RNA–Protein interactions for RNA: ENST00000553753.5

HNRNPC-208, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-208ENST00000553753 CHMP4CQ96CF2 233 aa12.04□□□□□ -0.48
HNRNPC-208ENST00000553753 TTC14Q96N46 770 aa12.04□□□□□ -0.48
HNRNPC-208ENST00000553753 DEFB118Q96PH6 123 aa12.04□□□□□ -0.48
HNRNPC-208ENST00000553753 TEX13BQ9BXU2 312 aa12.04□□□□□ -0.48
HNRNPC-208ENST00000553753 ISY1Q9ULR0 285 aaKnown RBP12.04□□□□□ -0.48
HNRNPC-208ENST00000553753 ATP2A1O14983 1001 aa12.03□□□□□ -0.48
HNRNPC-208ENST00000553753 SGSM2O43147 1006 aa12.03□□□□□ -0.48
HNRNPC-208ENST00000553753 ZBED4O75132 1171 aa12.03□□□□□ -0.48
HNRNPC-208ENST00000553753 PRKAR2AP13861 404 aaKnown RBP12.03□□□□□ -0.48
HNRNPC-208ENST00000553753 COPB2P35606 906 aa12.03□□□□□ -0.48
HNRNPC-208ENST00000553753 MAP3K21Q5TCX8 1036 aa12.03□□□□□ -0.48
HNRNPC-208ENST00000553753 RCSD1Q6JBY9 416 aa12.03□□□□□ -0.48
HNRNPC-208ENST00000553753 SHISA4Q96DD7 197 aa12.03□□□□□ -0.48
HNRNPC-208ENST00000553753 TMEM47Q9BQJ4 181 aa12.03□□□□□ -0.48
HNRNPC-208ENST00000553753 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.03□□□□□ -0.489e-29■■■■□ 21.1
HNRNPC-208ENST00000553753 SLC38A10Q9HBR0 1119 aa12.03□□□□□ -0.48
HNRNPC-208ENST00000553753 CTDP1Q9Y5B0 961 aaPredicted RBP12.03□□□□□ -0.48
HNRNPC-208ENST00000553753 PLA2G6O60733 806 aa12.02□□□□□ -0.48
HNRNPC-208ENST00000553753 KDM4AO75164 1064 aa12.02□□□□□ -0.48
HNRNPC-208ENST00000553753 NEFLP07196 543 aa12.02□□□□□ -0.48
HNRNPC-208ENST00000553753 FDX1P10109 184 aa12.02□□□□□ -0.48
HNRNPC-208ENST00000553753 CAPN2P17655 700 aa12.02□□□□□ -0.48
HNRNPC-208ENST00000553753 PTH1RQ03431 593 aa12.02□□□□□ -0.48
HNRNPC-208ENST00000553753 CACNB2Q08289 660 aaPredicted RBP12.02□□□□□ -0.48
HNRNPC-208ENST00000553753 IKQ13123 557 aaPredicted RBP12.02□□□□□ -0.48
HNRNPC-208ENST00000553753 SNRNP48Q6IEG0 339 aaKnown RBP12.02□□□□□ -0.48
HNRNPC-208ENST00000553753 KCTD1Q719H9 257 aa12.02□□□□□ -0.48
HNRNPC-208ENST00000553753 FAM160B2Q86V87 743 aa12.02□□□□□ -0.48
HNRNPC-208ENST00000553753 SKAP1Q86WV1 359 aa12.02□□□□□ -0.48
HNRNPC-208ENST00000553753 IQCA1Q86XH1 822 aa12.02□□□□□ -0.48
HNRNPC-208ENST00000553753 CPXCR1Q8N123 301 aa12.02□□□□□ -0.48
HNRNPC-208ENST00000553753 NPLOC4Q8TAT6 608 aa12.02□□□□□ -0.48
HNRNPC-208ENST00000553753 SLC5A4Q9NY91 659 aa12.02□□□□□ -0.48
HNRNPC-208ENST00000553753 FLRT1Q9NZU1 646 aa12.02□□□□□ -0.48
HNRNPC-208ENST00000553753 ZSWIM5Q9P217 1185 aa12.02□□□□□ -0.48
HNRNPC-208ENST00000553753 MTMR7Q9Y216 660 aa12.02□□□□□ -0.48
HNRNPC-208ENST00000553753 LAMA4Q16363 1823 aa12.02□□□□□ -0.49
HNRNPC-208ENST00000553753 B4E1Z4 1266 aa12.02□□□□□ -0.49
HNRNPC-208ENST00000553753 COBLO75128 1261 aa12.02□□□□□ -0.49
HNRNPC-208ENST00000553753 TFRCP02786 760 aaKnown RBP12.02□□□□□ -0.49
HNRNPC-208ENST00000553753 OAZ1P54368 228 aa12.02□□□□□ -0.49
HNRNPC-208ENST00000553753 KCTD2Q14681 263 aa12.02□□□□□ -0.49
HNRNPC-208ENST00000553753 BMP2KLQ5H9B9 411 aa12.02□□□□□ -0.49
HNRNPC-208ENST00000553753 MFSD14CQ5VZR4 134 aa12.02□□□□□ -0.49
HNRNPC-208ENST00000553753 DGKHQ86XP1 1220 aa12.02□□□□□ -0.49
HNRNPC-208ENST00000553753 DCAF4Q8WV16 495 aa12.02□□□□□ -0.49
HNRNPC-208ENST00000553753 MMP19Q99542 508 aa12.02□□□□□ -0.49
HNRNPC-208ENST00000553753 ZKSCAN3Q9BRR0 538 aa12.02□□□□□ -0.49
HNRNPC-208ENST00000553753 KRT23Q9C075 422 aa12.02□□□□□ -0.49
HNRNPC-208ENST00000553753 CNNM2Q9H8M5 875 aa12.02□□□□□ -0.49
HNRNPC-208ENST00000553753 RIPK3Q9Y572 518 aa12.02□□□□□ -0.49
HNRNPC-208ENST00000553753 SLC4A3P48751 1232 aa12.01□□□□□ -0.49
HNRNPC-208ENST00000553753 CCDC178Q5BJE1 867 aa12.01□□□□□ -0.49
HNRNPC-208ENST00000553753 RASGRP2Q7LDG7 609 aa12.01□□□□□ -0.49
HNRNPC-208ENST00000553753 CRISPLD2Q9H0B8 497 aa12.01□□□□□ -0.49
HNRNPC-208ENST00000553753 RAVER2Q9HCJ3 691 aaKnown RBP12.01□□□□□ -0.49
HNRNPC-208ENST00000553753 U3KPZ7 1027 aaPredicted RBP12.01□□□□□ -0.49
HNRNPC-208ENST00000553753 DNAH12Q6ZR08 3092 aa12.01□□□□□ -0.49
HNRNPC-208ENST00000553753 ZNF236Q9UL36 1845 aa12□□□□□ -0.49
HNRNPC-208ENST00000553753 IGHA2P01877 340 aa12□□□□□ -0.49
HNRNPC-208ENST00000553753 CYP21A2P08686 494 aa12□□□□□ -0.49
HNRNPC-208ENST00000553753 CYP2C19P33261 490 aa12□□□□□ -0.49
HNRNPC-208ENST00000553753 CCDC96Q2M329 555 aa12□□□□□ -0.49
HNRNPC-208ENST00000553753 OLFML2BQ68BL8 750 aa12□□□□□ -0.49
HNRNPC-208ENST00000553753 MAP4K1Q92918 833 aa12□□□□□ -0.49
HNRNPC-208ENST00000553753 ZSCAN10Q96SZ4 725 aaPredicted RBP12□□□□□ -0.49
HNRNPC-208ENST00000553753 ZNFX1Q9P2E3 1918 aaKnown RBP12□□□□□ -0.49
HNRNPC-208ENST00000553753 PGK2P07205 417 aa12□□□□□ -0.49
HNRNPC-208ENST00000553753 PDHBP11177 359 aa12□□□□□ -0.49
HNRNPC-208ENST00000553753 CCND3P30281 292 aaPredicted RBP12□□□□□ -0.49
HNRNPC-208ENST00000553753 TRDNQ13061 729 aa12□□□□□ -0.49
HNRNPC-208ENST00000553753 KIAA1211Q6ZU35 1233 aa12□□□□□ -0.49
HNRNPC-208ENST00000553753 UBE2Q1Q7Z7E8 422 aa12□□□□□ -0.49
HNRNPC-208ENST00000553753 MAML3Q96JK9 1138 aa12□□□□□ -0.49
HNRNPC-208ENST00000553753 PRR12Q9ULL5 1215 aa12□□□□□ -0.49
HNRNPC-208ENST00000553753 TTBK2Q6IQ55 1244 aa11.99□□□□□ -0.49
HNRNPC-208ENST00000553753 BTNL9Q6UXG8 535 aa11.99□□□□□ -0.49
HNRNPC-208ENST00000553753 ENAHQ8N8S7 591 aaPredicted RBP11.99□□□□□ -0.49
HNRNPC-208ENST00000553753 CHST13Q8NET6 341 aa11.99□□□□□ -0.49
HNRNPC-208ENST00000553753 ANKS1AQ92625 1134 aa11.99□□□□□ -0.49
HNRNPC-208ENST00000553753 DDX11Q96FC9 970 aa11.99□□□□□ -0.49
HNRNPC-208ENST00000553753 UBAC1Q9BSL1 405 aa11.99□□□□□ -0.49
HNRNPC-208ENST00000553753 FBXO40Q9UH90 709 aa11.99□□□□□ -0.49
HNRNPC-208ENST00000553753 DIS3Q9Y2L1 958 aaKnown RBP11.99□□□□□ -0.49
HNRNPC-208ENST00000553753 ZNF536O15090 1300 aa11.99□□□□□ -0.49
HNRNPC-208ENST00000553753 TNKSO95271 1327 aa11.99□□□□□ -0.49
HNRNPC-208ENST00000553753 FRMPD2Q68DX3 1309 aaPredicted RBP11.99□□□□□ -0.49
HNRNPC-208ENST00000553753 FARP2O94887 1054 aaPredicted RBP11.98□□□□□ -0.49
HNRNPC-208ENST00000553753 SNHG28P0DPA3 235 aa11.98□□□□□ -0.49
HNRNPC-208ENST00000553753 SLC16A2P36021 539 aa11.98□□□□□ -0.49
HNRNPC-208ENST00000553753 ZNF543Q08ER8 600 aa11.98□□□□□ -0.49
HNRNPC-208ENST00000553753 ZNF792Q3KQV3 632 aa11.98□□□□□ -0.49
HNRNPC-208ENST00000553753 LHX8Q68G74 356 aa11.98□□□□□ -0.49
HNRNPC-208ENST00000553753 PNMA1Q8ND90 353 aa11.98□□□□□ -0.49
HNRNPC-208ENST00000553753 AGBL1Q96MI9 1066 aa11.98□□□□□ -0.49
HNRNPC-208ENST00000553753 ESYT1Q9BSJ8 1104 aa11.98□□□□□ -0.49
HNRNPC-208ENST00000553753 KAT14Q9H8E8 782 aa11.98□□□□□ -0.49
HNRNPC-208ENST00000553753 GPCPD1Q9NPB8 672 aa11.98□□□□□ -0.49
HNRNPC-208ENST00000553753 HOMER2Q9NSB8 354 aa11.98□□□□□ -0.49
HNRNPC-208ENST00000553753 OGDHLQ9ULD0 1010 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms