RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.83■■■□□ 2.05
TDP1-205ENST00000553527 SGPL1O95470 568 aa27.82■■■□□ 2.04
TDP1-205ENST00000553527 SLC25A27O95847 323 aa27.82■■■□□ 2.04
TDP1-205ENST00000553527 PRKAR2AP13861 404 aaKnown RBP27.82■■■□□ 2.04
TDP1-205ENST00000553527 BMP2KLQ5H9B9 411 aa27.82■■■□□ 2.04
TDP1-205ENST00000553527 RASGRP2Q7LDG7 609 aa27.82■■■□□ 2.04
TDP1-205ENST00000553527 REPS2Q8NFH8 660 aa27.82■■■□□ 2.04
TDP1-205ENST00000553527 FLRT1Q9NZU1 646 aa27.82■■■□□ 2.04
TDP1-205ENST00000553527 ZNF214Q9UL59 606 aaPredicted RBP27.82■■■□□ 2.04
TDP1-205ENST00000553527 RPTORQ8N122 1335 aa27.82■■■□□ 2.04
TDP1-205ENST00000553527 PDE4DIPQ5VU43 2346 aa27.81■■■□□ 2.04
TDP1-205ENST00000553527 RIOX2Q8IUF8 465 aa27.81■■■□□ 2.04
TDP1-205ENST00000553527 GMCL1Q96IK5 515 aa27.81■■■□□ 2.04
TDP1-205ENST00000553527 TMEM47Q9BQJ4 181 aa27.81■■■□□ 2.04
TDP1-205ENST00000553527 RAVER2Q9HCJ3 691 aaKnown RBP27.81■■■□□ 2.04
TDP1-205ENST00000553527 TCP11L1Q9NUJ3 509 aa27.81■■■□□ 2.04
TDP1-205ENST00000553527 B4E1Z4 1266 aa27.8■■■□□ 2.04
TDP1-205ENST00000553527 KDM4AO75164 1064 aa27.8■■■□□ 2.04
TDP1-205ENST00000553527 FCER1AP12319 257 aa27.8■■■□□ 2.04
TDP1-205ENST00000553527 STAT2P52630 851 aa27.8■■■□□ 2.04
TDP1-205ENST00000553527 PTH1RQ03431 593 aa27.8■■■□□ 2.04
TDP1-205ENST00000553527 CACNB2Q08289 660 aaPredicted RBP27.8■■■□□ 2.04
TDP1-205ENST00000553527 CCDC96Q2M329 555 aa27.8■■■□□ 2.04
TDP1-205ENST00000553527 SNRNP48Q6IEG0 339 aaKnown RBP27.8■■■□□ 2.04
TDP1-205ENST00000553527 RCSD1Q6JBY9 416 aa27.8■■■□□ 2.04
TDP1-205ENST00000553527 PAK6Q9NQU5 681 aaPredicted RBP27.8■■■□□ 2.04
TDP1-205ENST00000553527 RAD50Q92878 1312 aa27.8■■■□□ 2.04
TDP1-205ENST00000553527 COBLO75128 1261 aa27.79■■■□□ 2.04
TDP1-205ENST00000553527 TOP1P11387 765 aaKnown RBP27.79■■■□□ 2.04
TDP1-205ENST00000553527 CHURC1Q8WUH1 139 aa27.79■■■□□ 2.04
TDP1-205ENST00000553527 MMP19Q99542 508 aa27.79■■■□□ 2.04
TDP1-205ENST00000553527 NOVP48745 357 aa27.78■■■□□ 2.04
TDP1-205ENST00000553527 MFSD14CQ5VZR4 134 aa27.78■■■□□ 2.04
TDP1-205ENST00000553527 TEX13BQ9BXU2 312 aa27.78■■■□□ 2.04
TDP1-205ENST00000553527 RIPK3Q9Y572 518 aa27.78■■■□□ 2.04
TDP1-205ENST00000553527 SGSM2O43147 1006 aa27.77■■■□□ 2.04
TDP1-205ENST00000553527 CCND3P30281 292 aaPredicted RBP27.77■■■□□ 2.04
TDP1-205ENST00000553527 CYP2C19P33261 490 aa27.77■■■□□ 2.04
TDP1-205ENST00000553527 SNAP25P60880 206 aa27.77■■■□□ 2.04
TDP1-205ENST00000553527 FAM160B2Q86V87 743 aa27.77■■■□□ 2.04
TDP1-205ENST00000553527 SLC38A10Q9HBR0 1119 aa27.77■■■□□ 2.04
TDP1-205ENST00000553527 SLC5A4Q9NY91 659 aa27.77■■■□□ 2.04
TDP1-205ENST00000553527 PLXNA1Q9UIW2 1896 aa27.76■■■□□ 2.04
TDP1-205ENST00000553527 FRMPD2Q68DX3 1309 aaPredicted RBP27.76■■■□□ 2.03
TDP1-205ENST00000553527 PGK2P07205 417 aa27.76■■■□□ 2.03
TDP1-205ENST00000553527 HOXC6P09630 235 aa27.76■■■□□ 2.03
TDP1-205ENST00000553527 KCTD2Q14681 263 aa27.76■■■□□ 2.03
TDP1-205ENST00000553527 MAP3K21Q5TCX8 1036 aa27.76■■■□□ 2.03
TDP1-205ENST00000553527 IQCA1Q86XH1 822 aa27.76■■■□□ 2.03
TDP1-205ENST00000553527 TTC14Q96N46 770 aa27.76■■■□□ 2.03
TDP1-205ENST00000553527 GPCPD1Q9NPB8 672 aa27.76■■■□□ 2.03
TDP1-205ENST00000553527 ZSWIM5Q9P217 1185 aa27.76■■■□□ 2.03
TDP1-205ENST00000553527 TTBK2Q6IQ55 1244 aa27.75■■■□□ 2.03
TDP1-205ENST00000553527 ABRAQ8N0Z2 381 aa27.75■■■□□ 2.03
TDP1-205ENST00000553527 DCAF4Q8WV16 495 aa27.75■■■□□ 2.03
TDP1-205ENST00000553527 KRT23Q9C075 422 aa27.75■■■□□ 2.03
TDP1-205ENST00000553527 ZNF236Q9UL36 1845 aa27.74■■■□□ 2.03
TDP1-205ENST00000553527 CNGA1P29973 690 aa27.74■■■□□ 2.03
TDP1-205ENST00000553527 COPB2P35606 906 aa27.74■■■□□ 2.03
TDP1-205ENST00000553527 SLC16A2P36021 539 aa27.74■■■□□ 2.03
TDP1-205ENST00000553527 CCDC174Q6PII3 467 aa27.74■■■□□ 2.03
TDP1-205ENST00000553527 HOMER2Q9NSB8 354 aa27.74■■■□□ 2.03
TDP1-205ENST00000553527 PRR12Q9ULL5 1215 aa27.74■■■□□ 2.03
TDP1-205ENST00000553527 FARP2O94887 1054 aaPredicted RBP27.73■■■□□ 2.03
TDP1-205ENST00000553527 CNNM2Q9H8M5 875 aa27.73■■■□□ 2.03
TDP1-205ENST00000553527 U3KPZ7 1027 aaPredicted RBP27.73■■■□□ 2.03
TDP1-205ENST00000553527 KIAA1211Q6ZU35 1233 aa27.72■■■□□ 2.03
TDP1-205ENST00000553527 DDX11Q96FC9 970 aa27.72■■■□□ 2.03
TDP1-205ENST00000553527 AGBL1Q96MI9 1066 aa27.72■■■□□ 2.03
TDP1-205ENST00000553527 ZSCAN10Q96SZ4 725 aaPredicted RBP27.72■■■□□ 2.03
TDP1-205ENST00000553527 CRISPLD2Q9H0B8 497 aa27.72■■■□□ 2.03
TDP1-205ENST00000553527 SMCHD1A6NHR9 2005 aa27.72■■■□□ 2.03
TDP1-205ENST00000553527 ATP2A1O14983 1001 aa27.71■■■□□ 2.03
TDP1-205ENST00000553527 CYP21A2P08686 494 aa27.71■■■□□ 2.03
TDP1-205ENST00000553527 FDX1P10109 184 aa27.71■■■□□ 2.03
TDP1-205ENST00000553527 PDHBP11177 359 aa27.71■■■□□ 2.03
TDP1-205ENST00000553527 DGKHQ86XP1 1220 aa27.71■■■□□ 2.03
TDP1-205ENST00000553527 MAML3Q96JK9 1138 aa27.71■■■□□ 2.03
TDP1-205ENST00000553527 PLA2G6O60733 806 aa27.7■■■□□ 2.02
TDP1-205ENST00000553527 OAZ1P54368 228 aa27.7■■■□□ 2.02
TDP1-205ENST00000553527 TRDNQ13061 729 aa27.7■■■□□ 2.02
TDP1-205ENST00000553527 CCDC178Q5BJE1 867 aa27.7■■■□□ 2.02
TDP1-205ENST00000553527 PRAMEF19Q5SWL8 479 aa27.7■■■□□ 2.02
TDP1-205ENST00000553527 OLFML2BQ68BL8 750 aa27.7■■■□□ 2.02
TDP1-205ENST00000553527 UBAC1Q9BSL1 405 aa27.7■■■□□ 2.02
TDP1-205ENST00000553527 KAT14Q9H8E8 782 aa27.7■■■□□ 2.02
TDP1-205ENST00000553527 ANKRD35Q8N283 1001 aa27.69■■■□□ 2.02
TDP1-205ENST00000553527 PAWRQ96IZ0 340 aaKnown RBP27.69■■■□□ 2.02
TDP1-205ENST00000553527 TNKSO95271 1327 aa27.68■■■□□ 2.02
TDP1-205ENST00000553527 GOLGA8HP0CJ92 632 aa27.68■■■□□ 2.02
TDP1-205ENST00000553527 ALAS1P13196 640 aa27.68■■■□□ 2.02
TDP1-205ENST00000553527 NT5C2P49902 561 aa27.68■■■□□ 2.02
TDP1-205ENST00000553527 CYB5R4Q7L1T6 521 aa27.68■■■□□ 2.02
TDP1-205ENST00000553527 ENAHQ8N8S7 591 aaPredicted RBP27.68■■■□□ 2.02
TDP1-205ENST00000553527 PNMA1Q8ND90 353 aa27.68■■■□□ 2.02
TDP1-205ENST00000553527 TRPV1Q8NER1 839 aa27.68■■■□□ 2.02
TDP1-205ENST00000553527 DPF3Q92784 378 aa27.68■■■□□ 2.02
TDP1-205ENST00000553527 MAP4K1Q92918 833 aa27.68■■■□□ 2.02
TDP1-205ENST00000553527 ESYT1Q9BSJ8 1104 aa27.68■■■□□ 2.02
TDP1-205ENST00000553527 RBM8AQ9Y5S9 174 aaKnown RBP27.68■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms