RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 SLFNL1Q499Z3 407 aa11.87□□□□□ -0.51
ACTN1-208ENST00000553370 C12orf60Q5U649 245 aa11.87□□□□□ -0.51
ACTN1-208ENST00000553370 C16orf86Q6ZW13 317 aa11.87□□□□□ -0.51
ACTN1-208ENST00000553370 TRPV1Q8NER1 839 aa11.87□□□□□ -0.51
ACTN1-208ENST00000553370 KANSL2Q9H9L4 492 aa11.87□□□□□ -0.51
ACTN1-208ENST00000553370 ZBTB40Q9NUA8 1239 aa11.87□□□□□ -0.51
ACTN1-208ENST00000553370 RCAN3Q9UKA8 241 aa11.87□□□□□ -0.51
ACTN1-208ENST00000553370 TMX2Q9Y320 296 aa11.87□□□□□ -0.51
ACTN1-208ENST00000553370 MINDY4BA8MYZ0 360 aa11.86□□□□□ -0.51
ACTN1-208ENST00000553370 APPP05067 770 aa11.86□□□□□ -0.51
ACTN1-208ENST00000553370 EEF2P13639 858 aaKnown RBP11.86□□□□□ -0.51
ACTN1-208ENST00000553370 TDO2P48775 406 aa11.86□□□□□ -0.51
ACTN1-208ENST00000553370 UBE3CQ15386 1083 aa11.86□□□□□ -0.51
ACTN1-208ENST00000553370 FAM83BQ5T0W9 1011 aa11.86□□□□□ -0.51
ACTN1-208ENST00000553370 ABRAQ8N0Z2 381 aa11.86□□□□□ -0.51
ACTN1-208ENST00000553370 FERMT2Q96AC1 680 aa11.86□□□□□ -0.51
ACTN1-208ENST00000553370 MAML3Q96JK9 1138 aa11.86□□□□□ -0.51
ACTN1-208ENST00000553370 CNPY2Q9Y2B0 182 aa11.86□□□□□ -0.51
ACTN1-208ENST00000553370 SMARCA5O60264 1052 aaPredicted RBP11.85□□□□□ -0.51
ACTN1-208ENST00000553370 COBLO75128 1261 aa11.85□□□□□ -0.51
ACTN1-208ENST00000553370 PGK2P07205 417 aa11.85□□□□□ -0.51
ACTN1-208ENST00000553370 STAT3P40763 770 aa11.85□□□□□ -0.51
ACTN1-208ENST00000553370 ADCYAP1R1P41586 468 aa11.85□□□□□ -0.51
ACTN1-208ENST00000553370 TMEM132BQ14DG7 1078 aa11.85□□□□□ -0.51
ACTN1-208ENST00000553370 LRRFIP1Q32MZ4 808 aaKnown RBP11.85□□□□□ -0.51
ACTN1-208ENST00000553370 TRIM60Q495X7 471 aa11.85□□□□□ -0.51
ACTN1-208ENST00000553370 KIAA1755Q5JYT7 1200 aa11.85□□□□□ -0.51
ACTN1-208ENST00000553370 PPP1R15BQ5SWA1 713 aa11.85□□□□□ -0.51
ACTN1-208ENST00000553370 PRAMEF19Q5SWL8 479 aa11.85□□□□□ -0.51
ACTN1-208ENST00000553370 ZNF697Q5TEC3 545 aa11.85□□□□□ -0.51
ACTN1-208ENST00000553370 RNF180Q86T96 592 aa11.85□□□□□ -0.51
ACTN1-208ENST00000553370 SIRT2Q8IXJ6 389 aa11.85□□□□□ -0.51
ACTN1-208ENST00000553370 MS4A3Q96HJ5 214 aa11.85□□□□□ -0.51
ACTN1-208ENST00000553370 FAM161BQ96MY7 647 aa11.85□□□□□ -0.51
ACTN1-208ENST00000553370 ZNF287Q9HBT7 754 aa11.85□□□□□ -0.51
ACTN1-208ENST00000553370 XPNPEP3Q9NQH7 507 aa11.85□□□□□ -0.51
ACTN1-208ENST00000553370 ECHDC1Q9NTX5 307 aa11.85□□□□□ -0.51
ACTN1-208ENST00000553370 FAM47AQ5JRC9 791 aa11.84□□□□□ -0.51
ACTN1-208ENST00000553370 CTR9Q6PD62 1173 aa11.84□□□□□ -0.51
ACTN1-208ENST00000553370 SLC39A5Q6ZMH5 540 aa11.84□□□□□ -0.51
ACTN1-208ENST00000553370 GPIHBP1Q8IV16 184 aa11.84□□□□□ -0.51
ACTN1-208ENST00000553370 DDX11Q96FC9 970 aa11.84□□□□□ -0.51
ACTN1-208ENST00000553370 SLF1Q9BQI6 1058 aa11.84□□□□□ -0.51
ACTN1-208ENST00000553370 FBXO28Q9NVF7 368 aa11.84□□□□□ -0.51
ACTN1-208ENST00000553370 PPP1R9AQ9ULJ8 1098 aa11.84□□□□□ -0.51
ACTN1-208ENST00000553370 TRPC6Q9Y210 931 aa11.84□□□□□ -0.51
ACTN1-208ENST00000553370 STXBP5LQ9Y2K9 1186 aa11.84□□□□□ -0.51
ACTN1-208ENST00000553370 UNC80Q8N2C7 3258 aa11.84□□□□□ -0.51
ACTN1-208ENST00000553370 MYH6P13533 1939 aa11.84□□□□□ -0.51
ACTN1-208ENST00000553370 VWA5AO00534 786 aa11.83□□□□□ -0.52
ACTN1-208ENST00000553370 CLCN6P51797 869 aa11.83□□□□□ -0.52
ACTN1-208ENST00000553370 IKQ13123 557 aaPredicted RBP11.83□□□□□ -0.52
ACTN1-208ENST00000553370 LRRC41Q15345 812 aa11.83□□□□□ -0.52
ACTN1-208ENST00000553370 SNRNP48Q6IEG0 339 aaKnown RBP11.83□□□□□ -0.52
ACTN1-208ENST00000553370 RIOX2Q8IUF8 465 aa11.83□□□□□ -0.52
ACTN1-208ENST00000553370 NUP88Q99567 741 aaPredicted RBP11.83□□□□□ -0.52
ACTN1-208ENST00000553370 TINF2Q9BSI4 451 aa11.83□□□□□ -0.52
ACTN1-208ENST00000553370 TEX13BQ9BXU2 312 aa11.83□□□□□ -0.52
ACTN1-208ENST00000553370 PUS7LQ9H0K6 701 aaKnown RBP11.83□□□□□ -0.52
ACTN1-208ENST00000553370 MTMR10Q9NXD2 777 aa11.83□□□□□ -0.52
ACTN1-208ENST00000553370 ZHX1Q9UKY1 873 aaPredicted RBP11.83□□□□□ -0.52
ACTN1-208ENST00000553370 PQBP1O60828 265 aaKnown RBP11.82□□□□□ -0.52
ACTN1-208ENST00000553370 ZBED4O75132 1171 aa11.82□□□□□ -0.52
ACTN1-208ENST00000553370 CHGBP05060 677 aa11.82□□□□□ -0.52
ACTN1-208ENST00000553370 SLC3A2P08195 630 aaKnown RBP11.82□□□□□ -0.52
ACTN1-208ENST00000553370 AKR1A1P14550 325 aa11.82□□□□□ -0.52
ACTN1-208ENST00000553370 GNAT2P19087 354 aa11.82□□□□□ -0.52
ACTN1-208ENST00000553370 MLLT3P42568 568 aaPredicted RBP11.82□□□□□ -0.52
ACTN1-208ENST00000553370 ZNF444Q8N0Y2 327 aaPredicted RBP11.82□□□□□ -0.52
ACTN1-208ENST00000553370 CPXCR1Q8N123 301 aa11.82□□□□□ -0.52
ACTN1-208ENST00000553370 APPBP2Q92624 585 aa11.82□□□□□ -0.52
ACTN1-208ENST00000553370 BADQ92934 168 aa11.82□□□□□ -0.52
ACTN1-208ENST00000553370 KIFC2Q96AC6 838 aa11.82□□□□□ -0.52
ACTN1-208ENST00000553370 NACAP1Q9BZK3 213 aa11.82□□□□□ -0.52
ACTN1-208ENST00000553370 GPHNQ9NQX3 736 aaPredicted RBP11.82□□□□□ -0.52
ACTN1-208ENST00000553370 NRBP1Q9UHY1 535 aa11.82□□□□□ -0.52
ACTN1-208ENST00000553370 SMIM22K7EJ46 135 aa11.81□□□□□ -0.52
ACTN1-208ENST00000553370 RNF113AO15541 343 aaKnown RBP11.81□□□□□ -0.52
ACTN1-208ENST00000553370 GPAA1O43292 621 aa11.81□□□□□ -0.52
ACTN1-208ENST00000553370 PGK1P00558 417 aa11.81□□□□□ -0.52
ACTN1-208ENST00000553370 ZFYP08048 801 aaPredicted RBP11.81□□□□□ -0.52
ACTN1-208ENST00000553370 CLTBP09497 229 aa11.81□□□□□ -0.52
ACTN1-208ENST00000553370 RAG1P15918 1043 aa11.81□□□□□ -0.52
ACTN1-208ENST00000553370 TSHZ3Q63HK5 1081 aa11.81□□□□□ -0.52
ACTN1-208ENST00000553370 SIAH1Q8IUQ4 282 aa11.81□□□□□ -0.52
ACTN1-208ENST00000553370 ANKRD35Q8N283 1001 aa11.81□□□□□ -0.52
ACTN1-208ENST00000553370 KRI1Q8N9T8 703 aaKnown RBP11.81□□□□□ -0.52
ACTN1-208ENST00000553370 KBTBD3Q8NAB2 608 aa11.81□□□□□ -0.52
ACTN1-208ENST00000553370 SP7Q8TDD2 431 aaPredicted RBP11.81□□□□□ -0.52
ACTN1-208ENST00000553370 VTI1AQ96AJ9 217 aa11.81□□□□□ -0.52
ACTN1-208ENST00000553370 SPC25Q9HBM1 224 aa11.81□□□□□ -0.52
ACTN1-208ENST00000553370 PDLIM7Q9NR12 457 aa11.81□□□□□ -0.52
ACTN1-208ENST00000553370 CLIP2Q9UDT6 1046 aa11.81□□□□□ -0.52
ACTN1-208ENST00000553370 ERC2O15083 957 aa11.8□□□□□ -0.52
ACTN1-208ENST00000553370 PRDM1O75626 825 aa11.8□□□□□ -0.52
ACTN1-208ENST00000553370 NDUFB10O96000 172 aa11.8□□□□□ -0.52
ACTN1-208ENST00000553370 TSPY3P0CV98 308 aa11.8□□□□□ -0.52
ACTN1-208ENST00000553370 TSPY8P0CW00 308 aa11.8□□□□□ -0.52
ACTN1-208ENST00000553370 RASA1P20936 1047 aa11.8□□□□□ -0.52
ACTN1-208ENST00000553370 TLE2Q04725 743 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms