1Q52WX2 424 aa21.22■□□□□ 0.99
SYNE2-211ENST00000553801 NUP88Q99567 741 aaPredicted RBP21.22■□□□□ 0.99
SYNE2-211ENST00000553801 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.22■□□□□ 0.99
SYNE2-211ENST00000553801 CHGBP05060 677 aa21.21■□□□□ 0.99
SYNE2-211ENST00000553801 CST5P28325 142 aaPredicted RBP21.21■□□□□ 0.99
SYNE2-211ENST00000553801 PPIGQ13427 754 aaKnown RBP eCLIP21.21■□□□□ 0.99
SYNE2-211ENST00000553801 CCSAPQ6IQ19 270 aaPredicted RBP21.21■□□□□ 0.99
SYNE2-211ENST00000553801 GIMAP6Q6P9H5 292 aa21.21■□□□□ 0.99
SYNE2-211ENST00000553801 VTI1AQ96AJ9 217 aa21.21■□□□□ 0.99
SYNE2-211ENST00000553801 NDUFB10O96000 172 aa21.2■□□□□ 0.98
SYNE2-211ENST00000553801 RASA1P20936 1047 aa21.2■□□□□ 0.98
SYNE2-211ENST00000553801 SLC4A3P48751 1232 aa21.2■□□□□ 0.98
SYNE2-211ENST00000553801 ACVR2BQ13705 512 aa21.2■□□□□ 0.98
SYNE2-211ENST00000553801 GRIN2CQ14957 1233 aa21.2■□□□□ 0.98
SYNE2-211ENST00000553801 MFSD5Q6N075 450 aa21.2■□□□□ 0.98
SYNE2-211ENST00000553801 CPXCR1Q8N123 301 aa21.2■□□□□ 0.98
SYNE2-211ENST00000553801 STRBPQ96SI9 672 aaKnown RBP21.2■□□□□ 0.98
SYNE2-211ENST00000553801 ABHD16BQ9H3Z7 469 aa21.2■□□□□ 0.98
SYNE2-211ENST00000553801 ZNF576Q9H609 170 aa21.2■□□□□ 0.98
SYNE2-211ENST00000553801 ZNF287Q9HBT7 754 aa21.2■□□□□ 0.98
SYNE2-211ENST00000553801 FBXO40Q9UH90 709 aa21.2■□□□□ 0.98
SYNE2-211ENST00000553801 TBX21Q9UL17 535 aa21.2■□□□□ 0.98
SYNE2-211ENST00000553801 COG6Q9Y2V7 657 aa21.2■□□□□ 0.98
SYNE2-211ENST00000553801 RIPK3Q9Y572 518 aa21.2■□□□□ 0.98
SYNE2-211ENST00000553801 C6orf222P0C671 652 aaPredicted RBP21.19■□□□□ 0.98
SYNE2-211ENST00000553801 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.19■□□□□ 0.98
SYNE2-211ENST00000553801 ANKRD35Q8N283 1001 aa21.19■□□□□ 0.98
SYNE2-211ENST00000553801 TIFAQ96CG3 184 aa21.19■□□□□ 0.98
SYNE2-211ENST00000553801 LRRCC1Q9C099 1032 aa21.19■□□□□ 0.98
SYNE2-211ENST00000553801 PRDM6Q9NQX0 595 aa21.19■□□□□ 0.98
SYNE2-211ENST00000553801 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.19■□□□□ 0.98
SYNE2-211ENST00000553801 CLIP2Q9UDT6 1046 aa21.19■□□□□ 0.98
SYNE2-211ENST00000553801 GREB1LQ9C091 1923 aaPredicted RBP21.18■□□□□ 0.98
SYNE2-211ENST00000553801 A0A0U1RQG5 324 aaPredicted RBP21.18■□□□□ 0.98
SYNE2-211ENST00000553801 MINDY4BA8MYZ0 360 aa21.18■□□□□ 0.98
SYNE2-211ENST00000553801 ASGR1P07306 291 aa21.18■□□□□ 0.98
SYNE2-211ENST00000553801 CDK7P50613 346 aa21.18■□□□□ 0.98
SYNE2-211ENST00000553801 ZNF444Q8N0Y2 327 aaPredicted RBP21.18■□□□□ 0.98
SYNE2-211ENST00000553801 CHST13Q8NET6 341 aa21.18■□□□□ 0.98
SYNE2-211ENST00000553801 KIFC2Q96AC6 838 aa21.18■□□□□ 0.98
SYNE2-211ENST00000553801 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.18■□□□□ 0.98
SYNE2-211ENST00000553801 FEM1BQ9UK73 627 aa21.18■□□□□ 0.98
SYNE2-211ENST00000553801 MYO9BQ13459 2157 aa21.18■□□□□ 0.98
SYNE2-211ENST00000553801 MYADML2A6NDP7 307 aa21.17■□□□□ 0.98
SYNE2-211ENST00000553801 GSG1L2A8MUP6 293 aa21.17■□□□□ 0.98
SYNE2-211ENST00000553801 TLR3O15455 904 aaKnown RBP21.17■□□□□ 0.98
SYNE2-211ENST00000553801 OAZ1P54368 228 aa21.17■□□□□ 0.98
SYNE2-211ENST00000553801 GJA9P57773 515 aa21.17■□□□□ 0.98
SYNE2-211ENST00000553801 GNASQ5JWF2 1037 aa21.17■□□□□ 0.98
SYNE2-211ENST00000553801 STK11IPQ8N1F8 1099 aa21.17■□□□□ 0.98
SYNE2-211ENST00000553801 TMEM199Q8N511 208 aa21.17■□□□□ 0.98
SYNE2-211ENST00000553801 UPF3AQ9H1J1 476 aaKnown RBP21.17■□□□□ 0.98
SYNE2-211ENST00000553801 SLC38A10Q9HBR0 1119 aa21.17■□□□□ 0.98
SYNE2-211ENST00000553801 RAVER2Q9HCJ3 691 aaKnown RBP21.17■□□□□ 0.98
SYNE2-211ENST00000553801 SYNPO2Q9UMS6 1093 aa21.17■□□□□ 0.98
SYNE2-211ENST00000553801 TTC28Q96AY4 2481 aa21.17■□□□□ 0.98
SYNE2-211ENST00000553801 ARVCFO00192 962 aa21.16■□□□□ 0.98
SYNE2-211ENST00000553801 FDX1P10109 184 aa21.16■□□□□ 0.98
SYNE2-211ENST00000553801 CCDC144BQ3MJ40 725 aa21.16■□□□□ 0.98
SYNE2-211ENST00000553801 TJAP1Q5JTD0 557 aa21.16■□□□□ 0.98
SYNE2-211ENST00000553801 TMEM240Q5SV17 173 aa21.16■□□□□ 0.98
SYNE2-211ENST00000553801 CCDC129Q6ZRS4 1044 aa21.16■□□□□ 0.98
SYNE2-211ENST00000553801 MKL1Q969V6 931 aa21.16■□□□□ 0.98
SYNE2-211ENST00000553801 GAS2L1Q99501 681 aaPredicted RBP21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms