RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 MAP4K2Q12851 820 aa5.33□□□□□ -1.56
TDP1-207ENST00000553617 TRIM28Q13263 835 aaKnown RBP5.33□□□□□ -1.56
TDP1-207ENST00000553617 GRB10Q13322 594 aa5.33□□□□□ -1.56
TDP1-207ENST00000553617 SF1Q15637 639 aaKnown RBP5.33□□□□□ -1.56
TDP1-207ENST00000553617 PLA2G4EQ3MJ16 856 aa5.33□□□□□ -1.56
TDP1-207ENST00000553617 CT47A1Q5JQC4 288 aaPredicted RBP5.33□□□□□ -1.56
TDP1-207ENST00000553617 GTF2IRD2BQ6EKJ0 949 aa5.33□□□□□ -1.56
TDP1-207ENST00000553617 CDPF1Q6NVV7 123 aa5.33□□□□□ -1.56
TDP1-207ENST00000553617 SEZ6L2Q6UXD5 910 aa5.33□□□□□ -1.56
TDP1-207ENST00000553617 BRAPQ7Z569 592 aa5.33□□□□□ -1.56
TDP1-207ENST00000553617 FGD2Q7Z6J4 655 aa5.33□□□□□ -1.56
TDP1-207ENST00000553617 STRA8Q7Z7C7 330 aa5.33□□□□□ -1.56
TDP1-207ENST00000553617 CDH24Q86UP0 819 aa5.33□□□□□ -1.56
TDP1-207ENST00000553617 GTF2IRD2Q86UP8 949 aa5.33□□□□□ -1.56
TDP1-207ENST00000553617 PPM1KQ8N3J5 372 aa5.33□□□□□ -1.56
TDP1-207ENST00000553617 ADCY4Q8NFM4 1077 aa5.33□□□□□ -1.56
TDP1-207ENST00000553617 JDP2Q8WYK2 163 aa5.33□□□□□ -1.56
TDP1-207ENST00000553617 SCLYQ96I15 445 aa5.33□□□□□ -1.56
TDP1-207ENST00000553617 DCAF5Q96JK2 942 aa5.33□□□□□ -1.56
TDP1-207ENST00000553617 SEMA6CQ9H3T2 930 aa5.33□□□□□ -1.56
TDP1-207ENST00000553617 FAN1Q9Y2M0 1017 aa5.33□□□□□ -1.56
TDP1-207ENST00000553617 PCDHB12Q9Y5F1 795 aa5.33□□□□□ -1.56
TDP1-207ENST00000553617 CNTNAP5Q8WYK1 1306 aa5.32□□□□□ -1.56
TDP1-207ENST00000553617 WASHC2CQ9Y4E1 1318 aa5.32□□□□□ -1.56
TDP1-207ENST00000553617 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.32□□□□□ -1.56
TDP1-207ENST00000553617 MSTNO14793 375 aa5.32□□□□□ -1.56
TDP1-207ENST00000553617 KCNH1O95259 989 aa5.32□□□□□ -1.56
TDP1-207ENST00000553617 ITGB2P05107 769 aa5.32□□□□□ -1.56
TDP1-207ENST00000553617 RAB6AP20340 208 aa5.32□□□□□ -1.56
TDP1-207ENST00000553617 HOXC12P31275 282 aa5.32□□□□□ -1.56
TDP1-207ENST00000553617 SNW1Q13573 536 aaKnown RBP5.32□□□□□ -1.56
TDP1-207ENST00000553617 HSP90AB2PQ58FF8 381 aa5.32□□□□□ -1.56
TDP1-207ENST00000553617 SLC35F1Q5T1Q4 408 aa5.32□□□□□ -1.56
TDP1-207ENST00000553617 CNNM4Q6P4Q7 775 aa5.32□□□□□ -1.56
TDP1-207ENST00000553617 SHISA2Q6UWI4 295 aa5.32□□□□□ -1.56
TDP1-207ENST00000553617 AHI1Q8N157 1196 aa5.32□□□□□ -1.56
TDP1-207ENST00000553617 KCTD13Q8WZ19 329 aa5.32□□□□□ -1.56
TDP1-207ENST00000553617 PTPRN2Q92932 1015 aa5.32□□□□□ -1.56
TDP1-207ENST00000553617 FAM46AQ96IP4 442 aaKnown RBP5.32□□□□□ -1.56
TDP1-207ENST00000553617 CCDC140Q96MF4 163 aa5.32□□□□□ -1.56
TDP1-207ENST00000553617 CEP89Q96ST8 783 aa5.32□□□□□ -1.56
TDP1-207ENST00000553617 PRDM14Q9GZV8 571 aa5.32□□□□□ -1.56
TDP1-207ENST00000553617 MTFR1LQ9H019 292 aa5.32□□□□□ -1.56
TDP1-207ENST00000553617 PRDM10Q9NQV6 1147 aa5.32□□□□□ -1.56
TDP1-207ENST00000553617 NDOR1Q9UHB4 597 aa5.32□□□□□ -1.56
TDP1-207ENST00000553617 DIS3Q9Y2L1 958 aaKnown RBP5.32□□□□□ -1.56
TDP1-207ENST00000553617 DYNC1LI2O43237 492 aaPredicted RBP5.31□□□□□ -1.56
TDP1-207ENST00000553617 ALX3O95076 343 aa5.31□□□□□ -1.56
TDP1-207ENST00000553617 EOMESO95936 686 aa5.31□□□□□ -1.56
TDP1-207ENST00000553617 ASLP04424 464 aa5.31□□□□□ -1.56
TDP1-207ENST00000553617 ZNF460Q14592 562 aa5.31□□□□□ -1.56
TDP1-207ENST00000553617 SEPT7Q16181 437 aaKnown RBP5.31□□□□□ -1.56
TDP1-207ENST00000553617 PKN3Q6P5Z2 889 aa5.31□□□□□ -1.56
TDP1-207ENST00000553617 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.31□□□□□ -1.56
TDP1-207ENST00000553617 MAMDC2Q7Z304 686 aaPredicted RBP5.31□□□□□ -1.56
TDP1-207ENST00000553617 FIBCD1Q8N539 461 aa5.31□□□□□ -1.56
TDP1-207ENST00000553617 BEND7Q8N7W2 519 aaPredicted RBP5.31□□□□□ -1.56
TDP1-207ENST00000553617 TMEM145Q8NBT3 493 aa5.31□□□□□ -1.56
TDP1-207ENST00000553617 BRF1Q92994 677 aa5.31□□□□□ -1.56
TDP1-207ENST00000553617 SPOCK3Q9BQ16 436 aa5.31□□□□□ -1.56
TDP1-207ENST00000553617 NOL6Q9H6R4 1146 aaKnown RBP5.31□□□□□ -1.56
TDP1-207ENST00000553617 AKTIPQ9H8T0 292 aa5.31□□□□□ -1.56
TDP1-207ENST00000553617 CYP26B1Q9NR63 512 aa5.31□□□□□ -1.56
TDP1-207ENST00000553617 DAGLAQ9Y4D2 1042 aa5.31□□□□□ -1.56
TDP1-207ENST00000553617 TNPO3Q9Y5L0 923 aaKnown RBP5.31□□□□□ -1.56
TDP1-207ENST00000553617 PHLDB1Q86UU1 1377 aa5.3□□□□□ -1.56
TDP1-207ENST00000553617 CNTNAP4Q9C0A0 1308 aa5.3□□□□□ -1.56
TDP1-207ENST00000553617 BLACEA4D250 179 aa5.3□□□□□ -1.56
TDP1-207ENST00000553617 ADAM23O75077 832 aa5.3□□□□□ -1.56
TDP1-207ENST00000553617 NFICP08651 508 aa5.3□□□□□ -1.56
TDP1-207ENST00000553617 PCBP1Q15365 356 aaKnown RBP eCLIP5.3□□□□□ -1.56
TDP1-207ENST00000553617 DHCR24Q15392 516 aa5.3□□□□□ -1.56
TDP1-207ENST00000553617 NOL9Q5SY16 702 aaKnown RBP5.3□□□□□ -1.56
TDP1-207ENST00000553617 DDX46Q7L014 1031 aaKnown RBP5.3□□□□□ -1.56
TDP1-207ENST00000553617 FMNL3Q8IVF7 1028 aa5.3□□□□□ -1.56
TDP1-207ENST00000553617 RAVER1Q8IY67 606 aaKnown RBP5.3□□□□□ -1.56
TDP1-207ENST00000553617 KREMEN2Q8NCW0 462 aa5.3□□□□□ -1.56
TDP1-207ENST00000553617 LENG1Q96BZ8 264 aaPredicted RBP5.3□□□□□ -1.56
TDP1-207ENST00000553617 UBL7Q96S82 380 aaPredicted RBP5.3□□□□□ -1.56
TDP1-207ENST00000553617 CEP41Q9BYV8 373 aa5.3□□□□□ -1.56
TDP1-207ENST00000553617 SLC52A1Q9NWF4 448 aa5.3□□□□□ -1.56
TDP1-207ENST00000553617 GFOD1Q9NXC2 390 aa5.3□□□□□ -1.56
TDP1-207ENST00000553617 FBXL21Q9UKT6 434 aa5.3□□□□□ -1.56
TDP1-207ENST00000553617 MKL2Q9ULH7 1088 aa5.3□□□□□ -1.56
TDP1-207ENST00000553617 EID1Q9Y6B2 187 aa5.3□□□□□ -1.56
TDP1-207ENST00000553617 TCRBV16S1A1N1A0A5B0 115 aa5.29□□□□□ -1.56
TDP1-207ENST00000553617 PIK3R2O00459 728 aa5.29□□□□□ -1.56
TDP1-207ENST00000553617 SIGLEC6O43699 453 aa5.29□□□□□ -1.56
TDP1-207ENST00000553617 GAS2O43903 313 aaKnown RBP5.29□□□□□ -1.56
TDP1-207ENST00000553617 LRRN2O75325 713 aa5.29□□□□□ -1.56
TDP1-207ENST00000553617 CPP00450 1065 aa5.29□□□□□ -1.56
TDP1-207ENST00000553617 PROCP04070 461 aa5.29□□□□□ -1.56
TDP1-207ENST00000553617 SNRPB2P08579 225 aaKnown RBP5.29□□□□□ -1.56
TDP1-207ENST00000553617 IGFALSP35858 605 aa5.29□□□□□ -1.56
TDP1-207ENST00000553617 USP11P51784 963 aa5.29□□□□□ -1.56
TDP1-207ENST00000553617 FAM50AQ14320 339 aaKnown RBP5.29□□□□□ -1.56
TDP1-207ENST00000553617 PPP2R5DQ14738 602 aa5.29□□□□□ -1.56
TDP1-207ENST00000553617 GRIK4Q16099 956 aa5.29□□□□□ -1.56
TDP1-207ENST00000553617 PRSS53Q2L4Q9 553 aa5.29□□□□□ -1.56
TDP1-207ENST00000553617 UVSSAQ2YD98 709 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms