RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 ALX1Q15699 326 aa21.62■■□□□ 1.05
SHMT2-206ENST00000553529 SNRNP48Q6IEG0 339 aaKnown RBP21.62■■□□□ 1.05
SHMT2-206ENST00000553529 MMP19Q99542 508 aa21.62■■□□□ 1.05
SHMT2-206ENST00000553529 LAMA4Q16363 1823 aa21.62■■□□□ 1.05
SHMT2-206ENST00000553529 SLC3A2P08195 630 aaKnown RBP21.61■■□□□ 1.05
SHMT2-206ENST00000553529 GMCL1P1Q8NEA9 526 aa21.61■■□□□ 1.05
SHMT2-206ENST00000553529 LENG1Q96BZ8 264 aaPredicted RBP21.61■■□□□ 1.05
SHMT2-206ENST00000553529 MAML3Q96JK9 1138 aa21.61■■□□□ 1.05
SHMT2-206ENST00000553529 MROH8Q9H579 483 aa21.61■■□□□ 1.05
SHMT2-206ENST00000553529 DDX49Q9Y6V7 483 aaKnown RBP21.61■■□□□ 1.05
SHMT2-206ENST00000553529 TMEM232C9JQI7 657 aa21.6■■□□□ 1.05
SHMT2-206ENST00000553529 FGRP09769 529 aa21.6■■□□□ 1.05
SHMT2-206ENST00000553529 MFSD14CQ5VZR4 134 aa21.6■■□□□ 1.05
SHMT2-206ENST00000553529 TTBK2Q6IQ55 1244 aa21.6■■□□□ 1.05
SHMT2-206ENST00000553529 CHRDL2Q6WN34 429 aa21.6■■□□□ 1.05
SHMT2-206ENST00000553529 ZKSCAN3Q9BRR0 538 aa21.6■■□□□ 1.05
SHMT2-206ENST00000553529 ZNF287Q9HBT7 754 aa21.6■■□□□ 1.05
SHMT2-206ENST00000553529 ORC4O43929 436 aa21.59■■□□□ 1.05
SHMT2-206ENST00000553529 FCER1AP12319 257 aa21.59■■□□□ 1.05
SHMT2-206ENST00000553529 BMP3P12645 472 aa21.59■■□□□ 1.05
SHMT2-206ENST00000553529 TTC22Q5TAA0 569 aa21.59■■□□□ 1.05
SHMT2-206ENST00000553529 TRMT44Q8IYL2 757 aaKnown RBP21.59■■□□□ 1.05
SHMT2-206ENST00000553529 C7orf61Q8IZ16 206 aa21.59■■□□□ 1.05
SHMT2-206ENST00000553529 C11orf49Q9H6J7 331 aa21.59■■□□□ 1.05
SHMT2-206ENST00000553529 HOMER2Q9NSB8 354 aa21.59■■□□□ 1.05
SHMT2-206ENST00000553529 FRMPD2Q68DX3 1309 aaPredicted RBP21.58■■□□□ 1.05
SHMT2-206ENST00000553529 ZNF792Q3KQV3 632 aa21.58■■□□□ 1.05
SHMT2-206ENST00000553529 HABP4Q5JVS0 413 aaKnown RBP21.58■■□□□ 1.05
SHMT2-206ENST00000553529 NECAB2Q7Z6G3 386 aa21.58■■□□□ 1.05
SHMT2-206ENST00000553529 AGBL1Q96MI9 1066 aa21.58■■□□□ 1.05
SHMT2-206ENST00000553529 SLC38A10Q9HBR0 1119 aa21.58■■□□□ 1.05
SHMT2-206ENST00000553529 DIAPH3Q9NSV4 1193 aa21.58■■□□□ 1.05
SHMT2-206ENST00000553529 DDX20Q9UHI6 824 aaKnown RBP21.58■■□□□ 1.05
SHMT2-206ENST00000553529 ZMYND8Q9ULU4 1186 aaPredicted RBP21.58■■□□□ 1.05
SHMT2-206ENST00000553529 ZNF536O15090 1300 aa21.57■■□□□ 1.04
SHMT2-206ENST00000553529 SMCHD1A6NHR9 2005 aa21.57■■□□□ 1.04
SHMT2-206ENST00000553529 STRNO43815 780 aa21.57■■□□□ 1.04
SHMT2-206ENST00000553529 SLC25A27O95847 323 aa21.57■■□□□ 1.04
SHMT2-206ENST00000553529 SYN1P17600 705 aa21.57■■□□□ 1.04
SHMT2-206ENST00000553529 SLC16A2P36021 539 aa21.57■■□□□ 1.04
SHMT2-206ENST00000553529 OLFML2BQ68BL8 750 aa21.57■■□□□ 1.04
SHMT2-206ENST00000553529 PRPF38AQ8NAV1 312 aaKnown RBP21.57■■□□□ 1.04
SHMT2-206ENST00000553529 FGD4Q96M96 766 aa21.57■■□□□ 1.04
SHMT2-206ENST00000553529 TMEM47Q9BQJ4 181 aa21.57■■□□□ 1.04
SHMT2-206ENST00000553529 HTATIP2Q9BUP3 242 aa21.57■■□□□ 1.04
SHMT2-206ENST00000553529 SLC1A4P43007 532 aa21.56■■□□□ 1.04
SHMT2-206ENST00000553529 NOVP48745 357 aa21.56■■□□□ 1.04
SHMT2-206ENST00000553529 GJC2Q5T442 439 aaPredicted RBP21.56■■□□□ 1.04
SHMT2-206ENST00000553529 RCSD1Q6JBY9 416 aa21.56■■□□□ 1.04
SHMT2-206ENST00000553529 CCDC174Q6PII3 467 aa21.56■■□□□ 1.04
SHMT2-206ENST00000553529 TEX13BQ9BXU2 312 aa21.56■■□□□ 1.04
SHMT2-206ENST00000553529 FEM1BQ9UK73 627 aa21.56■■□□□ 1.04
SHMT2-206ENST00000553529 ZMYM6O95789 1325 aa21.55■■□□□ 1.04
SHMT2-206ENST00000553529 EVI5O60447 810 aa21.55■■□□□ 1.04
SHMT2-206ENST00000553529 SLC34A2O95436 690 aa21.55■■□□□ 1.04
SHMT2-206ENST00000553529 MYCNP04198 464 aaPredicted RBP21.55■■□□□ 1.04
SHMT2-206ENST00000553529 COL6A1P12109 1028 aa21.55■■□□□ 1.04
SHMT2-206ENST00000553529 IRX5P78411 483 aaPredicted RBP21.55■■□□□ 1.04
SHMT2-206ENST00000553529 IKQ13123 557 aaPredicted RBP21.55■■□□□ 1.04
SHMT2-206ENST00000553529 KCTD2Q14681 263 aa21.55■■□□□ 1.04
SHMT2-206ENST00000553529 LRRC26Q2I0M4 334 aa21.55■■□□□ 1.04
SHMT2-206ENST00000553529 CCDC96Q2M329 555 aa21.55■■□□□ 1.04
SHMT2-206ENST00000553529 AKNAD1Q5T1N1 836 aa21.55■■□□□ 1.04
SHMT2-206ENST00000553529 ABRAQ8N0Z2 381 aa21.55■■□□□ 1.04
SHMT2-206ENST00000553529 STAG1Q8WVM7 1258 aa21.55■■□□□ 1.04
SHMT2-206ENST00000553529 GMCL1Q96IK5 515 aa21.55■■□□□ 1.04
SHMT2-206ENST00000553529 PURBQ96QR8 312 aaKnown RBP21.55■■□□□ 1.04
SHMT2-206ENST00000553529 CPVLQ9H3G5 476 aa21.55■■□□□ 1.04
SHMT2-206ENST00000553529 GPCPD1Q9NPB8 672 aa21.55■■□□□ 1.04
SHMT2-206ENST00000553529 RBM27Q9P2N5 1060 aaKnown RBP21.55■■□□□ 1.04
SHMT2-206ENST00000553529 TAF6LQ9Y6J9 622 aa21.55■■□□□ 1.04
SHMT2-206ENST00000553529 LCTP09848 1927 aa21.55■■□□□ 1.04
SHMT2-206ENST00000553529 ZBED4O75132 1171 aa21.54■■□□□ 1.04
SHMT2-206ENST00000553529 PTGS1P23219 599 aa21.54■■□□□ 1.04
SHMT2-206ENST00000553529 ANKLE1Q8NAG6 615 aa21.54■■□□□ 1.04
SHMT2-206ENST00000553529 PRR12Q9ULL5 1215 aa21.54■■□□□ 1.04
SHMT2-206ENST00000553529 MCM3APO60318 1980 aa21.54■■□□□ 1.04
SHMT2-206ENST00000553529 STAT2P52630 851 aa21.53■■□□□ 1.04
SHMT2-206ENST00000553529 CNTN2Q02246 1040 aa21.53■■□□□ 1.04
SHMT2-206ENST00000553529 MUM1L1Q5H9M0 696 aa21.53■■□□□ 1.04
SHMT2-206ENST00000553529 DNAJC25-GNG10A0A024R161 153 aa21.52■■□□□ 1.04
SHMT2-206ENST00000553529 B4E1Z4 1266 aa21.52■■□□□ 1.04
SHMT2-206ENST00000553529 ADCY6O43306 1168 aa21.52■■□□□ 1.04
SHMT2-206ENST00000553529 ATN1P54259 1190 aaPredicted RBP21.52■■□□□ 1.04
SHMT2-206ENST00000553529 PTH1RQ03431 593 aa21.52■■□□□ 1.04
SHMT2-206ENST00000553529 MFSD6Q6ZSS7 791 aa21.52■■□□□ 1.04
SHMT2-206ENST00000553529 ASTN1O14525 1302 aa21.52■■□□□ 1.03
SHMT2-206ENST00000553529 ATP2A1O14983 1001 aa21.51■■□□□ 1.03
SHMT2-206ENST00000553529 KDM4AO75164 1064 aa21.51■■□□□ 1.03
SHMT2-206ENST00000553529 SNAI1O95863 264 aaPredicted RBP21.51■■□□□ 1.03
SHMT2-206ENST00000553529 ZNF865P0CJ78 1059 aaPredicted RBP21.51■■□□□ 1.03
SHMT2-206ENST00000553529 TINF2Q9BSI4 451 aa21.51■■□□□ 1.03
SHMT2-206ENST00000553529 SENP6Q9GZR1 1112 aaPredicted RBP21.51■■□□□ 1.03
SHMT2-206ENST00000553529 SYNPO2Q9UMS6 1093 aa21.51■■□□□ 1.03
SHMT2-206ENST00000553529 CTDP1Q9Y5B0 961 aaPredicted RBP21.51■■□□□ 1.03
SHMT2-206ENST00000553529 ZNF213O14771 459 aa21.5■■□□□ 1.03
SHMT2-206ENST00000553529 SEPT4O43236 478 aa21.5■■□□□ 1.03
SHMT2-206ENST00000553529 GOLGA8HP0CJ92 632 aa21.5■■□□□ 1.03
SHMT2-206ENST00000553529 ALAS1P13196 640 aa21.5■■□□□ 1.03
SHMT2-206ENST00000553529 PRO3102Q9H379 93 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms