RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 TSPY3P0CV98 308 aa8.42□□□□□ -1.06
ATXN3-221ENST00000553498 TSPY8P0CW00 308 aa8.42□□□□□ -1.06
ATXN3-221ENST00000553498 CMA1P23946 247 aa8.42□□□□□ -1.06
ATXN3-221ENST00000553498 NOVP48745 357 aa8.42□□□□□ -1.06
ATXN3-221ENST00000553498 GTF2IP78347 998 aa8.42□□□□□ -1.06
ATXN3-221ENST00000553498 TFAP4Q01664 338 aa8.42□□□□□ -1.06
ATXN3-221ENST00000553498 TRIM32Q13049 653 aa8.42□□□□□ -1.06
ATXN3-221ENST00000553498 SOGA3Q5TF21 947 aa8.42□□□□□ -1.06
ATXN3-221ENST00000553498 GALNT17Q6IS24 598 aa8.42□□□□□ -1.06
ATXN3-221ENST00000553498 FAM173BQ6P4H8 233 aa8.42□□□□□ -1.06
ATXN3-221ENST00000553498 Q6ZNB5 142 aa8.42□□□□□ -1.06
ATXN3-221ENST00000553498 TMTC3Q6ZXV5 915 aa8.42□□□□□ -1.06
ATXN3-221ENST00000553498 NOSTRINQ8IVI9 506 aa8.42□□□□□ -1.06
ATXN3-221ENST00000553498 ELOA2Q8IYF1 753 aaPredicted RBP8.42□□□□□ -1.06
ATXN3-221ENST00000553498 PROCA1Q8NCQ7 364 aaPredicted RBP8.42□□□□□ -1.06
ATXN3-221ENST00000553498 TGFBRAP1Q8WUH2 860 aa8.42□□□□□ -1.06
ATXN3-221ENST00000553498 NUP133Q8WUM0 1156 aa8.42□□□□□ -1.06
ATXN3-221ENST00000553498 MRPS27Q92552 414 aaKnown RBP8.42□□□□□ -1.06
ATXN3-221ENST00000553498 PHKBQ93100 1093 aa8.42□□□□□ -1.06
ATXN3-221ENST00000553498 TEKT1Q969V4 418 aa8.42□□□□□ -1.06
ATXN3-221ENST00000553498 TRIM44Q96DX7 344 aaPredicted RBP8.42□□□□□ -1.06
ATXN3-221ENST00000553498 PGBD1Q96JS3 809 aa8.42□□□□□ -1.06
ATXN3-221ENST00000553498 TIGD1Q96MW7 591 aa8.42□□□□□ -1.06
ATXN3-221ENST00000553498 ZKSCAN3Q9BRR0 538 aa8.42□□□□□ -1.06
ATXN3-221ENST00000553498 FUCA2Q9BTY2 467 aa8.42□□□□□ -1.06
ATXN3-221ENST00000553498 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.42□□□□□ -1.06
ATXN3-221ENST00000553498 RBSNQ9H1K0 784 aa8.42□□□□□ -1.06
ATXN3-221ENST00000553498 SENP2Q9HC62 589 aa8.42□□□□□ -1.06
ATXN3-221ENST00000553498 INCENPQ9NQS7 918 aa8.42□□□□□ -1.06
ATXN3-221ENST00000553498 SH3GLB2Q9NR46 395 aa8.42□□□□□ -1.06
ATXN3-221ENST00000553498 EVA1BQ9NVM1 165 aa8.42□□□□□ -1.06
ATXN3-221ENST00000553498 DACT1Q9NYF0 836 aa8.42□□□□□ -1.06
ATXN3-221ENST00000553498 RGS17Q9UGC6 210 aaPredicted RBP8.42□□□□□ -1.06
ATXN3-221ENST00000553498 FLT1P17948 1338 aa8.42□□□□□ -1.06
ATXN3-221ENST00000553498 C10orf71Q711Q0 1435 aa8.42□□□□□ -1.06
ATXN3-221ENST00000553498 PLIN4Q96Q06 1357 aa8.41□□□□□ -1.06
ATXN3-221ENST00000553498 FAM237AA0A1B0GTK4 181 aa8.41□□□□□ -1.06
ATXN3-221ENST00000553498 USP17L8P0C7I0 530 aa8.41□□□□□ -1.06
ATXN3-221ENST00000553498 CALML3P27482 149 aa8.41□□□□□ -1.06
ATXN3-221ENST00000553498 TRAPPC10P48553 1259 aa8.41□□□□□ -1.06
ATXN3-221ENST00000553498 MMP14P50281 582 aa8.41□□□□□ -1.06
ATXN3-221ENST00000553498 GUCY1B3Q02153 619 aa8.41□□□□□ -1.06
ATXN3-221ENST00000553498 SASS6Q6UVJ0 657 aa8.41□□□□□ -1.06
ATXN3-221ENST00000553498 LYPD8Q6UX82 237 aa8.41□□□□□ -1.06
ATXN3-221ENST00000553498 CCAR1Q8IX12 1150 aaKnown RBP8.41□□□□□ -1.06
ATXN3-221ENST00000553498 RTKN2Q8IZC4 609 aa8.41□□□□□ -1.06
ATXN3-221ENST00000553498 NEDD1Q8NHV4 660 aa8.41□□□□□ -1.06
ATXN3-221ENST00000553498 ZNF622Q969S3 477 aaKnown RBP eCLIP8.41□□□□□ -1.06
ATXN3-221ENST00000553498 PDLIM2Q96JY6 352 aa8.41□□□□□ -1.06
ATXN3-221ENST00000553498 MYL10Q9BUA6 226 aa8.41□□□□□ -1.06
ATXN3-221ENST00000553498 EHD4Q9H223 541 aa8.41□□□□□ -1.06
ATXN3-221ENST00000553498 DHX36Q9H2U1 1008 aaKnown RBP8.41□□□□□ -1.06
ATXN3-221ENST00000553498 CYP2D7A0A087X1C5 515 aa8.4□□□□□ -1.06
ATXN3-221ENST00000553498 hCG_1984214I3L0E3 225 aa8.4□□□□□ -1.06
ATXN3-221ENST00000553498 ZBTB24O43167 697 aaPredicted RBP8.4□□□□□ -1.06
ATXN3-221ENST00000553498 PRDM1O75626 825 aa8.4□□□□□ -1.06
ATXN3-221ENST00000553498 HLA-DOAP06340 250 aa8.4□□□□□ -1.06
ATXN3-221ENST00000553498 CCNYL3P0C7X3 344 aa8.4□□□□□ -1.06
ATXN3-221ENST00000553498 LIG1P18858 919 aa8.4□□□□□ -1.06
ATXN3-221ENST00000553498 RXRAP19793 462 aa8.4□□□□□ -1.06
ATXN3-221ENST00000553498 KIAA2012Q0VF49 1180 aa8.4□□□□□ -1.06
ATXN3-221ENST00000553498 GRM4Q14833 912 aa8.4□□□□□ -1.06
ATXN3-221ENST00000553498 EZH2Q15910 746 aaKnown RBP8.4□□□□□ -1.06
ATXN3-221ENST00000553498 RCSD1Q6JBY9 416 aa8.4□□□□□ -1.06
ATXN3-221ENST00000553498 POTEAQ6S8J7 498 aa8.4□□□□□ -1.06
ATXN3-221ENST00000553498 MAPKAPK5Q8IW41 473 aa8.4□□□□□ -1.06
ATXN3-221ENST00000553498 CCDC144CPQ8IYA2 1237 aa8.4□□□□□ -1.06
ATXN3-221ENST00000553498 DIS3L2Q8IYB7 885 aaKnown RBP8.4□□□□□ -1.06
ATXN3-221ENST00000553498 ZNF713Q8N859 430 aaPredicted RBP8.4□□□□□ -1.06
ATXN3-221ENST00000553498 PNMA1Q8ND90 353 aa8.4□□□□□ -1.06
ATXN3-221ENST00000553498 ENGASEQ8NFI3 743 aa8.4□□□□□ -1.06
ATXN3-221ENST00000553498 FAM200AQ8TCP9 573 aa8.4□□□□□ -1.06
ATXN3-221ENST00000553498 CCDC12Q8WUD4 166 aaPredicted RBP8.4□□□□□ -1.06
ATXN3-221ENST00000553498 C7orf43Q8WVR3 580 aa8.4□□□□□ -1.06
ATXN3-221ENST00000553498 CCDC34Q96HJ3 373 aa8.4□□□□□ -1.06
ATXN3-221ENST00000553498 CCDC17Q96LX7 622 aa8.4□□□□□ -1.06
ATXN3-221ENST00000553498 ZDHHC15Q96MV8 337 aa8.4□□□□□ -1.06
ATXN3-221ENST00000553498 PHF20Q9BVI0 1012 aa8.4□□□□□ -1.06
ATXN3-221ENST00000553498 HOOK1Q9UJC3 728 aaKnown RBP8.4□□□□□ -1.06
ATXN3-221ENST00000553498 SERPINA10Q9UK55 444 aa8.4□□□□□ -1.06
ATXN3-221ENST00000553498 NOL7Q9UMY1 257 aaKnown RBP8.4□□□□□ -1.06
ATXN3-221ENST00000553498 PCDHA7Q9UN72 937 aa8.4□□□□□ -1.06
ATXN3-221ENST00000553498 TTF2Q9UNY4 1162 aaKnown RBP8.4□□□□□ -1.06
ATXN3-221ENST00000553498 JAG2Q9Y219 1238 aa8.4□□□□□ -1.06
ATXN3-221ENST00000553498 DAGLAQ9Y4D2 1042 aa8.4□□□□□ -1.06
ATXN3-221ENST00000553498 MYH7P12883 1935 aa8.4□□□□□ -1.06
ATXN3-221ENST00000553498 BRWD3Q6RI45 1802 aa8.4□□□□□ -1.07
ATXN3-221ENST00000553498 KAT6BQ8WYB5 2073 aa8.39□□□□□ -1.07
ATXN3-221ENST00000553498 USP17L3A6NCW0 530 aa8.39□□□□□ -1.07
ATXN3-221ENST00000553498 USP17L4A6NCW7 530 aa8.39□□□□□ -1.07
ATXN3-221ENST00000553498 KIF28PB7ZC32 967 aa8.39□□□□□ -1.07
ATXN3-221ENST00000553498 CUTAO60888 179 aa8.39□□□□□ -1.07
ATXN3-221ENST00000553498 CYP2D6P10635 497 aa8.39□□□□□ -1.07
ATXN3-221ENST00000553498 TOP1P11387 765 aaKnown RBP8.39□□□□□ -1.07
ATXN3-221ENST00000553498 SCG2P13521 617 aa8.39□□□□□ -1.07
ATXN3-221ENST00000553498 RASA1P20936 1047 aa8.39□□□□□ -1.07
ATXN3-221ENST00000553498 KRT2P35908 639 aa8.39□□□□□ -1.07
ATXN3-221ENST00000553498 CDK8P49336 464 aa8.39□□□□□ -1.07
ATXN3-221ENST00000553498 SKOR1P84550 965 aa8.39□□□□□ -1.07
ATXN3-221ENST00000553498 GABPAQ06546 454 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms