RNA–Protein interactions for RNA: ENST00000553486.5

ABCD4-218, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-218ENST00000553486 TPM3P06753 285 aa17.54■□□□□ 0.4
ABCD4-218ENST00000553486 PTPREP23469 700 aa17.54■□□□□ 0.4
ABCD4-218ENST00000553486 ZNF157P51786 506 aaPredicted RBP17.54■□□□□ 0.4
ABCD4-218ENST00000553486 DACT2Q5SW24 774 aa17.54■□□□□ 0.4
ABCD4-218ENST00000553486 C11orf57Q6ZUT1 292 aaPredicted RBP17.54■□□□□ 0.4
ABCD4-218ENST00000553486 ZNF579Q8NAF0 562 aaKnown RBP17.54■□□□□ 0.4
ABCD4-218ENST00000553486 NEDD1Q8NHV4 660 aa17.54■□□□□ 0.4
ABCD4-218ENST00000553486 SHISA4Q96DD7 197 aa17.54■□□□□ 0.4
ABCD4-218ENST00000553486 CLIC6Q96NY7 704 aa17.54■□□□□ 0.4
ABCD4-218ENST00000553486 FAM13BQ9NYF5 915 aa17.54■□□□□ 0.4
ABCD4-218ENST00000553486 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.54■□□□□ 0.4
ABCD4-218ENST00000553486 PCDHB6Q9Y5E3 794 aa17.54■□□□□ 0.4
ABCD4-218ENST00000553486 PSME4Q14997 1843 aa17.54■□□□□ 0.4
ABCD4-218ENST00000553486 TRIM75PA6NK02 468 aa17.54■□□□□ 0.4
ABCD4-218ENST00000553486 BECN2A8MW95 431 aa17.54■□□□□ 0.4
ABCD4-218ENST00000553486 LZTS2Q9BRK4 669 aa17.54■□□□□ 0.4
ABCD4-218ENST00000553486 TTF2Q9UNY4 1162 aaKnown RBP17.54■□□□□ 0.4
ABCD4-218ENST00000553486 POLR2AP24928 1970 aaKnown RBP17.54■□□□□ 0.4
ABCD4-218ENST00000553486 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.53■□□□□ 0.4
ABCD4-218ENST00000553486 ZNF500O60304 480 aaPredicted RBP17.53■□□□□ 0.4
ABCD4-218ENST00000553486 CALML3P27482 149 aa17.53■□□□□ 0.4
ABCD4-218ENST00000553486 NLRP5P59047 1200 aa17.53■□□□□ 0.4
ABCD4-218ENST00000553486 STRIP1Q5VSL9 837 aa17.53■□□□□ 0.4
ABCD4-218ENST00000553486 TMEM47Q9BQJ4 181 aa17.53■□□□□ 0.4
ABCD4-218ENST00000553486 SH3GLB2Q9NR46 395 aa17.53■□□□□ 0.4
ABCD4-218ENST00000553486 FBXO2Q9UK22 296 aaPredicted RBP17.53■□□□□ 0.4
ABCD4-218ENST00000553486 KCNH3Q9ULD8 1083 aa17.53■□□□□ 0.4
ABCD4-218ENST00000553486 SRPRBQ9Y5M8 271 aaKnown RBP17.53■□□□□ 0.4
ABCD4-218ENST00000553486 MYO3BQ8WXR4 1341 aa17.53■□□□□ 0.4
ABCD4-218ENST00000553486 F8W031 263 aaPredicted RBP17.52■□□□□ 0.4
ABCD4-218ENST00000553486 ELOA2Q8IYF1 753 aaPredicted RBP17.52■□□□□ 0.4
ABCD4-218ENST00000553486 OGFOD1Q8N543 542 aa17.52■□□□□ 0.4
ABCD4-218ENST00000553486 CERS5Q8N5B7 392 aa17.52■□□□□ 0.4
ABCD4-218ENST00000553486 MXD3Q9BW11 206 aa17.52■□□□□ 0.4
ABCD4-218ENST00000553486 TRIM5Q9C035 493 aa17.52■□□□□ 0.4
ABCD4-218ENST00000553486 MAD2L2Q9UI95 211 aa17.52■□□□□ 0.4
ABCD4-218ENST00000553486 HOOK1Q9UJC3 728 aaKnown RBP17.52■□□□□ 0.4
ABCD4-218ENST00000553486 STX8Q9UNK0 236 aa17.52■□□□□ 0.4
ABCD4-218ENST00000553486 MYH8P13535 1937 aa17.52■□□□□ 0.4
ABCD4-218ENST00000553486 SLC10A3P09131 477 aa17.51■□□□□ 0.39
ABCD4-218ENST00000553486 ATP2B1P20020 1258 aa17.51■□□□□ 0.39
ABCD4-218ENST00000553486 NLRP12P59046 1061 aa17.51■□□□□ 0.39
ABCD4-218ENST00000553486 FKBP1BP68106 108 aa17.51■□□□□ 0.39
ABCD4-218ENST00000553486 NBPF9Q3BBW0 867 aa17.51■□□□□ 0.39
ABCD4-218ENST00000553486 HHIPL2Q6UWX4 724 aa17.51■□□□□ 0.39
ABCD4-218ENST00000553486 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.51■□□□□ 0.39
ABCD4-218ENST00000553486 ERCC4Q92889 916 aaPredicted RBP17.51■□□□□ 0.39
ABCD4-218ENST00000553486 TNFRSF25Q93038 417 aa17.51■□□□□ 0.39
ABCD4-218ENST00000553486 KRBA2Q6ZNG9 492 aa17.51■□□□□ 0.39
ABCD4-218ENST00000553486 BPIFA3Q9BQP9 254 aa17.51■□□□□ 0.39
ABCD4-218ENST00000553486 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.51■□□□□ 0.39
ABCD4-218ENST00000553486 TRAPPC10P48553 1259 aa17.5■□□□□ 0.39
ABCD4-218ENST00000553486 ZNF75DP51815 510 aa17.5■□□□□ 0.39
ABCD4-218ENST00000553486 NPY5RQ15761 445 aa17.5■□□□□ 0.39
ABCD4-218ENST00000553486 SARM1Q6SZW1 724 aa17.5■□□□□ 0.39
ABCD4-218ENST00000553486 PLA2G4DQ86XP0 818 aa17.5■□□□□ 0.39
ABCD4-218ENST00000553486 FAM177A1Q8N128 213 aaPredicted RBP17.5■□□□□ 0.39
ABCD4-218ENST00000553486 STAG2Q8N3U4 1231 aa17.5■□□□□ 0.39
ABCD4-218ENST00000553486 CNNM3Q8NE01 707 aa17.5■□□□□ 0.39
ABCD4-218ENST00000553486 TEKT1Q969V4 418 aa17.5■□□□□ 0.39
ABCD4-218ENST00000553486 USP40Q9NVE5 1235 aa17.5■□□□□ 0.39
ABCD4-218ENST00000553486 SAGE1Q9NXZ1 904 aa17.5■□□□□ 0.39
ABCD4-218ENST00000553486 SCAF8Q9UPN6 1271 aaKnown RBP17.5■□□□□ 0.39
ABCD4-218ENST00000553486 PALM3A6NDB9 673 aaPredicted RBP17.49■□□□□ 0.39
ABCD4-218ENST00000553486 WNT10BO00744 389 aa17.49■□□□□ 0.39
ABCD4-218ENST00000553486 TOP1P11387 765 aaKnown RBP17.49■□□□□ 0.39
ABCD4-218ENST00000553486 FKBP1AP62942 108 aaKnown RBP17.49■□□□□ 0.39
ABCD4-218ENST00000553486 PICALMQ13492 652 aa17.49■□□□□ 0.39
ABCD4-218ENST00000553486 DHX40Q8IX18 779 aaKnown RBP17.49■□□□□ 0.39
ABCD4-218ENST00000553486 PIBF1Q8WXW3 757 aa17.49■□□□□ 0.39
ABCD4-218ENST00000553486 TUBE1Q9UJT0 475 aa17.49■□□□□ 0.39
ABCD4-218ENST00000553486 MMP14P50281 582 aa17.49■□□□□ 0.39
ABCD4-218ENST00000553486 EARS2Q5JPH6 523 aaKnown RBP17.49■□□□□ 0.39
ABCD4-218ENST00000553486 TTC38Q5R3I4 469 aa17.49■□□□□ 0.39
ABCD4-218ENST00000553486 CCDC148Q8NFR7 591 aa17.49■□□□□ 0.39
ABCD4-218ENST00000553486 FERMT2Q96AC1 680 aa17.49■□□□□ 0.39
ABCD4-218ENST00000553486 MRIQ9BWK5 157 aa17.49■□□□□ 0.39
ABCD4-218ENST00000553486 MCOLN1Q9GZU1 580 aa17.49■□□□□ 0.39
ABCD4-218ENST00000553486 SWAP70Q9UH65 585 aa17.49■□□□□ 0.39
ABCD4-218ENST00000553486 FAM205CA6NFA0 338 aa17.48■□□□□ 0.39
ABCD4-218ENST00000553486 CCDC85CA6NKD9 419 aa17.48■□□□□ 0.39
ABCD4-218ENST00000553486 PARP1P09874 1014 aaKnown RBP17.48■□□□□ 0.39
ABCD4-218ENST00000553486 NOVP48745 357 aa17.48■□□□□ 0.39
ABCD4-218ENST00000553486 LONRF3Q496Y0 759 aa17.48■□□□□ 0.39
ABCD4-218ENST00000553486 GALNT17Q6IS24 598 aa17.48■□□□□ 0.39
ABCD4-218ENST00000553486 BLIDQ8IZY5 108 aa17.48■□□□□ 0.39
ABCD4-218ENST00000553486 PLIN4Q96Q06 1357 aa17.48■□□□□ 0.39
ABCD4-218ENST00000553486 PAPPA2Q9BXP8 1791 aa17.47■□□□□ 0.39
ABCD4-218ENST00000553486 ZNF646O15015 1829 aaPredicted RBP17.47■□□□□ 0.39
ABCD4-218ENST00000553486 A0A087WWV3 80 aa17.47■□□□□ 0.39
ABCD4-218ENST00000553486 SMTNL1A8MU46 457 aa17.47■□□□□ 0.39
ABCD4-218ENST00000553486 SMARCA1P28370 1054 aa17.47■□□□□ 0.39
ABCD4-218ENST00000553486 CDC25BP30305 580 aa17.47■□□□□ 0.39
ABCD4-218ENST00000553486 GABPAQ06546 454 aa17.47■□□□□ 0.39
ABCD4-218ENST00000553486 SPECC1Q5M775 1068 aa17.47■□□□□ 0.39
ABCD4-218ENST00000553486 KANK3Q6NY19 840 aa17.47■□□□□ 0.39
ABCD4-218ENST00000553486 RASAL3Q86YV0 1011 aa17.47■□□□□ 0.39
ABCD4-218ENST00000553486 DRC7Q8IY82 874 aa17.47■□□□□ 0.39
ABCD4-218ENST00000553486 AOPEPQ8N6M6 819 aa17.47■□□□□ 0.39
ABCD4-218ENST00000553486 SPC24Q8NBT2 197 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms