RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 IRX6P78412 446 aaPredicted RBP15.33■□□□□ 0.04
ACTN1-207ENST00000553290 KCTD2Q14681 263 aa15.33■□□□□ 0.04
ACTN1-207ENST00000553290 SNRNP48Q6IEG0 339 aaKnown RBP15.33■□□□□ 0.04
ACTN1-207ENST00000553290 CHURC1Q8WUH1 139 aa15.33■□□□□ 0.04
ACTN1-207ENST00000553290 KIFC2Q96AC6 838 aa15.33■□□□□ 0.04
ACTN1-207ENST00000553290 GMCL1Q96IK5 515 aa15.33■□□□□ 0.04
ACTN1-207ENST00000553290 IL17RBQ9NRM6 502 aa15.33■□□□□ 0.04
ACTN1-207ENST00000553290 TOMM22Q9NS69 142 aa15.33■□□□□ 0.04
ACTN1-207ENST00000553290 DIS3Q9Y2L1 958 aaKnown RBP15.33■□□□□ 0.04
ACTN1-207ENST00000553290 TACC3Q9Y6A5 838 aa15.33■□□□□ 0.04
ACTN1-207ENST00000553290 CEP290O15078 2479 aa15.33■□□□□ 0.04
ACTN1-207ENST00000553290 EVI5O60447 810 aa15.32■□□□□ 0.04
ACTN1-207ENST00000553290 CYBAP13498 195 aa15.32■□□□□ 0.04
ACTN1-207ENST00000553290 CNGA1P29973 690 aa15.32■□□□□ 0.04
ACTN1-207ENST00000553290 NOVP48745 357 aa15.32■□□□□ 0.04
ACTN1-207ENST00000553290 STAT2P52630 851 aa15.32■□□□□ 0.04
ACTN1-207ENST00000553290 CWC27Q6UX04 472 aaKnown RBP15.32■□□□□ 0.04
ACTN1-207ENST00000553290 FAM160B2Q86V87 743 aa15.32■□□□□ 0.04
ACTN1-207ENST00000553290 MAML3Q96JK9 1138 aa15.32■□□□□ 0.04
ACTN1-207ENST00000553290 C11orf49Q9H6J7 331 aa15.32■□□□□ 0.04
ACTN1-207ENST00000553290 SLC38A10Q9HBR0 1119 aa15.32■□□□□ 0.04
ACTN1-207ENST00000553290 DDX20Q9UHI6 824 aaKnown RBP15.32■□□□□ 0.04
ACTN1-207ENST00000553290 TMEM232C9JQI7 657 aa15.31■□□□□ 0.04
ACTN1-207ENST00000553290 NMT2O60551 498 aa15.31■□□□□ 0.04
ACTN1-207ENST00000553290 PLA2G6O60733 806 aa15.31■□□□□ 0.04
ACTN1-207ENST00000553290 SLC1A4P43007 532 aa15.31■□□□□ 0.04
ACTN1-207ENST00000553290 OAZ1P54368 228 aa15.31■□□□□ 0.04
ACTN1-207ENST00000553290 RRP12Q5JTH9 1297 aaKnown RBP15.31■□□□□ 0.04
ACTN1-207ENST00000553290 AKNAD1Q5T1N1 836 aa15.31■□□□□ 0.04
ACTN1-207ENST00000553290 MFSD6Q6ZSS7 791 aa15.31■□□□□ 0.04
ACTN1-207ENST00000553290 CPXCR1Q8N123 301 aa15.31■□□□□ 0.04
ACTN1-207ENST00000553290 STAG1Q8WVM7 1258 aa15.31■□□□□ 0.04
ACTN1-207ENST00000553290 RNF41Q9H4P4 317 aaPredicted RBP15.31■□□□□ 0.04
ACTN1-207ENST00000553290 TCP11L1Q9NUJ3 509 aa15.31■□□□□ 0.04
ACTN1-207ENST00000553290 ISY1Q9ULR0 285 aaKnown RBP15.31■□□□□ 0.04
ACTN1-207ENST00000553290 FRMPD3Q5JV73 1810 aa15.31■□□□□ 0.04
ACTN1-207ENST00000553290 MCCP23508 829 aa15.3■□□□□ 0.04
ACTN1-207ENST00000553290 PDE4AP27815 886 aa15.3■□□□□ 0.04
ACTN1-207ENST00000553290 NT5C2P49902 561 aa15.3■□□□□ 0.04
ACTN1-207ENST00000553290 HAND2P61296 217 aa15.3■□□□□ 0.04
ACTN1-207ENST00000553290 IKQ13123 557 aaPredicted RBP15.3■□□□□ 0.04
ACTN1-207ENST00000553290 ZNF792Q3KQV3 632 aa15.3■□□□□ 0.04
ACTN1-207ENST00000553290 HABP4Q5JVS0 413 aaKnown RBP15.3■□□□□ 0.04
ACTN1-207ENST00000553290 RCSD1Q6JBY9 416 aa15.3■□□□□ 0.04
ACTN1-207ENST00000553290 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.3■□□□□ 0.04
ACTN1-207ENST00000553290 TRPV1Q8NER1 839 aa15.3■□□□□ 0.04
ACTN1-207ENST00000553290 RAVER2Q9HCJ3 691 aaKnown RBP15.3■□□□□ 0.04
ACTN1-207ENST00000553290 FBXO40Q9UH90 709 aa15.3■□□□□ 0.04
ACTN1-207ENST00000553290 NRBP1Q9UHY1 535 aa15.3■□□□□ 0.04
ACTN1-207ENST00000553290 PLXNA1Q9UIW2 1896 aa15.3■□□□□ 0.04
ACTN1-207ENST00000553290 RIPK3Q9Y572 518 aa15.3■□□□□ 0.04
ACTN1-207ENST00000553290 ZNF213O14771 459 aa15.29■□□□□ 0.04
ACTN1-207ENST00000553290 SEPT4O43236 478 aa15.29■□□□□ 0.04
ACTN1-207ENST00000553290 SLC34A2O95436 690 aa15.29■□□□□ 0.04
ACTN1-207ENST00000553290 PGK2P07205 417 aa15.29■□□□□ 0.04
ACTN1-207ENST00000553290 COL6A1P12109 1028 aa15.29■□□□□ 0.04
ACTN1-207ENST00000553290 SLC4A3P48751 1232 aa15.29■□□□□ 0.04
ACTN1-207ENST00000553290 TTC22Q5TAA0 569 aa15.29■□□□□ 0.04
ACTN1-207ENST00000553290 CHST13Q8NET6 341 aa15.29■□□□□ 0.04
ACTN1-207ENST00000553290 DDX11Q96FC9 970 aa15.29■□□□□ 0.04
ACTN1-207ENST00000553290 TTC14Q96N46 770 aa15.29■□□□□ 0.04
ACTN1-207ENST00000553290 TINF2Q9BSI4 451 aa15.29■□□□□ 0.04
ACTN1-207ENST00000553290 DSCC1Q9BVC3 393 aa15.29■□□□□ 0.04
ACTN1-207ENST00000553290 ALPK3Q96L96 1907 aa15.29■□□□□ 0.04
ACTN1-207ENST00000553290 PFASO15067 1338 aa15.28■□□□□ 0.04
ACTN1-207ENST00000553290 TOP1P11387 765 aaKnown RBP15.28■□□□□ 0.04
ACTN1-207ENST00000553290 KCTD1Q719H9 257 aa15.28■□□□□ 0.04
ACTN1-207ENST00000553290 TBC1D10CQ8IV04 446 aa15.28■□□□□ 0.04
ACTN1-207ENST00000553290 MSL3Q8N5Y2 521 aaKnown RBP15.28■□□□□ 0.04
ACTN1-207ENST00000553290 DCAF4Q8WV16 495 aa15.28■□□□□ 0.04
ACTN1-207ENST00000553290 ESR2Q92731 530 aa15.28■□□□□ 0.04
ACTN1-207ENST00000553290 COLQQ9Y215 455 aaPredicted RBP15.28■□□□□ 0.04
ACTN1-207ENST00000553290 DNAJC25-GNG10A0A024R161 153 aa15.27■□□□□ 0.04
ACTN1-207ENST00000553290 PRAMEF19Q5SWL8 479 aa15.27■□□□□ 0.04
ACTN1-207ENST00000553290 ANKRD35Q8N283 1001 aa15.27■□□□□ 0.04
ACTN1-207ENST00000553290 ARRDC4Q8NCT1 418 aa15.27■□□□□ 0.04
ACTN1-207ENST00000553290 TMEM47Q9BQJ4 181 aa15.27■□□□□ 0.04
ACTN1-207ENST00000553290 CTNNA3Q9UI47 895 aa15.27■□□□□ 0.04
ACTN1-207ENST00000553290 LAMA4Q16363 1823 aa15.27■□□□□ 0.03
ACTN1-207ENST00000553290 DNM1LO00429 736 aa15.26■□□□□ 0.03
ACTN1-207ENST00000553290 GSPT1P15170 499 aaKnown RBP15.26■□□□□ 0.03
ACTN1-207ENST00000553290 IMMTQ16891 758 aaKnown RBP15.26■□□□□ 0.03
ACTN1-207ENST00000553290 CCDC96Q2M329 555 aa15.26■□□□□ 0.03
ACTN1-207ENST00000553290 TKFCQ3LXA3 575 aa15.26■□□□□ 0.03
ACTN1-207ENST00000553290 CCDC178Q5BJE1 867 aa15.26■□□□□ 0.03
ACTN1-207ENST00000553290 CHRDL2Q6WN34 429 aa15.26■□□□□ 0.03
ACTN1-207ENST00000553290 ZNF467Q7Z7K2 595 aaPredicted RBP15.26■□□□□ 0.03
ACTN1-207ENST00000553290 CHMP4CQ96CF2 233 aa15.26■□□□□ 0.03
ACTN1-207ENST00000553290 PRR12Q9ULL5 1215 aa15.26■□□□□ 0.03
ACTN1-207ENST00000553290 MTMR7Q9Y216 660 aa15.26■□□□□ 0.03
ACTN1-207ENST00000553290 ZNF536O15090 1300 aa15.25■□□□□ 0.03
ACTN1-207ENST00000553290 NEDD4P46934 1319 aa15.25■□□□□ 0.03
ACTN1-207ENST00000553290 RAD50Q92878 1312 aa15.25■□□□□ 0.03
ACTN1-207ENST00000553290 SYNGAP1Q96PV0 1343 aa15.25■□□□□ 0.03
ACTN1-207ENST00000553290 DNAH12Q6ZR08 3092 aa15.25■□□□□ 0.03
ACTN1-207ENST00000553290 MAMDC4Q6UXC1 1216 aa15.25■□□□□ 0.03
ACTN1-207ENST00000553290 BTNL9Q6UXG8 535 aa15.25■□□□□ 0.03
ACTN1-207ENST00000553290 C7orf61Q8IZ16 206 aa15.25■□□□□ 0.03
ACTN1-207ENST00000553290 RUFY2Q8WXA3 655 aa15.25■□□□□ 0.03
ACTN1-207ENST00000553290 SENP6Q9GZR1 1112 aaPredicted RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms