RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 SCRN1Q12765 414 aa21.01■□□□□ 0.95
PSEN1-208ENST00000553719 PABPC4Q13310 644 aaKnown RBP eCLIP21.01■□□□□ 0.95
PSEN1-208ENST00000553719 NTRK3Q16288 839 aa21.01■□□□□ 0.95
PSEN1-208ENST00000553719 FAM160B2Q86V87 743 aa21.01■□□□□ 0.95
PSEN1-208ENST00000553719 GTF3C6Q969F1 213 aa21.01■□□□□ 0.95
PSEN1-208ENST00000553719 SLF1Q9BQI6 1058 aa21.01■□□□□ 0.95
PSEN1-208ENST00000553719 CPVLQ9H3G5 476 aa21.01■□□□□ 0.95
PSEN1-208ENST00000553719 GPCPD1Q9NPB8 672 aa21.01■□□□□ 0.95
PSEN1-208ENST00000553719 KLRF2D3W0D1 207 aa21■□□□□ 0.95
PSEN1-208ENST00000553719 FLOT1O75955 427 aa21■□□□□ 0.95
PSEN1-208ENST00000553719 SMARCA1P28370 1054 aa21■□□□□ 0.95
PSEN1-208ENST00000553719 DSG3P32926 999 aa21■□□□□ 0.95
PSEN1-208ENST00000553719 ZSCAN31Q96LW9 406 aaPredicted RBP21■□□□□ 0.95
PSEN1-208ENST00000553719 SPZ1Q9BXG8 430 aa21■□□□□ 0.95
PSEN1-208ENST00000553719 RIOX1Q9H6W3 641 aa21■□□□□ 0.95
PSEN1-208ENST00000553719 NCOA5Q9HCD5 579 aaKnown RBP21■□□□□ 0.95
PSEN1-208ENST00000553719 CNTNAP5Q8WYK1 1306 aa21■□□□□ 0.95
PSEN1-208ENST00000553719 COL11A1P12107 1806 aaPredicted RBP20.99■□□□□ 0.95
PSEN1-208ENST00000553719 ADD1P35611 737 aaKnown RBP20.99■□□□□ 0.95
PSEN1-208ENST00000553719 SLC16A2P36021 539 aa20.99■□□□□ 0.95
PSEN1-208ENST00000553719 CCT2P78371 535 aaKnown RBP20.99■□□□□ 0.95
PSEN1-208ENST00000553719 STK3Q13188 491 aa20.99■□□□□ 0.95
PSEN1-208ENST00000553719 COG2Q14746 738 aa20.99■□□□□ 0.95
PSEN1-208ENST00000553719 SYDE2Q5VT97 1194 aa20.99■□□□□ 0.95
PSEN1-208ENST00000553719 SRBD1Q8N5C6 995 aaKnown RBP20.99■□□□□ 0.95
PSEN1-208ENST00000553719 PRPF38AQ8NAV1 312 aaKnown RBP20.99■□□□□ 0.95
PSEN1-208ENST00000553719 REPS2Q8NFH8 660 aa20.99■□□□□ 0.95
PSEN1-208ENST00000553719 CHURC1Q8WUH1 139 aa20.99■□□□□ 0.95
PSEN1-208ENST00000553719 MTMR8Q96EF0 704 aa20.99■□□□□ 0.95
PSEN1-208ENST00000553719 TMX3Q96JJ7 454 aa20.99■□□□□ 0.95
PSEN1-208ENST00000553719 P2RX7Q99572 595 aaKnown RBP20.99■□□□□ 0.95
PSEN1-208ENST00000553719 LZTS2Q9BRK4 669 aa20.99■□□□□ 0.95
PSEN1-208ENST00000553719 UBA5Q9GZZ9 404 aa20.99■□□□□ 0.95
PSEN1-208ENST00000553719 SH2B1Q9NRF2 756 aaPredicted RBP20.99■□□□□ 0.95
PSEN1-208ENST00000553719 PNMA3Q9UL41 463 aa20.99■□□□□ 0.95
PSEN1-208ENST00000553719 PRR12Q9ULL5 1215 aa20.99■□□□□ 0.95
PSEN1-208ENST00000553719 NAP1L2Q9ULW6 460 aaPredicted RBP20.99■□□□□ 0.95
PSEN1-208ENST00000553719 CCDC196A0A1B0GTZ2 297 aa20.98■□□□□ 0.95
PSEN1-208ENST00000553719 CYP2C8P10632 490 aa20.98■□□□□ 0.95
PSEN1-208ENST00000553719 GNAQP50148 359 aa20.98■□□□□ 0.95
PSEN1-208ENST00000553719 HERVK_113P62684 666 aa20.98■□□□□ 0.95
PSEN1-208ENST00000553719 IRX3P78415 501 aaPredicted RBP20.98■□□□□ 0.95
PSEN1-208ENST00000553719 ATG4CQ96DT6 458 aa20.98■□□□□ 0.95
PSEN1-208ENST00000553719 PARK7Q99497 189 aaKnown RBP20.98■□□□□ 0.95
PSEN1-208ENST00000553719 CFHR5Q9BXR6 569 aa20.98■□□□□ 0.95
PSEN1-208ENST00000553719 SLKQ9H2G2 1235 aaPredicted RBP20.98■□□□□ 0.95
PSEN1-208ENST00000553719 JMJD4Q9H9V9 463 aa20.98■□□□□ 0.95
PSEN1-208ENST00000553719 CTDNEP1O95476 244 aa20.97■□□□□ 0.95
PSEN1-208ENST00000553719 OSBPP22059 807 aa20.97■□□□□ 0.95
PSEN1-208ENST00000553719 ADGRF4Q8IZF3 695 aa20.97■□□□□ 0.95
PSEN1-208ENST00000553719 CMTR1Q8N1G2 835 aaKnown RBP20.97■□□□□ 0.95
PSEN1-208ENST00000553719 NECAB1Q8N987 351 aa20.97■□□□□ 0.95
PSEN1-208ENST00000553719 RANBP17Q9H2T7 1088 aaKnown RBP20.97■□□□□ 0.95
PSEN1-208ENST00000553719 SLC38A10Q9HBR0 1119 aa20.97■□□□□ 0.95
PSEN1-208ENST00000553719 HOXC10Q9NYD6 342 aa20.97■□□□□ 0.95
PSEN1-208ENST00000553719 BAZ2BQ9UIF8 2168 aaKnown RBP20.97■□□□□ 0.95
PSEN1-208ENST00000553719 VWA5AO00534 786 aa20.96■□□□□ 0.95
PSEN1-208ENST00000553719 CNMDO75829 334 aa20.96■□□□□ 0.95
PSEN1-208ENST00000553719 IFNAR1P17181 557 aa20.96■□□□□ 0.95
PSEN1-208ENST00000553719 OTUD7BQ6GQQ9 843 aa20.96■□□□□ 0.95
PSEN1-208ENST00000553719 KIFC2Q96AC6 838 aa20.96■□□□□ 0.95
PSEN1-208ENST00000553719 TSHZ2Q9NRE2 1034 aa20.96■□□□□ 0.95
PSEN1-208ENST00000553719 ALDH1A1P00352 501 aa20.95■□□□□ 0.94
PSEN1-208ENST00000553719 FDX1P10109 184 aa20.95■□□□□ 0.94
PSEN1-208ENST00000553719 TAF1CQ15572 869 aaPredicted RBP20.95■□□□□ 0.94
PSEN1-208ENST00000553719 GTF3C2Q8WUA4 911 aaPredicted RBP20.95■□□□□ 0.94
PSEN1-208ENST00000553719 ISY1Q9ULR0 285 aaKnown RBP20.95■□□□□ 0.94
PSEN1-208ENST00000553719 ZNF536O15090 1300 aa20.95■□□□□ 0.94
PSEN1-208ENST00000553719 K7ELQ4 463 aaPredicted RBP20.94■□□□□ 0.94
PSEN1-208ENST00000553719 ATP2A1O14983 1001 aa20.94■□□□□ 0.94
PSEN1-208ENST00000553719 CA12O43570 354 aa20.94■□□□□ 0.94
PSEN1-208ENST00000553719 IKQ13123 557 aaPredicted RBP20.94■□□□□ 0.94
PSEN1-208ENST00000553719 CRHR2Q13324 411 aa20.94■□□□□ 0.94
PSEN1-208ENST00000553719 CUL4AQ13619 759 aa20.94■□□□□ 0.94
PSEN1-208ENST00000553719 MB21D1Q8N884 522 aa20.94■□□□□ 0.94
PSEN1-208ENST00000553719 NSUN7Q8NE18 718 aaKnown RBP20.94■□□□□ 0.94
PSEN1-208ENST00000553719 TXNRD2Q9NNW7 524 aa20.94■□□□□ 0.94
PSEN1-208ENST00000553719 RBPJLQ9UBG7 517 aa20.94■□□□□ 0.94
PSEN1-208ENST00000553719 ZNF214Q9UL59 606 aaPredicted RBP20.94■□□□□ 0.94
PSEN1-208ENST00000553719 BCRP11274 1271 aa20.93■□□□□ 0.94
PSEN1-208ENST00000553719 GCLCP48506 637 aaPredicted RBP20.93■□□□□ 0.94
PSEN1-208ENST00000553719 CCDC83Q8IWF9 413 aa20.93■□□□□ 0.94
PSEN1-208ENST00000553719 RNF186Q9NXI6 227 aa20.93■□□□□ 0.94
PSEN1-208ENST00000553719 BTBD7Q9P203 1132 aa20.93■□□□□ 0.94
PSEN1-208ENST00000553719 MORF4L1Q9UBU8 362 aa20.93■□□□□ 0.94
PSEN1-208ENST00000553719 MYH6P13533 1939 aa20.92■□□□□ 0.94
PSEN1-208ENST00000553719 DHX16O60231 1041 aaKnown RBP20.92■□□□□ 0.94
PSEN1-208ENST00000553719 TLR2O60603 784 aa20.92■□□□□ 0.94
PSEN1-208ENST00000553719 PEX10O60683 326 aa20.92■□□□□ 0.94
PSEN1-208ENST00000553719 PPP1R11O60927 126 aaPredicted RBP20.92■□□□□ 0.94
PSEN1-208ENST00000553719 OAZ1P54368 228 aa20.92■□□□□ 0.94
PSEN1-208ENST00000553719 TMEM132BQ14DG7 1078 aa20.92■□□□□ 0.94
PSEN1-208ENST00000553719 CDC37Q16543 378 aaPredicted RBP20.92■□□□□ 0.94
PSEN1-208ENST00000553719 QRICH1Q2TAL8 776 aa20.92■□□□□ 0.94
PSEN1-208ENST00000553719 C17orf99Q6UX52 265 aa20.92■□□□□ 0.94
PSEN1-208ENST00000553719 SMARCC2Q8TAQ2 1214 aa20.92■□□□□ 0.94
PSEN1-208ENST00000553719 SMCR8Q8TEV9 937 aaPredicted RBP20.92■□□□□ 0.94
PSEN1-208ENST00000553719 PHKBQ93100 1093 aa20.92■□□□□ 0.94
PSEN1-208ENST00000553719 PIGSQ96S52 555 aa20.92■□□□□ 0.94
PSEN1-208ENST00000553719 LLPHQ9BRT6 129 aaKnown RBP20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms