RNA–Protein interactions for RNA: ENST00000553599.5

PSEN1-207, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-207ENST00000553599 ZIC5Q96T25 663 aa22.49■■□□□ 1.19
PSEN1-207ENST00000553599 PARK7Q99497 189 aaKnown RBP22.49■■□□□ 1.19
PSEN1-207ENST00000553599 LARP6Q9BRS8 491 aaKnown RBP22.49■■□□□ 1.19
PSEN1-207ENST00000553599 ASCC2Q9H1I8 757 aaPredicted RBP22.49■■□□□ 1.19
PSEN1-207ENST00000553599 GPCPD1Q9NPB8 672 aa22.49■■□□□ 1.19
PSEN1-207ENST00000553599 DSG3P32926 999 aa22.48■■□□□ 1.19
PSEN1-207ENST00000553599 CCDC144CPQ8IYA2 1237 aa22.48■■□□□ 1.19
PSEN1-207ENST00000553599 STAG2Q8N3U4 1231 aa22.48■■□□□ 1.19
PSEN1-207ENST00000553599 GTF3C6Q969F1 213 aa22.48■■□□□ 1.19
PSEN1-207ENST00000553599 SPZ1Q9BXG8 430 aa22.48■■□□□ 1.19
PSEN1-207ENST00000553599 FAM217BQ9NTX9 383 aaPredicted RBP22.48■■□□□ 1.19
PSEN1-207ENST00000553599 ADAMTS5Q9UNA0 930 aa22.48■■□□□ 1.19
PSEN1-207ENST00000553599 CD2BP2O95400 341 aaKnown RBP22.47■■□□□ 1.19
PSEN1-207ENST00000553599 SYDE2Q5VT97 1194 aa22.47■■□□□ 1.19
PSEN1-207ENST00000553599 RAB11FIP4Q86YS3 637 aa22.47■■□□□ 1.19
PSEN1-207ENST00000553599 MB21D1Q8N884 522 aa22.47■■□□□ 1.19
PSEN1-207ENST00000553599 RIOX1Q9H6W3 641 aa22.47■■□□□ 1.19
PSEN1-207ENST00000553599 CPLX1O14810 134 aa22.46■■□□□ 1.19
PSEN1-207ENST00000553599 CDKL5O76039 1030 aa22.46■■□□□ 1.19
PSEN1-207ENST00000553599 CDC27P30260 824 aa22.46■■□□□ 1.19
PSEN1-207ENST00000553599 GCLCP48506 637 aaPredicted RBP22.46■■□□□ 1.19
PSEN1-207ENST00000553599 CCT2P78371 535 aaKnown RBP22.46■■□□□ 1.19
PSEN1-207ENST00000553599 STK3Q13188 491 aa22.46■■□□□ 1.19
PSEN1-207ENST00000553599 TTBK2Q6IQ55 1244 aa22.46■■□□□ 1.19
PSEN1-207ENST00000553599 P2RX7Q99572 595 aaKnown RBP22.46■■□□□ 1.19
PSEN1-207ENST00000553599 FBXO28Q9NVF7 368 aa22.46■■□□□ 1.19
PSEN1-207ENST00000553599 RBM27Q9P2N5 1060 aaKnown RBP22.46■■□□□ 1.19
PSEN1-207ENST00000553599 PNMA2Q9UL42 364 aa22.46■■□□□ 1.19
PSEN1-207ENST00000553599 PRR12Q9ULL5 1215 aa22.46■■□□□ 1.19
PSEN1-207ENST00000553599 PARP14Q460N5 1801 aa22.45■■□□□ 1.19
PSEN1-207ENST00000553599 SPDYE16A6NNV3 312 aaPredicted RBP22.45■■□□□ 1.18
PSEN1-207ENST00000553599 IFNAR1P17181 557 aa22.45■■□□□ 1.18
PSEN1-207ENST00000553599 ADD1P35611 737 aaKnown RBP22.45■■□□□ 1.18
PSEN1-207ENST00000553599 HERVK_113P62684 666 aa22.45■■□□□ 1.18
PSEN1-207ENST00000553599 SCRN1Q12765 414 aa22.45■■□□□ 1.18
PSEN1-207ENST00000553599 HSCBQ8IWL3 235 aa22.45■■□□□ 1.18
PSEN1-207ENST00000553599 SMCR8Q8TEV9 937 aaPredicted RBP22.45■■□□□ 1.18
PSEN1-207ENST00000553599 KIFC2Q96AC6 838 aa22.45■■□□□ 1.18
PSEN1-207ENST00000553599 TMX3Q96JJ7 454 aa22.45■■□□□ 1.18
PSEN1-207ENST00000553599 RLFQ13129 1914 aa22.45■■□□□ 1.18
PSEN1-207ENST00000553599 VWA5AO00534 786 aa22.44■■□□□ 1.18
PSEN1-207ENST00000553599 CA12O43570 354 aa22.44■■□□□ 1.18
PSEN1-207ENST00000553599 ZBED4O75132 1171 aa22.44■■□□□ 1.18
PSEN1-207ENST00000553599 PLEKHA8P1O95397 391 aa22.44■■□□□ 1.18
PSEN1-207ENST00000553599 LARGE1O95461 756 aa22.44■■□□□ 1.18
PSEN1-207ENST00000553599 SLC16A2P36021 539 aa22.44■■□□□ 1.18
PSEN1-207ENST00000553599 TAF1CQ15572 869 aaPredicted RBP22.44■■□□□ 1.18
PSEN1-207ENST00000553599 ADGRF4Q8IZF3 695 aa22.44■■□□□ 1.18
PSEN1-207ENST00000553599 SRBD1Q8N5C6 995 aaKnown RBP22.44■■□□□ 1.18
PSEN1-207ENST00000553599 DNAJC5GQ8N7S2 189 aa22.44■■□□□ 1.18
PSEN1-207ENST00000553599 CFHR5Q9BXR6 569 aa22.44■■□□□ 1.18
PSEN1-207ENST00000553599 UBA5Q9GZZ9 404 aa22.44■■□□□ 1.18
PSEN1-207ENST00000553599 SLC38A10Q9HBR0 1119 aa22.44■■□□□ 1.18
PSEN1-207ENST00000553599 ZFYVE28Q9HCC9 887 aa22.44■■□□□ 1.18
PSEN1-207ENST00000553599 NCOA5Q9HCD5 579 aaKnown RBP22.44■■□□□ 1.18
PSEN1-207ENST00000553599 K7ELQ4 463 aaPredicted RBP22.43■■□□□ 1.18
PSEN1-207ENST00000553599 OAZ1P54368 228 aa22.43■■□□□ 1.18
PSEN1-207ENST00000553599 MAP2K1Q02750 393 aaPredicted RBP22.43■■□□□ 1.18
PSEN1-207ENST00000553599 FUT2Q10981 343 aa22.43■■□□□ 1.18
PSEN1-207ENST00000553599 TRAF1Q13077 416 aa22.43■■□□□ 1.18
PSEN1-207ENST00000553599 NTRK3Q16288 839 aa22.43■■□□□ 1.18
PSEN1-207ENST00000553599 ATG4CQ96DT6 458 aa22.43■■□□□ 1.18
PSEN1-207ENST00000553599 MTMR8Q96EF0 704 aa22.43■■□□□ 1.18
PSEN1-207ENST00000553599 LLPHQ9BRT6 129 aaKnown RBP22.43■■□□□ 1.18
PSEN1-207ENST00000553599 RANBP17Q9H2T7 1088 aaKnown RBP22.43■■□□□ 1.18
PSEN1-207ENST00000553599 JMJD4Q9H9V9 463 aa22.43■■□□□ 1.18
PSEN1-207ENST00000553599 RABGAP1Q9Y3P9 1069 aa22.43■■□□□ 1.18
PSEN1-207ENST00000553599 CTDP1Q9Y5B0 961 aaPredicted RBP22.43■■□□□ 1.18
PSEN1-207ENST00000553599 ATP2A1O14983 1001 aa22.42■■□□□ 1.18
PSEN1-207ENST00000553599 CYP2C8P10632 490 aa22.42■■□□□ 1.18
PSEN1-207ENST00000553599 TRIM22Q8IYM9 498 aa22.42■■□□□ 1.18
PSEN1-207ENST00000553599 NECAB1Q8N987 351 aa22.42■■□□□ 1.18
PSEN1-207ENST00000553599 RRP36Q96EU6 259 aaKnown RBP22.42■■□□□ 1.18
PSEN1-207ENST00000553599 RNF26Q9BY78 433 aaPredicted RBP22.42■■□□□ 1.18
PSEN1-207ENST00000553599 SAGE1Q9NXZ1 904 aa22.42■■□□□ 1.18
PSEN1-207ENST00000553599 CNTNAP5Q8WYK1 1306 aa22.41■■□□□ 1.18
PSEN1-207ENST00000553599 A0A0G2JMZ2 1700 aa22.41■■□□□ 1.18
PSEN1-207ENST00000553599 CYTH3O43739 400 aa22.41■■□□□ 1.18
PSEN1-207ENST00000553599 NBPF11Q86T75 865 aa22.41■■□□□ 1.18
PSEN1-207ENST00000553599 SEC63Q9UGP8 760 aaKnown RBP22.41■■□□□ 1.18
PSEN1-207ENST00000553599 ADGRA2Q96PE1 1338 aa22.4■■□□□ 1.18
PSEN1-207ENST00000553599 ZBTB5O15062 677 aa22.4■■□□□ 1.18
PSEN1-207ENST00000553599 PRPF3O43395 683 aaKnown RBP22.4■■□□□ 1.18
PSEN1-207ENST00000553599 TLR2O60603 784 aa22.4■■□□□ 1.18
PSEN1-207ENST00000553599 AKAP17AQ02040 695 aaKnown RBP22.4■■□□□ 1.18
PSEN1-207ENST00000553599 BECN1Q14457 450 aa22.4■■□□□ 1.18
PSEN1-207ENST00000553599 CDC37Q16543 378 aaPredicted RBP22.4■■□□□ 1.18
PSEN1-207ENST00000553599 SLC35G1Q2M3R5 365 aa22.4■■□□□ 1.18
PSEN1-207ENST00000553599 SAMD1Q6SPF0 538 aaPredicted RBP22.4■■□□□ 1.18
PSEN1-207ENST00000553599 CCDC83Q8IWF9 413 aa22.4■■□□□ 1.18
PSEN1-207ENST00000553599 CPVLQ9H3G5 476 aa22.4■■□□□ 1.18
PSEN1-207ENST00000553599 VAT1LQ9HCJ6 419 aa22.4■■□□□ 1.18
PSEN1-207ENST00000553599 MORF4L1Q9UBU8 362 aa22.4■■□□□ 1.18
PSEN1-207ENST00000553599 STK36Q9NRP7 1315 aa22.39■■□□□ 1.18
PSEN1-207ENST00000553599 PNMA6FA0A0J9YX94 578 aa22.39■■□□□ 1.17
PSEN1-207ENST00000553599 FMNL1O95466 1100 aaPredicted RBP22.39■■□□□ 1.17
PSEN1-207ENST00000553599 SSRP1Q08945 709 aaKnown RBP22.39■■□□□ 1.17
PSEN1-207ENST00000553599 CRHR2Q13324 411 aa22.39■■□□□ 1.17
PSEN1-207ENST00000553599 CUL4AQ13619 759 aa22.39■■□□□ 1.17
PSEN1-207ENST00000553599 CMTR1Q8N1G2 835 aaKnown RBP22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms