RNA–Protein interactions for RNA: ENST00000553576.5

VIPAS39-204, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-204ENST00000553576 SNW1Q13573 536 aaKnown RBP6.97□□□□□ -1.29
VIPAS39-204ENST00000553576 SLC39A14Q15043 492 aa6.97□□□□□ -1.29
VIPAS39-204ENST00000553576 CCDC178Q5BJE1 867 aa6.97□□□□□ -1.29
VIPAS39-204ENST00000553576 MYSM1Q5VVJ2 828 aa6.97□□□□□ -1.29
VIPAS39-204ENST00000553576 KRT40Q6A162 431 aa6.97□□□□□ -1.29
VIPAS39-204ENST00000553576 NFXL1Q6ZNB6 911 aa6.97□□□□□ -1.29
VIPAS39-204ENST00000553576 NBPF11Q86T75 865 aa6.97□□□□□ -1.29
VIPAS39-204ENST00000553576 ZNF654Q8IZM8 581 aa6.97□□□□□ -1.29
VIPAS39-204ENST00000553576 CRACR2BQ8N4Y2 399 aaPredicted RBP6.97□□□□□ -1.29
VIPAS39-204ENST00000553576 NAV1Q8NEY1 1877 aa6.97□□□□□ -1.29
VIPAS39-204ENST00000553576 KCNG4Q8TDN1 519 aa6.97□□□□□ -1.29
VIPAS39-204ENST00000553576 SDR42E1Q8WUS8 393 aa6.97□□□□□ -1.29
VIPAS39-204ENST00000553576 MAP3K14Q99558 947 aa6.97□□□□□ -1.29
VIPAS39-204ENST00000553576 ALG1Q9BT22 464 aa6.97□□□□□ -1.29
VIPAS39-204ENST00000553576 CD209Q9NNX6 404 aa6.97□□□□□ -1.29
VIPAS39-204ENST00000553576 TCP11L1Q9NUJ3 509 aa6.97□□□□□ -1.29
VIPAS39-204ENST00000553576 DACT1Q9NYF0 836 aa6.97□□□□□ -1.29
VIPAS39-204ENST00000553576 TFCP2L1Q9NZI6 479 aa6.97□□□□□ -1.29
VIPAS39-204ENST00000553576 ANKIB1Q9P2G1 1089 aa6.97□□□□□ -1.29
VIPAS39-204ENST00000553576 ARPP21Q9UBL0 812 aaPredicted RBP6.97□□□□□ -1.29
VIPAS39-204ENST00000553576 SUGT1Q9Y2Z0 365 aa6.97□□□□□ -1.29
VIPAS39-204ENST00000553576 MYH8P13535 1937 aa6.97□□□□□ -1.29
VIPAS39-204ENST00000553576 FAM205AQ6ZU69 1335 aa6.97□□□□□ -1.29
VIPAS39-204ENST00000553576 GPR75-ASB3A0A0A6YYF3 556 aa6.96□□□□□ -1.3
VIPAS39-204ENST00000553576 FAM237AA0A1B0GTK4 181 aa6.96□□□□□ -1.3
VIPAS39-204ENST00000553576 MINDY4BA8MYZ0 360 aa6.96□□□□□ -1.3
VIPAS39-204ENST00000553576 USP17L12C9JPN9 530 aa6.96□□□□□ -1.3
VIPAS39-204ENST00000553576 USP17L21D6R901 530 aa6.96□□□□□ -1.3
VIPAS39-204ENST00000553576 NPHP1O15259 732 aa6.96□□□□□ -1.3
VIPAS39-204ENST00000553576 PRPF3O43395 683 aaKnown RBP6.96□□□□□ -1.3
VIPAS39-204ENST00000553576 DDAH1O94760 285 aa6.96□□□□□ -1.3
VIPAS39-204ENST00000553576 DEXIO95424 95 aa6.96□□□□□ -1.3
VIPAS39-204ENST00000553576 BAG3O95817 575 aa6.96□□□□□ -1.3
VIPAS39-204ENST00000553576 LDHBP07195 334 aaKnown RBP6.96□□□□□ -1.3
VIPAS39-204ENST00000553576 PRDX5P30044 214 aa6.96□□□□□ -1.3
VIPAS39-204ENST00000553576 GPSM2P81274 684 aa6.96□□□□□ -1.3
VIPAS39-204ENST00000553576 FAM160A1Q05DH4 1040 aa6.96□□□□□ -1.3
VIPAS39-204ENST00000553576 PDE4BQ07343 736 aa6.96□□□□□ -1.3
VIPAS39-204ENST00000553576 DDR1Q08345 913 aa6.96□□□□□ -1.3
VIPAS39-204ENST00000553576 TROAPQ12815 778 aa6.96□□□□□ -1.3
VIPAS39-204ENST00000553576 RTN1Q16799 776 aa6.96□□□□□ -1.3
VIPAS39-204ENST00000553576 C12orf60Q5U649 245 aa6.96□□□□□ -1.3
VIPAS39-204ENST00000553576 LYPD8Q6UX82 237 aa6.96□□□□□ -1.3
VIPAS39-204ENST00000553576 IQCA1Q86XH1 822 aa6.96□□□□□ -1.3
VIPAS39-204ENST00000553576 CCAR1Q8IX12 1150 aaKnown RBP6.96□□□□□ -1.3
VIPAS39-204ENST00000553576 ELOA2Q8IYF1 753 aaPredicted RBP6.96□□□□□ -1.3
VIPAS39-204ENST00000553576 TBC1D22AQ8WUA7 517 aa6.96□□□□□ -1.3
VIPAS39-204ENST00000553576 TRIM44Q96DX7 344 aaPredicted RBP6.96□□□□□ -1.3
VIPAS39-204ENST00000553576 ZSCAN10Q96SZ4 725 aaPredicted RBP6.96□□□□□ -1.3
VIPAS39-204ENST00000553576 UBAC1Q9BSL1 405 aa6.96□□□□□ -1.3
VIPAS39-204ENST00000553576 RNF26Q9BY78 433 aaPredicted RBP6.96□□□□□ -1.3
VIPAS39-204ENST00000553576 TNMDQ9H2S6 317 aa6.96□□□□□ -1.3
VIPAS39-204ENST00000553576 FOXP1Q9H334 677 aaPredicted RBP6.96□□□□□ -1.3
VIPAS39-204ENST00000553576 RBM28Q9NW13 759 aaKnown RBP6.96□□□□□ -1.3
VIPAS39-204ENST00000553576 MAP10Q9P2G4 905 aa6.96□□□□□ -1.3
VIPAS39-204ENST00000553576 GGA1Q9UJY5 639 aa6.96□□□□□ -1.3
VIPAS39-204ENST00000553576 PCDHA7Q9UN72 937 aa6.96□□□□□ -1.3
VIPAS39-204ENST00000553576 DDX60LQ5H9U9 1706 aaKnown RBP6.96□□□□□ -1.3
VIPAS39-204ENST00000553576 ROBO3Q96MS0 1386 aa6.95□□□□□ -1.3
VIPAS39-204ENST00000553576 BAZ2BQ9UIF8 2168 aaKnown RBP6.95□□□□□ -1.3
VIPAS39-204ENST00000553576 ESPNB1AK53 854 aa6.95□□□□□ -1.3
VIPAS39-204ENST00000553576 KIF28PB7ZC32 967 aa6.95□□□□□ -1.3
VIPAS39-204ENST00000553576 SPTLC2O15270 562 aa6.95□□□□□ -1.3
VIPAS39-204ENST00000553576 F12P00748 615 aaPredicted RBP6.95□□□□□ -1.3
VIPAS39-204ENST00000553576 FSHRP23945 695 aa6.95□□□□□ -1.3
VIPAS39-204ENST00000553576 CMA1P23946 247 aa6.95□□□□□ -1.3
VIPAS39-204ENST00000553576 ALDH1B1P30837 517 aa6.95□□□□□ -1.3
VIPAS39-204ENST00000553576 GUCY1B3Q02153 619 aa6.95□□□□□ -1.3
VIPAS39-204ENST00000553576 AGERQ15109 404 aa6.95□□□□□ -1.3
VIPAS39-204ENST00000553576 PTPAQ15257 358 aa6.95□□□□□ -1.3
VIPAS39-204ENST00000553576 AXDND1Q5T1B0 1012 aaPredicted RBP6.95□□□□□ -1.3
VIPAS39-204ENST00000553576 ANO1Q5XXA6 986 aa6.95□□□□□ -1.3
VIPAS39-204ENST00000553576 OTUD7BQ6GQQ9 843 aa6.95□□□□□ -1.3
VIPAS39-204ENST00000553576 MICU3Q86XE3 530 aa6.95□□□□□ -1.3
VIPAS39-204ENST00000553576 DGKHQ86XP1 1220 aa6.95□□□□□ -1.3
VIPAS39-204ENST00000553576 DZIP1Q86YF9 867 aaKnown RBP6.95□□□□□ -1.3
VIPAS39-204ENST00000553576 TRIM22Q8IYM9 498 aa6.95□□□□□ -1.3
VIPAS39-204ENST00000553576 FMR1NBQ8N0W7 255 aaPredicted RBP6.95□□□□□ -1.3
VIPAS39-204ENST00000553576 FAM177A1Q8N128 213 aaPredicted RBP6.95□□□□□ -1.3
VIPAS39-204ENST00000553576 ENAHQ8N8S7 591 aaPredicted RBP6.95□□□□□ -1.3
VIPAS39-204ENST00000553576 TBC1D16Q8TBP0 767 aa6.95□□□□□ -1.3
VIPAS39-204ENST00000553576 TIGD1Q96MW7 591 aa6.95□□□□□ -1.3
VIPAS39-204ENST00000553576 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.95□□□□□ -1.3
VIPAS39-204ENST00000553576 MRIQ9BWK5 157 aa6.95□□□□□ -1.3
VIPAS39-204ENST00000553576 AATFQ9NY61 560 aaKnown RBP eCLIP6.95□□□□□ -1.3
VIPAS39-204ENST00000553576 POLLQ9UGP5 575 aa6.95□□□□□ -1.3
VIPAS39-204ENST00000553576 NOL7Q9UMY1 257 aaKnown RBP6.95□□□□□ -1.3
VIPAS39-204ENST00000553576 ATP6V0A2Q9Y487 856 aa6.95□□□□□ -1.3
VIPAS39-204ENST00000553576 CLIC4Q9Y696 253 aa6.95□□□□□ -1.3
VIPAS39-204ENST00000553576 TNS1Q9HBL0 1735 aaKnown RBP6.95□□□□□ -1.3
VIPAS39-204ENST00000553576 TNKSO95271 1327 aa6.95□□□□□ -1.3
VIPAS39-204ENST00000553576 SLC35F4A4IF30 521 aa6.94□□□□□ -1.3
VIPAS39-204ENST00000553576 FIGNL2A6NMB9 653 aa6.94□□□□□ -1.3
VIPAS39-204ENST00000553576 MSTNO14793 375 aa6.94□□□□□ -1.3
VIPAS39-204ENST00000553576 MMP1P03956 469 aa6.94□□□□□ -1.3
VIPAS39-204ENST00000553576 POLR3DP05423 398 aaPredicted RBP6.94□□□□□ -1.3
VIPAS39-204ENST00000553576 SRGNP10124 158 aa6.94□□□□□ -1.3
VIPAS39-204ENST00000553576 NPR1P16066 1061 aa6.94□□□□□ -1.3
VIPAS39-204ENST00000553576 PDE6BP35913 854 aa6.94□□□□□ -1.3
VIPAS39-204ENST00000553576 TYRO3Q06418 890 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms