RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 APBA1Q02410 837 aa9.89□□□□□ -0.83
GTF2A1-203ENST00000553612 TMC5Q6UXY8 1006 aa9.89□□□□□ -0.83
GTF2A1-203ENST00000553612 ANKRD42Q8N9B4 389 aa9.89□□□□□ -0.83
GTF2A1-203ENST00000553612 PDZD8Q8NEN9 1154 aa9.89□□□□□ -0.83
GTF2A1-203ENST00000553612 FBXL5Q9UKA1 691 aa9.89□□□□□ -0.83
GTF2A1-203ENST00000553612 GPRASP1Q5JY77 1395 aa9.88□□□□□ -0.83
GTF2A1-203ENST00000553612 PRKAR2BP31323 418 aa9.88□□□□□ -0.83
GTF2A1-203ENST00000553612 RASSF2P50749 326 aa9.88□□□□□ -0.83
GTF2A1-203ENST00000553612 CCR3P51677 355 aa9.88□□□□□ -0.83
GTF2A1-203ENST00000553612 PAK2Q13177 524 aa9.88□□□□□ -0.83
GTF2A1-203ENST00000553612 SLC5A9Q2M3M2 681 aa9.88□□□□□ -0.83
GTF2A1-203ENST00000553612 RNF220Q5VTB9 566 aa9.88□□□□□ -0.83
GTF2A1-203ENST00000553612 LRRC8BQ6P9F7 803 aa9.88□□□□□ -0.83
GTF2A1-203ENST00000553612 HDAC2Q92769 488 aaKnown RBP9.88□□□□□ -0.83
GTF2A1-203ENST00000553612 ECT2Q9H8V3 914 aa9.88□□□□□ -0.83
GTF2A1-203ENST00000553612 ZNF644Q9H582 1327 aaPredicted RBP9.88□□□□□ -0.83
GTF2A1-203ENST00000553612 TARSL2A2RTX5 802 aaKnown RBP9.88□□□□□ -0.83
GTF2A1-203ENST00000553612 CCDC159P0C7I6 412 aa9.88□□□□□ -0.83
GTF2A1-203ENST00000553612 PMS2P54278 862 aa9.88□□□□□ -0.83
GTF2A1-203ENST00000553612 KCNA1Q09470 495 aa9.88□□□□□ -0.83
GTF2A1-203ENST00000553612 EAPPQ56P03 285 aaPredicted RBP9.88□□□□□ -0.83
GTF2A1-203ENST00000553612 C8orf74Q6P047 294 aa9.88□□□□□ -0.83
GTF2A1-203ENST00000553612 LARP1Q6PKG0 1096 aaKnown RBP9.88□□□□□ -0.83
GTF2A1-203ENST00000553612 HEATR4Q86WZ0 1026 aa9.88□□□□□ -0.83
GTF2A1-203ENST00000553612 CORO1CQ9ULV4 474 aaPredicted RBP9.88□□□□□ -0.83
GTF2A1-203ENST00000553612 PPME1Q9Y570 386 aa9.88□□□□□ -0.83
GTF2A1-203ENST00000553612 ERICH3Q5RHP9 1530 aa9.88□□□□□ -0.83
GTF2A1-203ENST00000553612 RTL1A6NKG5 1358 aa9.88□□□□□ -0.83
GTF2A1-203ENST00000553612 TSGA10IPQ3SY00 556 aa9.88□□□□□ -0.83
GTF2A1-203ENST00000553612 NAF1Q96HR8 494 aaKnown RBP9.88□□□□□ -0.83
GTF2A1-203ENST00000553612 CCDC68Q9H2F9 335 aa9.88□□□□□ -0.83
GTF2A1-203ENST00000553612 IMPACTQ9P2X3 320 aa9.88□□□□□ -0.83
GTF2A1-203ENST00000553612 SEC63Q9UGP8 760 aaKnown RBP9.88□□□□□ -0.83
GTF2A1-203ENST00000553612 ZCCHC8Q6NZY4 707 aaKnown RBP9.88□□□□□ -0.83
GTF2A1-203ENST00000553612 VPS52Q8N1B4 723 aa9.88□□□□□ -0.83
GTF2A1-203ENST00000553612 ZBTB8BQ8NAP8 495 aaPredicted RBP9.88□□□□□ -0.83
GTF2A1-203ENST00000553612 CCT8L2Q96SF2 557 aa9.88□□□□□ -0.83
GTF2A1-203ENST00000553612 ELAC2Q9BQ52 826 aaKnown RBP9.88□□□□□ -0.83
GTF2A1-203ENST00000553612 NUF2Q9BZD4 464 aa9.88□□□□□ -0.83
GTF2A1-203ENST00000553612 CDC23Q9UJX2 597 aa9.88□□□□□ -0.83
GTF2A1-203ENST00000553612 MYCP01106 439 aaPredicted RBP9.88□□□□□ -0.83
GTF2A1-203ENST00000553612 PMS1P54277 932 aaKnown RBP9.88□□□□□ -0.83
GTF2A1-203ENST00000553612 C11orf57Q6ZUT1 292 aaPredicted RBP9.88□□□□□ -0.83
GTF2A1-203ENST00000553612 TSPYL4Q9UJ04 414 aa9.88□□□□□ -0.83
GTF2A1-203ENST00000553612 SEMA3DO95025 777 aa9.87□□□□□ -0.83
GTF2A1-203ENST00000553612 MAP3K12Q12852 859 aa9.87□□□□□ -0.83
GTF2A1-203ENST00000553612 CWF19L2Q2TBE0 894 aaKnown RBP9.87□□□□□ -0.83
GTF2A1-203ENST00000553612 TMEM53Q6P2H8 277 aa9.87□□□□□ -0.83
GTF2A1-203ENST00000553612 RFX8Q6ZV50 586 aa9.87□□□□□ -0.83
GTF2A1-203ENST00000553612 CLSTN2Q9H4D0 955 aa9.87□□□□□ -0.83
GTF2A1-203ENST00000553612 NPC1L1Q9UHC9 1359 aa9.87□□□□□ -0.83
GTF2A1-203ENST00000553612 ARHGAP6O43182 974 aa9.87□□□□□ -0.83
GTF2A1-203ENST00000553612 GNAI2P04899 355 aa9.87□□□□□ -0.83
GTF2A1-203ENST00000553612 TUBA1BP68363 451 aa9.87□□□□□ -0.83
GTF2A1-203ENST00000553612 C2orf54Q08AI8 447 aa9.87□□□□□ -0.83
GTF2A1-203ENST00000553612 TMTC4Q5T4D3 741 aa9.87□□□□□ -0.83
GTF2A1-203ENST00000553612 TUBA1AQ71U36 451 aa9.87□□□□□ -0.83
GTF2A1-203ENST00000553612 TBC1D5Q92609 795 aa9.87□□□□□ -0.83
GTF2A1-203ENST00000553612 CFAP57Q96MR6 1250 aa9.87□□□□□ -0.83
GTF2A1-203ENST00000553612 PCDHGC5Q9Y5F6 944 aa9.87□□□□□ -0.83
GTF2A1-203ENST00000553612 YY1P25490 414 aa9.87□□□□□ -0.83
GTF2A1-203ENST00000553612 PDE1BQ01064 536 aa9.87□□□□□ -0.83
GTF2A1-203ENST00000553612 HDGFL2Q7Z4V5 671 aaPredicted RBP9.87□□□□□ -0.83
GTF2A1-203ENST00000553612 SLC35F6Q8N357 371 aa9.87□□□□□ -0.83
GTF2A1-203ENST00000553612 SLC17A8Q8NDX2 589 aa9.87□□□□□ -0.83
GTF2A1-203ENST00000553612 RSPH1Q8WYR4 309 aa9.87□□□□□ -0.83
GTF2A1-203ENST00000553612 TBATAQ96M53 351 aa9.87□□□□□ -0.83
GTF2A1-203ENST00000553612 BOLA2Q9H3K6 86 aa9.87□□□□□ -0.83
GTF2A1-203ENST00000553612 DDX56Q9NY93 547 aaKnown RBP9.87□□□□□ -0.83
GTF2A1-203ENST00000553612 PHF8Q9UPP1 1060 aa9.87□□□□□ -0.83
GTF2A1-203ENST00000553612 EFR3BQ9Y2G0 817 aa9.87□□□□□ -0.83
GTF2A1-203ENST00000553612 ZSCAN9O15535 394 aaPredicted RBP9.87□□□□□ -0.83
GTF2A1-203ENST00000553612 SERPINI2O75830 405 aa9.87□□□□□ -0.83
GTF2A1-203ENST00000553612 HNRNPMP52272 730 aaKnown RBP eCLIP9.87□□□□□ -0.83
GTF2A1-203ENST00000553612 IFI16Q16666 785 aaKnown RBP9.87□□□□□ -0.83
GTF2A1-203ENST00000553612 KRT71Q3SY84 523 aa9.87□□□□□ -0.83
GTF2A1-203ENST00000553612 BEND3Q5T5X7 828 aa9.87□□□□□ -0.83
GTF2A1-203ENST00000553612 NAA35Q5VZE5 725 aa9.87□□□□□ -0.83
GTF2A1-203ENST00000553612 PHLDB3Q6NSJ2 640 aa9.87□□□□□ -0.83
GTF2A1-203ENST00000553612 ELMSAN1Q6PJG2 1045 aa9.87□□□□□ -0.83
GTF2A1-203ENST00000553612 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.87□□□□□ -0.83
GTF2A1-203ENST00000553612 KLHL25Q9H0H3 589 aa9.87□□□□□ -0.83
GTF2A1-203ENST00000553612 IFT122Q9HBG6 1241 aa9.87□□□□□ -0.83
GTF2A1-203ENST00000553612 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.87□□□□□ -0.83
GTF2A1-203ENST00000553612 FANCLQ9NW38 375 aa9.87□□□□□ -0.83
GTF2A1-203ENST00000553612 CARMIL1Q5VZK9 1371 aa9.87□□□□□ -0.83
GTF2A1-203ENST00000553612 DPPA5A6NC42 116 aa9.87□□□□□ -0.83
GTF2A1-203ENST00000553612 AP5Z1O43299 807 aa9.87□□□□□ -0.83
GTF2A1-203ENST00000553612 BIRC3Q13489 604 aa9.87□□□□□ -0.83
GTF2A1-203ENST00000553612 CCDC93Q567U6 631 aa9.87□□□□□ -0.83
GTF2A1-203ENST00000553612 CEP78Q5JTW2 689 aa9.87□□□□□ -0.83
GTF2A1-203ENST00000553612 ZNF449Q6P9G9 518 aa9.87□□□□□ -0.83
GTF2A1-203ENST00000553612 RUFY4Q6ZNE9 571 aa9.87□□□□□ -0.83
GTF2A1-203ENST00000553612 AACSQ86V21 672 aa9.87□□□□□ -0.83
GTF2A1-203ENST00000553612 ANGPTL3Q9Y5C1 460 aa9.87□□□□□ -0.83
GTF2A1-203ENST00000553612 GALK1P51570 392 aa9.86□□□□□ -0.83
GTF2A1-203ENST00000553612 KIFAP3Q92845 792 aa9.86□□□□□ -0.83
GTF2A1-203ENST00000553612 SH3GL2Q99962 352 aa9.86□□□□□ -0.83
GTF2A1-203ENST00000553612 KIF21BO75037 1637 aa9.86□□□□□ -0.83
GTF2A1-203ENST00000553612 TEX28O15482 410 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms